AIH curated blacklist: matched 5 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 106
Pass (FILTER=PASS): 10 (9.4%)
Fail (FILTER=FAIL): 96 (90.6%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 5
All 5 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high): 28
confidence_below_min(medium<high): 16
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 7
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 3
total_reads_below_min(5.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 1
total_reads_below_min(7.0<8.0): 1
confidence_below_min(low<high);aih_curated_blacklist: 1
Breakdown by confidence:
high: 10 pass, 3 fail (total: 13)
low: 0 pass, 59 fail (total: 59)
medium: 0 pass, 34 fail (total: 34)
Arriba filter: 106 rows -> 10 PASS; wrote 1173_G2E_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filtered.tsv and 1173_G2E_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 1173_G2E_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filter_summary.txt