Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/07/3aae770c9fa92e7281107b58c4f050/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/07/3aae770c9fa92e7281107b58c4f050/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/19/e032f5fc993650603247198b669c51/1173_HOB_T1_RNA_SLD_01_A23T55JLT4_1_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/19/e032f5fc993650603247198b669c51/1173_HOB_T1_RNA_SLD_01_A23T55JLT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/30/e4b259e378f5deac85287b3e1b8e6c/1173_HOB_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.65tJsMVxNA/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.65tJsMVxNA/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary
-sample contains 294805125 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.65tJsMVxNA/ctat_genome_lib_build_dir  -J /tmp/nxf.65tJsMVxNA/1173_HOB_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction  -O /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.65tJsMVxNA/1173_HOB_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.65tJsMVxNA/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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-building interval tree based on /tmp/nxf.65tJsMVxNA/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[3620000], rate=48000.00/min 
[3630000], rate=48015.87/min 
[3640000], rate=48031.67/min -building interval tree based on /tmp/nxf.65tJsMVxNA/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=19354.84/min 
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[30000], rate=24657.53/min 
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[2680000], rate=34895.83/min 
[2690000], rate=34927.50/min 
[2700000], rate=34959.00/min 
[2710000], rate=35005.38/min 
-building interval tree based on /tmp/nxf.65tJsMVxNA/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=54545.45/min 
[20000], rate=63157.89/min 
[30000], rate=60000.00/min 
[40000], rate=60000.00/min 
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[1880000], rate=29420.97/min 
[1890000], rate=29446.90/min 
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[3100000], rate=39854.30/min 
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[3200000], rate=40514.88/min 
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[3500000], rate=42042.04/min 
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[3600000], rate=42670.88/min 
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[3620000], rate=42798.03/min 
[3630000], rate=42857.14/min [2720000], rate=35028.98/min 
[2730000], rate=35082.46/min 
[2740000], rate=35135.71/min 
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[3600000], rate=37901.39/min 
[3610000], rate=37946.74/min 
[3620000], rate=37985.31/min 
[3630000], rate=38017.11/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.65tJsMVxNA/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
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 4790322.58 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.65tJsMVxNA/1173_HOB_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.65tJsMVxNA/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -3674690.372771
EM: Round [1] log likelihood: -3673878.520170
EM: Round [2] log likelihood: -3673640.761586
EM: Round [3] log likelihood: -3673539.353855
EM: Round [4] log likelihood: -3673486.893982
EM: Round [5] log likelihood: -3673456.936213
EM: Round [6] log likelihood: -3673438.614369
EM: Round [7] log likelihood: -3673426.739311
EM: Round [8] log likelihood: -3673418.640659
EM: Round [9] log likelihood: -3673412.869812
EM: Round [10] log likelihood: -3673408.602684
EM: Round [11] log likelihood: -3673405.348615
EM: Round [12] log likelihood: -3673402.802606
EM: Round [13] log likelihood: -3673400.767384
EM: Round [14] log likelihood: -3673399.110712
EM: Round [15] log likelihood: -3673397.741115
EM: Round [16] log likelihood: -3673396.593549
EM: Round [17] log likelihood: -3673395.620650
EM: Round [18] log likelihood: -3673394.787212
EM: Round [19] log likelihood: -3673394.066590
EM: Round [20] log likelihood: -3673393.438299
EM: Round [21] log likelihood: -3673392.886367
EM: Round [22] log likelihood: -3673392.398185
EM: Round [23] log likelihood: -3673391.963689
EM: Round [24] log likelihood: -3673391.574760
EM: Round [25] log likelihood: -3673391.224791
EM: Round [26] log likelihood: -3673390.908357
EM: Round [27] log likelihood: -3673390.620968
EM: Round [28] log likelihood: -3673390.358884
EM: Round [29] log likelihood: -3673390.118966
EM: Round [30] log likelihood: -3673389.898563
EM: Round [31] log likelihood: -3673389.695424
EM: Round [32] log likelihood: -3673389.507628
EM: Round [33] log likelihood: -3673389.333525
EM: Round [34] log likelihood: -3673389.171691
EM: Round [35] log likelihood: -3673389.020892
EM: Round [36] log likelihood: -3673388.880057
EM: Round [37] log likelihood: -3673388.748245
EM: Round [38] log likelihood: -3673388.624634
EM: Round [39] log likelihood: -3673388.508499
EM: Round [40] log likelihood: -3673388.399197
EM: Round [41] log likelihood: -3673388.296160
EM: Round [42] log likelihood: -3673388.198881
EM: Round [43] log likelihood: -3673388.106907
EM: Round [44] log likelihood: -3673388.019832
EM: Round [45] log likelihood: -3673387.937293
EM: Round [46] log likelihood: -3673387.858960
EM: Round [47] log likelihood: -3673387.784536
EM: Round [48] log likelihood: -3673387.713753
EM: Round [49] log likelihood: -3673387.646364
EM: Round [50] log likelihood: -3673387.582148
EM: Round [51] log likelihood: -3673387.520901
EM: Round [52] log likelihood: -3673387.462437
EM: Round [53] log likelihood: -3673387.406584
EM: Round [54] log likelihood: -3673387.353185
EM: Round [55] log likelihood: -3673387.302097
EM: Round [56] log likelihood: -3673387.253185
EM: Round [57] log likelihood: -3673387.206326
EM: Round [58] log likelihood: -3673387.161405
EM: Round [59] log likelihood: -3673387.118317
EM: Round [60] log likelihood: -3673387.076963
EM: Round [61] log likelihood: -3673387.037251
EM: Round [62] log likelihood: -3673386.999096
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EM: Round [498] log likelihood: -3673385.619835
EM: Round [499] log likelihood: -3673385.619728
EM: Round [500] log likelihood: -3673385.619621
EM: Round [501] log likelihood: -3673385.619515
EM: Round [502] log likelihood: -3673385.619410
EM: Round [503] log likelihood: -3673385.619306
EM: Round [504] log likelihood: -3673385.619203
EM: Round [505] log likelihood: -3673385.619100
EM: Round [506] log likelihood: -3673385.618998
EM: Round [507] log likelihood: -3673385.618897
EM: Round [508] log likelihood: -3673385.618797
EM: Round [509] log likelihood: -3673385.618697
EM: Stopping iterations at round 509 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -3668677.705998
EM: Round [1] log likelihood: -3668038.335733
EM: Round [2] log likelihood: -3667864.410263
EM: Round [3] log likelihood: -3667794.501016
EM: Round [4] log likelihood: -3667759.538554
EM: Round [5] log likelihood: -3667740.016550
EM: Round [6] log likelihood: -3667728.314224
EM: Round [7] log likelihood: -3667720.887865
EM: Round [8] log likelihood: -3667715.937559
EM: Round [9] log likelihood: -3667712.494294
EM: Round [10] log likelihood: -3667710.010426
EM: Round [11] log likelihood: -3667708.162351
EM: Round [12] log likelihood: -3667706.750777
EM: Round [13] log likelihood: -3667705.648223
EM: Round [14] log likelihood: -3667704.770311
EM: Round [15] log likelihood: -3667704.059470
EM: Round [16] log likelihood: -3667703.475366
EM: Round [17] log likelihood: -3667702.989078
EM: Round [18] log likelihood: -3667702.579446
EM: Round [19] log likelihood: -3667702.230714
EM: Round [20] log likelihood: -3667701.930963
EM: Round [21] log likelihood: -3667701.671053
EM: Round [22] log likelihood: -3667701.443887
EM: Round [23] log likelihood: -3667701.243891
EM: Round [24] log likelihood: -3667701.066639
EM: Round [25] log likelihood: -3667700.908588
EM: Round [26] log likelihood: -3667700.766872
EM: Round [27] log likelihood: -3667700.639153
EM: Round [28] log likelihood: -3667700.523512
EM: Round [29] log likelihood: -3667700.418360
EM: Round [30] log likelihood: -3667700.322369
EM: Round [31] log likelihood: -3667700.234429
EM: Round [32] log likelihood: -3667700.153600
EM: Round [33] log likelihood: -3667700.079081
EM: Round [34] log likelihood: -3667700.010190
EM: Round [35] log likelihood: -3667699.946340
EM: Round [36] log likelihood: -3667699.887022
EM: Round [37] log likelihood: -3667699.831796
EM: Round [38] log likelihood: -3667699.780275
EM: Round [39] log likelihood: -3667699.732123
EM: Round [40] log likelihood: -3667699.687040
EM: Round [41] log likelihood: -3667699.644764
EM: Round [42] log likelihood: -3667699.605060
EM: Round [43] log likelihood: -3667699.567719
EM: Round [44] log likelihood: -3667699.532554
EM: Round [45] log likelihood: -3667699.499396
EM: Round [46] log likelihood: -3667699.468096
EM: Round [47] log likelihood: -3667699.438514
EM: Round [48] log likelihood: -3667699.410529
EM: Round [49] log likelihood: -3667699.384026
EM: Round [50] log likelihood: -3667699.358903
EM: Round [51] log likelihood: -3667699.335067
EM: Round [52] log likelihood: -3667699.312431
EM: Round [53] log likelihood: -3667699.290917
EM: Round [54] log likelihood: -3667699.270451
EM: Round [55] log likelihood: -3667699.250969
EM: Round [56] log likelihood: -3667699.232407
EM: Round [57] log likelihood: -3667699.214710
EM: Round [58] log likelihood: -3667699.197825
EM: Round [59] log likelihood: -3667699.181703
EM: Round [60] log likelihood: -3667699.166298
EM: Round [61] log likelihood: -3667699.151570
EM: Round [62] log likelihood: -3667699.137478
EM: Round [63] log likelihood: -3667699.123988
EM: Round [64] log likelihood: -3667699.111064
EM: Round [65] log likelihood: -3667699.098675
EM: Round [66] log likelihood: -3667699.086792
EM: Round [67] log likelihood: -3667699.075387
EM: Round [68] log likelihood: -3667699.064434
EM: Round [69] log likelihood: -3667699.053909
EM: Round [70] log likelihood: -3667699.043790
EM: Round [71] log likelihood: -3667699.034055
EM: Round [72] log likelihood: -3667699.024684
EM: Round [73] log likelihood: -3667699.015659
EM: Round [74] log likelihood: -3667699.006961
EM: Round [75] log likelihood: -3667698.998576
EM: Round [76] log likelihood: -3667698.990486
EM: Round [77] log likelihood: -3667698.982677
EM: Round [78] log likelihood: -3667698.975135
EM: Round [79] log likelihood: -3667698.967848
EM: Round [80] log likelihood: -3667698.960803
EM: Round [81] log likelihood: -3667698.953989
EM: Round [82] log likelihood: -3667698.947394
EM: Round [83] log likelihood: -3667698.941009
EM: Round [84] log likelihood: -3667698.934823
EM: Round [85] log likelihood: -3667698.928827
EM: Round [86] log likelihood: -3667698.923014
EM: Round [87] log likelihood: -3667698.917373
EM: Round [88] log likelihood: -3667698.911898
EM: Round [89] log likelihood: -3667698.906581
EM: Round [90] log likelihood: -3667698.901416
EM: Round [91] log likelihood: -3667698.896395
EM: Round [92] log likelihood: -3667698.891512
EM: Round [93] log likelihood: -3667698.886762
EM: Round [94] log likelihood: -3667698.882138
EM: Round [95] log likelihood: -3667698.877636
EM: Round [96] log likelihood: -3667698.873250
EM: Round [97] log likelihood: -3667698.868975
EM: Round [98] log likelihood: -3667698.864807
EM: Round [99] log likelihood: -3667698.860742
EM: Round [100] log likelihood: -3667698.856775
EM: Round [101] log likelihood: -3667698.852903
EM: Round [102] log likelihood: -3667698.849121
EM: Round [103] log likelihood: -3667698.845426
EM: Round [104] log likelihood: -3667698.841815
EM: Round [105] log likelihood: -3667698.838285
EM: Round [106] log likelihood: -3667698.834832
EM: Round [107] log likelihood: -3667698.831453
EM: Round [108] log likelihood: -3667698.828147
EM: Round [109] log likelihood: -3667698.824909
EM: Round [110] log likelihood: -3667698.821738
EM: Round [111] log likelihood: -3667698.818631
EM: Round [112] log likelihood: -3667698.815586
EM: Round [113] log likelihood: -3667698.812600
EM: Round [114] log likelihood: -3667698.809672
EM: Round [115] log likelihood: -3667698.806800
EM: Round [116] log likelihood: -3667698.803982
EM: Round [117] log likelihood: -3667698.801215
EM: Round [118] log likelihood: -3667698.798498
EM: Round [119] log likelihood: -3667698.795830
EM: Round [120] log likelihood: -3667698.793209
EM: Round [121] log likelihood: -3667698.790633
EM: Round [122] log likelihood: -3667698.788101
EM: Round [123] log likelihood: -3667698.785611
EM: Round [124] log likelihood: -3667698.783163
EM: Round [125] log likelihood: -3667698.780755
EM: Round [126] log likelihood: -3667698.778385
EM: Round [127] log likelihood: -3667698.776053
EM: Round [128] log likelihood: -3667698.773757
EM: Round [129] log likelihood: -3667698.771497
EM: Round [130] log likelihood: -3667698.769271
EM: Round [131] log likelihood: -3667698.767078
EM: Round [132] log likelihood: -3667698.764918
EM: Round [133] log likelihood: -3667698.762789
EM: Round [134] log likelihood: -3667698.760691
EM: Round [135] log likelihood: -3667698.758623
EM: Round [136] log likelihood: -3667698.756584
EM: Round [137] log likelihood: -3667698.754573
EM: Round [138] log likelihood: -3667698.752590
EM: Round [139] log likelihood: -3667698.750634
EM: Round [140] log likelihood: -3667698.748703
EM: Round [141] log likelihood: -3667698.746798
EM: Round [142] log likelihood: -3667698.744918
EM: Round [143] log likelihood: -3667698.743063
EM: Round [144] log likelihood: -3667698.741231
EM: Round [145] log likelihood: -3667698.739422
EM: Round [146] log likelihood: -3667698.737635
EM: Round [147] log likelihood: -3667698.735871
EM: Round [148] log likelihood: -3667698.734128
EM: Round [149] log likelihood: -3667698.732407
EM: Round [150] log likelihood: -3667698.730706
EM: Round [151] log likelihood: -3667698.729025
EM: Round [152] log likelihood: -3667698.727364
EM: Round [153] log likelihood: -3667698.725722
EM: Round [154] log likelihood: -3667698.724099
EM: Round [155] log likelihood: -3667698.722495
EM: Round [156] log likelihood: -3667698.720909
EM: Round [157] log likelihood: -3667698.719341
EM: Round [158] log likelihood: -3667698.717790
EM: Round [159] log likelihood: -3667698.716256
EM: Round [160] log likelihood: -3667698.714739
EM: Round [161] log likelihood: -3667698.713239
EM: Round [162] log likelihood: -3667698.711755
EM: Round [163] log likelihood: -3667698.710286
EM: Round [164] log likelihood: -3667698.708834
EM: Round [165] log likelihood: -3667698.707396
EM: Round [166] log likelihood: -3667698.705973
EM: Round [167] log likelihood: -3667698.704566
EM: Round [168] log likelihood: -3667698.703173
EM: Round [169] log likelihood: -3667698.701794
EM: Round [170] log likelihood: -3667698.700429
EM: Round [171] log likelihood: -3667698.699078
EM: Round [172] log likelihood: -3667698.697740
EM: Round [173] log likelihood: -3667698.696416
EM: Round [174] log likelihood: -3667698.695105
EM: Round [175] log likelihood: -3667698.693807
EM: Round [176] log likelihood: -3667698.692522
EM: Round [177] log likelihood: -3667698.691249
EM: Round [178] log likelihood: -3667698.689989
EM: Round [179] log likelihood: -3667698.688740
EM: Round [180] log likelihood: -3667698.687504
EM: Round [181] log likelihood: -3667698.686280
EM: Round [182] log likelihood: -3667698.685067
EM: Round [183] log likelihood: -3667698.683866
EM: Round [184] log likelihood: -3667698.682676
EM: Round [185] log likelihood: -3667698.681497
EM: Round [186] log likelihood: -3667698.680329
EM: Round [187] log likelihood: -3667698.679172
EM: Round [188] log likelihood: -3667698.678026
EM: Round [189] log likelihood: -3667698.676890
EM: Round [190] log likelihood: -3667698.675765
EM: Round [191] log likelihood: -3667698.674650
EM: Round [192] log likelihood: -3667698.673545
EM: Round [193] log likelihood: -3667698.672451
EM: Round [194] log likelihood: -3667698.671366
EM: Round [195] log likelihood: -3667698.670291
EM: Round [196] log likelihood: -3667698.669225
EM: Round [197] log likelihood: -3667698.668169
EM: Round [198] log likelihood: -3667698.667123
EM: Round [199] log likelihood: -3667698.666086
EM: Round [200] log likelihood: -3667698.665058
EM: Round [201] log likelihood: -3667698.664039
EM: Round [202] log likelihood: -3667698.663029
EM: Round [203] log likelihood: -3667698.662028
EM: Round [204] log likelihood: -3667698.661036
EM: Round [205] log likelihood: -3667698.660052
EM: Round [206] log likelihood: -3667698.659077
EM: Round [207] log likelihood: -3667698.658110
EM: Round [208] log likelihood: -3667698.657152
EM: Round [209] log likelihood: -3667698.656202
EM: Round [210] log likelihood: -3667698.655260
EM: Round [211] log likelihood: -3667698.654327
EM: Round [212] log likelihood: -3667698.653401
EM: Round [213] log likelihood: -3667698.652483
EM: Round [214] log likelihood: -3667698.651573
EM: Round [215] log likelihood: -3667698.650671
EM: Round [216] log likelihood: -3667698.649777
EM: Round [217] log likelihood: -3667698.648890
EM: Round [218] log likelihood: -3667698.648010
EM: Round [219] log likelihood: -3667698.647138
EM: Round [220] log likelihood: -3667698.646274
EM: Round [221] log likelihood: -3667698.645416
EM: Round [222] log likelihood: -3667698.644566
EM: Round [223] log likelihood: -3667698.643723
EM: Round [224] log likelihood: -3667698.642887
EM: Round [225] log likelihood: -3667698.642058
EM: Round [226] log likelihood: -3667698.641236
EM: Round [227] log likelihood: -3667698.640421
EM: Round [228] log likelihood: -3667698.639612
EM: Round [229] log likelihood: -3667698.638811
EM: Round [230] log likelihood: -3667698.638015
EM: Round [231] log likelihood: -3667698.637227
EM: Round [232] log likelihood: -3667698.636445
EM: Round [233] log likelihood: -3667698.635669
EM: Round [234] log likelihood: -3667698.634900
EM: Round [235] log likelihood: -3667698.634137
EM: Round [236] log likelihood: -3667698.633380
EM: Round [237] log likelihood: -3667698.632630
EM: Round [238] log likelihood: -3667698.631886
EM: Round [239] log likelihood: -3667698.631147
EM: Round [240] log likelihood: -3667698.630415
EM: Round [241] log likelihood: -3667698.629689
EM: Round [242] log likelihood: -3667698.628968
EM: Round [243] log likelihood: -3667698.628254
EM: Round [244] log likelihood: -3667698.627545
EM: Round [245] log likelihood: -3667698.626842
EM: Round [246] log likelihood: -3667698.626145
EM: Round [247] log likelihood: -3667698.625453
EM: Round [248] log likelihood: -3667698.624767
EM: Round [249] log likelihood: -3667698.624087
EM: Round [250] log likelihood: -3667698.623412
EM: Round [251] log likelihood: -3667698.622742
EM: Round [252] log likelihood: -3667698.622078
EM: Round [253] log likelihood: -3667698.621419
EM: Round [254] log likelihood: -3667698.620765
EM: Round [255] log likelihood: -3667698.620117
EM: Round [256] log likelihood: -3667698.619474
EM: Round [257] log likelihood: -3667698.618836
EM: Round [258] log likelihood: -3667698.618203
EM: Round [259] log likelihood: -3667698.617575
EM: Round [260] log likelihood: -3667698.616952
EM: Round [261] log likelihood: -3667698.616334
EM: Round [262] log likelihood: -3667698.615722
EM: Round [263] log likelihood: -3667698.615113
EM: Round [264] log likelihood: -3667698.614510
EM: Round [265] log likelihood: -3667698.613912
EM: Round [266] log likelihood: -3667698.613318
EM: Round [267] log likelihood: -3667698.612729
EM: Round [268] log likelihood: -3667698.612145
EM: Round [269] log likelihood: -3667698.611565
EM: Round [270] log likelihood: -3667698.610990
EM: Round [271] log likelihood: -3667698.610419
EM: Round [272] log likelihood: -3667698.609853
EM: Round [273] log likelihood: -3667698.609291
EM: Round [274] log likelihood: -3667698.608734
EM: Round [275] log likelihood: -3667698.608181
EM: Round [276] log likelihood: -3667698.607633
EM: Round [277] log likelihood: -3667698.607089
EM: Round [278] log likelihood: -3667698.606549
EM: Round [279] log likelihood: -3667698.606013
EM: Round [280] log likelihood: -3667698.605482
EM: Round [281] log likelihood: -3667698.604955
EM: Round [282] log likelihood: -3667698.604432
EM: Round [283] log likelihood: -3667698.603913
EM: Round [284] log likelihood: -3667698.603398
EM: Round [285] log likelihood: -3667698.602887
EM: Round [286] log likelihood: -3667698.602380
EM: Round [287] log likelihood: -3667698.601877
EM: Round [288] log likelihood: -3667698.601378
EM: Round [289] log likelihood: -3667698.600882
EM: Round [290] log likelihood: -3667698.600391
EM: Round [291] log likelihood: -3667698.599904
EM: Round [292] log likelihood: -3667698.599420
EM: Round [293] log likelihood: -3667698.598940
EM: Round [294] log likelihood: -3667698.598464
EM: Round [295] log likelihood: -3667698.597991
EM: Round [296] log likelihood: -3667698.597523
EM: Round [297] log likelihood: -3667698.597057
EM: Round [298] log likelihood: -3667698.596596
EM: Round [299] log likelihood: -3667698.596138
EM: Round [300] log likelihood: -3667698.595683
EM: Round [301] log likelihood: -3667698.595232
EM: Round [302] log likelihood: -3667698.594785
EM: Round [303] log likelihood: -3667698.594341
EM: Round [304] log likelihood: -3667698.593900
EM: Round [305] log likelihood: -3667698.593463
EM: Round [306] log likelihood: -3667698.593030
EM: Round [307] log likelihood: -3667698.592599
EM: Round [308] log likelihood: -3667698.592172
EM: Round [309] log likelihood: -3667698.591748
EM: Round [310] log likelihood: -3667698.591328
EM: Round [311] log likelihood: -3667698.590910
EM: Round [312] log likelihood: -3667698.590496
EM: Round [313] log likelihood: -3667698.590085
EM: Round [314] log likelihood: -3667698.589678
EM: Round [315] log likelihood: -3667698.589273
EM: Round [316] log likelihood: -3667698.588872
EM: Round [317] log likelihood: -3667698.588473
EM: Round [318] log likelihood: -3667698.588078
EM: Round [319] log likelihood: -3667698.587685
EM: Round [320] log likelihood: -3667698.587296
EM: Round [321] log likelihood: -3667698.586910
EM: Round [322] log likelihood: -3667698.586526
EM: Round [323] log likelihood: -3667698.586146
EM: Round [324] log likelihood: -3667698.585769
EM: Round [325] log likelihood: -3667698.585394
EM: Round [326] log likelihood: -3667698.585022
EM: Round [327] log likelihood: -3667698.584653
EM: Round [328] log likelihood: -3667698.584287
EM: Round [329] log likelihood: -3667698.583924
EM: Round [330] log likelihood: -3667698.583563
EM: Round [331] log likelihood: -3667698.583205
EM: Round [332] log likelihood: -3667698.582850
EM: Round [333] log likelihood: -3667698.582498
EM: Round [334] log likelihood: -3667698.582148
EM: Round [335] log likelihood: -3667698.581801
EM: Round [336] log likelihood: -3667698.581457
EM: Round [337] log likelihood: -3667698.581115
EM: Round [338] log likelihood: -3667698.580776
EM: Round [339] log likelihood: -3667698.580440
EM: Round [340] log likelihood: -3667698.580106
EM: Round [341] log likelihood: -3667698.579774
EM: Round [342] log likelihood: -3667698.579445
EM: Round [343] log likelihood: -3667698.579119
EM: Round [344] log likelihood: -3667698.578795
EM: Round [345] log likelihood: -3667698.578473
EM: Round [346] log likelihood: -3667698.578154
EM: Round [347] log likelihood: -3667698.577838
EM: Round [348] log likelihood: -3667698.577523
EM: Round [349] log likelihood: -3667698.577211
EM: Round [350] log likelihood: -3667698.576902
EM: Round [351] log likelihood: -3667698.576595
EM: Round [352] log likelihood: -3667698.576290
EM: Round [353] log likelihood: -3667698.575987
EM: Round [354] log likelihood: -3667698.575687
EM: Round [355] log likelihood: -3667698.575389
EM: Round [356] log likelihood: -3667698.575093
EM: Round [357] log likelihood: -3667698.574800
EM: Round [358] log likelihood: -3667698.574509
EM: Round [359] log likelihood: -3667698.574220
EM: Round [360] log likelihood: -3667698.573933
EM: Round [361] log likelihood: -3667698.573648
EM: Round [362] log likelihood: -3667698.573365
EM: Round [363] log likelihood: -3667698.573085
EM: Round [364] log likelihood: -3667698.572807
EM: Round [365] log likelihood: -3667698.572530
EM: Round [366] log likelihood: -3667698.572256
EM: Round [367] log likelihood: -3667698.571984
EM: Round [368] log likelihood: -3667698.571714
EM: Round [369] log likelihood: -3667698.571446
EM: Round [370] log likelihood: -3667698.571180
EM: Round [371] log likelihood: -3667698.570916
EM: Round [372] log likelihood: -3667698.570654
EM: Round [373] log likelihood: -3667698.570394
EM: Round [374] log likelihood: -3667698.570136
EM: Round [375] log likelihood: -3667698.569880
EM: Round [376] log likelihood: -3667698.569625
EM: Round [377] log likelihood: -3667698.569373
EM: Round [378] log likelihood: -3667698.569123
EM: Round [379] log likelihood: -3667698.568874
EM: Round [380] log likelihood: -3667698.568627
EM: Round [381] log likelihood: -3667698.568383
EM: Round [382] log likelihood: -3667698.568140
EM: Round [383] log likelihood: -3667698.567898
EM: Round [384] log likelihood: -3667698.567659
EM: Round [385] log likelihood: -3667698.567421
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EM: Round [387] log likelihood: -3667698.566952
EM: Round [388] log likelihood: -3667698.566719
EM: Round [389] log likelihood: -3667698.566489
EM: Round [390] log likelihood: -3667698.566260
EM: Round [391] log likelihood: -3667698.566033
EM: Round [392] log likelihood: -3667698.565807
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EM: Round [394] log likelihood: -3667698.565362
EM: Round [395] log likelihood: -3667698.565141
EM: Round [396] log likelihood: -3667698.564922
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EM: Round [398] log likelihood: -3667698.564490
EM: Round [399] log likelihood: -3667698.564276
EM: Round [400] log likelihood: -3667698.564064
EM: Round [401] log likelihood: -3667698.563853
EM: Round [402] log likelihood: -3667698.563644
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EM: Round [404] log likelihood: -3667698.563230
EM: Round [405] log likelihood: -3667698.563025
EM: Round [406] log likelihood: -3667698.562822
EM: Round [407] log likelihood: -3667698.562621
EM: Round [408] log likelihood: -3667698.562421
EM: Round [409] log likelihood: -3667698.562222
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EM: Round [411] log likelihood: -3667698.561830
EM: Round [412] log likelihood: -3667698.561636
EM: Round [413] log likelihood: -3667698.561443
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EM: Round [415] log likelihood: -3667698.561062
EM: Round [416] log likelihood: -3667698.560874
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EM: Round [418] log likelihood: -3667698.560501
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EM: Round [420] log likelihood: -3667698.560134
EM: Round [421] log likelihood: -3667698.559953
EM: Round [422] log likelihood: -3667698.559772
EM: Round [423] log likelihood: -3667698.559594
EM: Round [424] log likelihood: -3667698.559416
EM: Round [425] log likelihood: -3667698.559240
EM: Round [426] log likelihood: -3667698.559065
EM: Round [427] log likelihood: -3667698.558891
EM: Round [428] log likelihood: -3667698.558719
EM: Round [429] log likelihood: -3667698.558548
EM: Round [430] log likelihood: -3667698.558378
EM: Round [431] log likelihood: -3667698.558210
EM: Round [432] log likelihood: -3667698.558043
EM: Round [433] log likelihood: -3667698.557877
EM: Round [434] log likelihood: -3667698.557712
EM: Round [435] log likelihood: -3667698.557548
EM: Round [436] log likelihood: -3667698.557386
EM: Round [437] log likelihood: -3667698.557225
EM: Round [438] log likelihood: -3667698.557065
EM: Round [439] log likelihood: -3667698.556906
EM: Round [440] log likelihood: -3667698.556748
EM: Round [441] log likelihood: -3667698.556592
EM: Round [442] log likelihood: -3667698.556437
EM: Round [443] log likelihood: -3667698.556282
EM: Round [444] log likelihood: -3667698.556129
EM: Round [445] log likelihood: -3667698.555978
EM: Round [446] log likelihood: -3667698.555827
EM: Round [447] log likelihood: -3667698.555677
EM: Round [448] log likelihood: -3667698.555529
EM: Round [449] log likelihood: -3667698.555381
EM: Round [450] log likelihood: -3667698.555235
EM: Round [451] log likelihood: -3667698.555089
EM: Round [452] log likelihood: -3667698.554945
EM: Round [453] log likelihood: -3667698.554802
EM: Round [454] log likelihood: -3667698.554660
EM: Round [455] log likelihood: -3667698.554519
EM: Round [456] log likelihood: -3667698.554379
EM: Round [457] log likelihood: -3667698.554240
EM: Round [458] log likelihood: -3667698.554102
EM: Round [459] log likelihood: -3667698.553965
EM: Round [460] log likelihood: -3667698.553829
EM: Round [461] log likelihood: -3667698.553694
EM: Round [462] log likelihood: -3667698.553560
EM: Round [463] log likelihood: -3667698.553427
EM: Round [464] log likelihood: -3667698.553295
EM: Round [465] log likelihood: -3667698.553164
EM: Round [466] log likelihood: -3667698.553034
EM: Round [467] log likelihood: -3667698.552905
EM: Round [468] log likelihood: -3667698.552777
EM: Round [469] log likelihood: -3667698.552650
EM: Round [470] log likelihood: -3667698.552524
EM: Round [471] log likelihood: -3667698.552398
EM: Round [472] log likelihood: -3667698.552274
EM: Round [473] log likelihood: -3667698.552150
EM: Round [474] log likelihood: -3667698.552028
EM: Round [475] log likelihood: -3667698.551906
EM: Round [476] log likelihood: -3667698.551785
EM: Round [477] log likelihood: -3667698.551665
EM: Round [478] log likelihood: -3667698.551546
EM: Round [479] log likelihood: -3667698.551428
EM: Round [480] log likelihood: -3667698.551311
EM: Round [481] log likelihood: -3667698.551195
EM: Round [482] log likelihood: -3667698.551079
EM: Round [483] log likelihood: -3667698.550964
EM: Round [484] log likelihood: -3667698.550850
EM: Round [485] log likelihood: -3667698.550737
EM: Round [486] log likelihood: -3667698.550625
EM: Round [487] log likelihood: -3667698.550514
EM: Round [488] log likelihood: -3667698.550403
EM: Round [489] log likelihood: -3667698.550293
EM: Round [490] log likelihood: -3667698.550184
EM: Round [491] log likelihood: -3667698.550076
EM: Round [492] log likelihood: -3667698.549969
EM: Round [493] log likelihood: -3667698.549862
EM: Round [494] log likelihood: -3667698.549756
EM: Round [495] log likelihood: -3667698.549651
EM: Round [496] log likelihood: -3667698.549547
EM: Round [497] log likelihood: -3667698.549443
EM: Round [498] log likelihood: -3667698.549341
EM: Round [499] log likelihood: -3667698.549239
EM: Round [500] log likelihood: -3667698.549137
EM: Round [501] log likelihood: -3667698.549037
EM: Round [502] log likelihood: -3667698.548937
EM: Stopping iterations at round 502 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.65tJsMVxNA/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.65tJsMVxNA/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.65tJsMVxNA/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 294805125 > /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.65tJsMVxNA/ctat_genome_lib_build_dir > /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.65tJsMVxNA/ctat_genome_lib_build_dir --annotate /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.65tJsMVxNA/ctat_genome_lib_build_dir
-done, see /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.65tJsMVxNA/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 628, filtered: 3571)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.65tJsMVxNA/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.65tJsMVxNA/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000210082.2]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000281103.2]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000255949.1]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000204622.11]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000214273.4]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000225594.1]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000180747.15]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000232894.1]
WARNING, no entry stored in dbm for [ENSG00000181126.13]
WARNING, no entry stored in dbm for [ENSG00000204622.11]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000260727.2]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000267196.1]
WARNING, no entry stored in dbm for [ENSG00000226240.2]
WARNING, no entry stored in dbm for [ENSG00000123201.14]
WARNING, no entry stored in dbm for [ENSG00000271162.1]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000131484.4]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000248618.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000284977.2]
WARNING, no entry stored in dbm for [ENSG00000106133.18]
WARNING, no entry stored in dbm for [ENSG00000216863.10]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000255291.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000286436.1]
WARNING, no entry stored in dbm for [ENSG00000233013.10]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000240549.2]
WARNING, no entry stored in dbm for [ENSG00000214820.3]
WARNING, no entry stored in dbm for [ENSG00000276868.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000278834.1]
WARNING, no entry stored in dbm for [ENSG00000228546.2]
WARNING, no entry stored in dbm for [ENSG00000250778.1]
WARNING, no entry stored in dbm for [ENSG00000215546.2]
WARNING, no entry stored in dbm for [ENSG00000186715.11]
WARNING, no entry stored in dbm for [ENSG00000267278.6]
WARNING, no entry stored in dbm for [ENSG00000248973.3]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000254455.1]
WARNING, no entry stored in dbm for [ENSG00000285413.1]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000226043.2]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000284783.1]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000214820.3]
WARNING, no entry stored in dbm for [ENSG00000272384.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000273314.1]
WARNING, no entry stored in dbm for [ENSG00000283662.1]
WARNING, no entry stored in dbm for [ENSG00000268266.1]
WARNING, no entry stored in dbm for [ENSG00000269373.1]
WARNING, no entry stored in dbm for [ENSG00000230565.1]
WARNING, no entry stored in dbm for [ENSG00000219665.8]
WARNING, no entry stored in dbm for [ENSG00000267254.7]
WARNING, no entry stored in dbm for [ENSG00000264269.1]
WARNING, no entry stored in dbm for [ENSG00000250365.7]
WARNING, no entry stored in dbm for [ENSG00000282772.1]
WARNING, no entry stored in dbm for [ENSG00000187653.11]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000239470.3]
WARNING, no entry stored in dbm for [ENSG00000229154.2]
WARNING, no entry stored in dbm for [ENSG00000232139.6]
WARNING, no entry stored in dbm for [ENSG00000203987.3]
WARNING, no entry stored in dbm for [ENSG00000259905.7]
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WARNING, no entry stored in dbm for [ENSG00000234504.2]
WARNING, no entry stored in dbm for [ENSG00000233484.2]
WARNING, no entry stored in dbm for [ENSG00000197308.9]
WARNING, no entry stored in dbm for [ENSG00000182165.18]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000258778.2]
WARNING, no entry stored in dbm for [ENSG00000259343.7]
WARNING, no entry stored in dbm for [ENSG00000284740.1]
WARNING, no entry stored in dbm for [ENSG00000239445.6]
WARNING, no entry stored in dbm for [ENSG00000233296.2]
WARNING, no entry stored in dbm for [ENSG00000235512.1]
WARNING, no entry stored in dbm for [ENSG00000246859.3]
WARNING, no entry stored in dbm for [ENSG00000223984.1]
WARNING, no entry stored in dbm for [ENSG00000207304.1]
WARNING, no entry stored in dbm for [ENSG00000207304.1]
WARNING, no entry stored in dbm for [ENSG00000207523.1]
WARNING, no entry stored in dbm for [ENSG00000204387.14]
WARNING, no entry stored in dbm for [ENSG00000248121.8]
WARNING, no entry stored in dbm for [ENSG00000273609.1]
WARNING, no entry stored in dbm for [ENSG00000287920.1]
WARNING, no entry stored in dbm for [ENSG00000268364.2]
WARNING, no entry stored in dbm for [ENSG00000233369.7]
WARNING, no entry stored in dbm for [ENSG00000267352.1]
WARNING, no entry stored in dbm for [ENSG00000245060.8]
WARNING, no entry stored in dbm for [ENSG00000282989.1]
WARNING, no entry stored in dbm for [ENSG00000250813.1]
WARNING, no entry stored in dbm for [ENSG00000250813.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000239213.6]
WARNING, no entry stored in dbm for [ENSG00000255949.1]
WARNING, no entry stored in dbm for [ENSG00000228417.1]
WARNING, no entry stored in dbm for [ENSG00000216636.1]
WARNING, no entry stored in dbm for [ENSG00000225093.1]
WARNING, no entry stored in dbm for [ENSG00000241582.1]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000241228.1]
WARNING, no entry stored in dbm for [ENSG00000243007.1]
WARNING, no entry stored in dbm for [ENSG00000269609.6]
WARNING, no entry stored in dbm for [ENSG00000223727.6]
WARNING, no entry stored in dbm for [ENSG00000268119.6]
WARNING, no entry stored in dbm for [ENSG00000229153.5]
WARNING, no entry stored in dbm for [ENSG00000248927.1]
WARNING, no entry stored in dbm for [ENSG00000230461.9]
WARNING, no entry stored in dbm for [ENSG00000267308.3]
WARNING, no entry stored in dbm for [ENSG00000224897.8]
WARNING, no entry stored in dbm for [ENSG00000213560.4]
WARNING, no entry stored in dbm for [ENSG00000233987.2]
WARNING, no entry stored in dbm for [ENSG00000225695.1]
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WARNING, no entry stored in dbm for [ENSG00000251636.1]
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WARNING, no entry stored in dbm for [ENSG00000249328.3]
WARNING, no entry stored in dbm for [ENSG00000260024.1]
WARNING, no entry stored in dbm for [ENSG00000178722.13]
WARNING, no entry stored in dbm for [ENSG00000249898.8]
WARNING, no entry stored in dbm for [ENSG00000280402.1]
WARNING, no entry stored in dbm for [ENSG00000232680.2]
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WARNING, no entry stored in dbm for [ENSG00000269038.1]
WARNING, no entry stored in dbm for [ENSG00000214401.4]
WARNING, no entry stored in dbm for [ENSG00000226818.1]
WARNING, no entry stored in dbm for [ENSG00000255191.1]
WARNING, no entry stored in dbm for [ENSG00000284428.1]
WARNING, no entry stored in dbm for [ENSG00000280414.1]
WARNING, no entry stored in dbm for [ENSG00000287148.1]
WARNING, no entry stored in dbm for [ENSG00000262188.2]
WARNING, no entry stored in dbm for [ENSG00000251675.1]
WARNING, no entry stored in dbm for [ENSG00000234663.7]
WARNING, no entry stored in dbm for [ENSG00000237877.7]
WARNING, no entry stored in dbm for [ENSG00000215866.8]
WARNING, no entry stored in dbm for [ENSG00000233806.7]
WARNING, no entry stored in dbm for [ENSG00000285278.1]
WARNING, no entry stored in dbm for [ENSG00000254418.1]
WARNING, no entry stored in dbm for [ENSG00000235124.1]
WARNING, no entry stored in dbm for [ENSG00000259317.1]
WARNING, no entry stored in dbm for [ENSG00000169075.7]
WARNING, no entry stored in dbm for [ENSG00000229656.7]
WARNING, no entry stored in dbm for [ENSG00000259673.6]
WARNING, no entry stored in dbm for [ENSG00000286349.1]
WARNING, no entry stored in dbm for [ENSG00000254946.2]
WARNING, no entry stored in dbm for [ENSG00000205940.8]
WARNING, no entry stored in dbm for [ENSG00000231434.1]
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WARNING, no entry stored in dbm for [ENSG00000236124.1]
WARNING, no entry stored in dbm for [ENSG00000261714.2]
WARNING, no entry stored in dbm for [ENSG00000236124.1]
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WARNING, no entry stored in dbm for [ENSG00000213070.3]
WARNING, no entry stored in dbm for [ENSG00000264729.1]
WARNING, no entry stored in dbm for [ENSG00000260828.1]
WARNING, no entry stored in dbm for [ENSG00000233154.6]
WARNING, no entry stored in dbm for [ENSG00000259845.1]
WARNING, no entry stored in dbm for [ENSG00000103832.10]
WARNING, no entry stored in dbm for [ENSG00000250494.1]
WARNING, no entry stored in dbm for [ENSG00000226002.1]
WARNING, no entry stored in dbm for [ENSG00000275833.1]
WARNING, no entry stored in dbm for [ENSG00000270449.1]
WARNING, no entry stored in dbm for [ENSG00000277561.5]
WARNING, no entry stored in dbm for [ENSG00000260693.1]
WARNING, no entry stored in dbm for [ENSG00000266379.6]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000282826.2]
WARNING, no entry stored in dbm for [ENSG00000232546.1]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000230185.5]
WARNING, no entry stored in dbm for [ENSG00000281195.1]
WARNING, no entry stored in dbm for [ENSG00000265888.2]
WARNING, no entry stored in dbm for [ENSG00000266828.2]
WARNING, no entry stored in dbm for [ENSG00000241884.2]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000288044.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000214826.5]
WARNING, no entry stored in dbm for [ENSG00000250332.1]
WARNING, no entry stored in dbm for [ENSG00000276077.4]
WARNING, no entry stored in dbm for [ENSG00000178803.12]
WARNING, no entry stored in dbm for [ENSG00000233025.1]
WARNING, no entry stored in dbm for [ENSG00000246985.8]
WARNING, no entry stored in dbm for [ENSG00000230630.5]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000242641.6]
WARNING, no entry stored in dbm for [ENSG00000231728.5]
WARNING, no entry stored in dbm for [ENSG00000232098.3]
WARNING, no entry stored in dbm for [ENSG00000203799.13]
WARNING, no entry stored in dbm for [ENSG00000188511.12]
WARNING, no entry stored in dbm for [ENSG00000215146.5]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000205549.10]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000242267.6]
WARNING, no entry stored in dbm for [ENSG00000262117.5]
WARNING, no entry stored in dbm for [ENSG00000204802.3]
WARNING, no entry stored in dbm for [ENSG00000229498.1]
WARNING, no entry stored in dbm for [ENSG00000223602.2]
WARNING, no entry stored in dbm for [ENSG00000214293.9]
WARNING, no entry stored in dbm for [ENSG00000254590.1]
WARNING, no entry stored in dbm for [ENSG00000279392.1]
WARNING, no entry stored in dbm for [ENSG00000285640.1]
WARNING, no entry stored in dbm for [ENSG00000267108.1]
WARNING, no entry stored in dbm for [ENSG00000250769.2]
WARNING, no entry stored in dbm for [ENSG00000215067.10]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000231964.1]
WARNING, no entry stored in dbm for [ENSG00000223774.5]
WARNING, no entry stored in dbm for [ENSG00000170161.7]
WARNING, no entry stored in dbm for [ENSG00000231212.1]
WARNING, no entry stored in dbm for [ENSG00000232059.3]
WARNING, no entry stored in dbm for [ENSG00000240399.1]
WARNING, no entry stored in dbm for [ENSG00000230537.2]
WARNING, no entry stored in dbm for [ENSG00000197670.6]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000233379.2]
WARNING, no entry stored in dbm for [ENSG00000287708.1]
WARNING, no entry stored in dbm for [ENSG00000258028.3]
WARNING, no entry stored in dbm for [ENSG00000237927.1]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000240143.1]
WARNING, no entry stored in dbm for [ENSG00000262528.2]
WARNING, no entry stored in dbm for [ENSG00000287768.1]
WARNING, no entry stored in dbm for [ENSG00000285062.1]
WARNING, no entry stored in dbm for [ENSG00000283453.2]
WARNING, no entry stored in dbm for [ENSG00000285599.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000265798.6]
WARNING, no entry stored in dbm for [ENSG00000266504.1]
WARNING, no entry stored in dbm for [ENSG00000230483.1]
WARNING, no entry stored in dbm for [ENSG00000287090.1]
WARNING, no entry stored in dbm for [ENSG00000236120.7]
WARNING, no entry stored in dbm for [ENSG00000261444.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000225416.1]
WARNING, no entry stored in dbm for [ENSG00000287332.1]
WARNING, no entry stored in dbm for [ENSG00000236480.1]
WARNING, no entry stored in dbm for [ENSG00000282375.1]
WARNING, no entry stored in dbm for [ENSG00000287431.1]
WARNING, no entry stored in dbm for [ENSG00000275516.1]
WARNING, no entry stored in dbm for [ENSG00000234009.1]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [ENSG00000277728.1]
WARNING, no entry stored in dbm for [ENSG00000215068.8]
WARNING, no entry stored in dbm for [ENSG00000251460.1]
WARNING, no entry stored in dbm for [ENSG00000229132.2]
WARNING, no entry stored in dbm for [ENSG00000251378.1]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000276538.1]
WARNING, no entry stored in dbm for [ENSG00000235685.2]
WARNING, no entry stored in dbm for [ENSG00000244245.1]
WARNING, no entry stored in dbm for [ENSG00000287787.1]
WARNING, no entry stored in dbm for [ENSG00000259418.1]
WARNING, no entry stored in dbm for [ENSG00000287826.1]
WARNING, no entry stored in dbm for [ENSG00000265750.1]
WARNING, no entry stored in dbm for [ENSG00000225611.1]
WARNING, no entry stored in dbm for [ENSG00000278867.1]
WARNING, no entry stored in dbm for [ENSG00000242493.3]
WARNING, no entry stored in dbm for [ENSG00000242536.2]
WARNING, no entry stored in dbm for [ENSG00000282299.1]
WARNING, no entry stored in dbm for [ENSG00000213169.3]
WARNING, no entry stored in dbm for [ENSG00000284613.1]
WARNING, no entry stored in dbm for [ENSG00000213174.3]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000271330.1]
WARNING, no entry stored in dbm for [ENSG00000260693.1]
WARNING, no entry stored in dbm for [ENSG00000277741.4]
WARNING, no entry stored in dbm for [ENSG00000238166.2]
WARNING, no entry stored in dbm for [ENSG00000241105.1]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000242338.6]
WARNING, no entry stored in dbm for [ENSG00000285577.1]
WARNING, no entry stored in dbm for [ENSG00000236478.2]
WARNING, no entry stored in dbm for [ENSG00000287085.1]
WARNING, no entry stored in dbm for [ENSG00000267105.1]
WARNING, no entry stored in dbm for [ENSG00000267383.7]
WARNING, no entry stored in dbm for [ENSG00000186594.14]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000273015.2]
WARNING, no entry stored in dbm for [ENSG00000257261.6]
WARNING, no entry stored in dbm for [ENSG00000214190.2]
WARNING, no entry stored in dbm for [ENSG00000261751.1]
WARNING, no entry stored in dbm for [ENSG00000261790.2]
WARNING, no entry stored in dbm for [ENSG00000286045.1]
WARNING, no entry stored in dbm for [ENSG00000260510.1]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000244251.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.65tJsMVxNA/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)