[W::hts_idx_load3] The index file is older than the data file: 1173_C31_T1_RNA_SLD_01_A23T55JLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	90700849
Known Splicing Events:	89799781
Partial Novel Splicing Events:	409123
Novel Splicing Events:	463225
Filtered Splicing Events:	28720

Total splicing  Junctions:	344767
Known Splicing Junctions:	231713
Partial Novel Splicing Junctions:	72665
Novel Splicing Junctions:	40389

===================================================================
Create BED file ...
Create Interact file ...