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1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1.starfusion.starfusion.fusion_predictions.filter_summary.txt
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0016/A23T55JLT4/nfcore_rnafusion__73d51683--20260607-225254/starfusion/1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1.starfusion.starfusion.fusion_predictions.filter_summary.txt
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1.2 KB
Workflow Run
dev_rna_exp0016-73d51683
Published
Jun 08, 2026 9:37 AM

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STAR-FUSION FILTERING SUMMARY
================================================================================

Input file: 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1.starfusion.starfusion.fusion_predictions.tsv
Blacklist: blacklist_hg38_GRCh38_v2.4.0.tsv.gz
Filter config: starfusion_filter_config.yaml
Output file: 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1.starfusion.starfusion.fusion_predictions.filter_summary.tsv

Total fusions: 340
Pass (CALL=1): 29 (8.5%)
Fail (CALL=0): 311 (91.5%)

Blacklist Flagging:
  Total blacklisted: 117
  All blacklisted fusions have CALL=0

Failure Reasons:
  Read count too low: 1 < 8: 100
  Excluded SpliceType: INCL_NON_REF_SPLICE: 64
  Blacklisted: 55
  Blacklisted; aih_curated_blacklist score(3): 37
  aih_curated_blacklist score(3): 21
  Read count too low: 2 < 8: 10
  Excluded annotation pattern: GTEx_recurrent_StarF2019: 6
  Read count too low: 6 < 8: 4
  Read count too low: 5 < 8: 3
  Read count too low: 3 < 8: 3
  Read count too low: 7 < 8: 2
  aih_curated_blacklist score(5): 2
  Read count too low: 4 < 8: 2
  aih_curated_blacklist score(6): 1
  aih_curated_blacklist score(4): 1

Breakdown by SpliceType:
  INCL_NON_REF_SPLICE: 6 pass, 160 fail (total: 166)
  ONLY_REF_SPLICE: 23 pass, 151 fail (total: 174)