.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/548cb31a1aedc8e24d6c21bd197f69/.command.log
Size: 724 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/548cb31a1aedc8e24d6c21bd197f69/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/00/d6f1958fbb2e8686869dfe78c33df4/1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1.md.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/26/548cb31a1aedc8e24d6c21bd197f69/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/00/d6f1958fbb2e8686869dfe78c33df4/1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1.md.bai
==> STAGING COMPLETE (4 inputs)

+ seqtool saturation -region chr20 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1.md.bam
[W::hts_idx_load3] The index file is older than the data file: 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1.md.bai