Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/aef1a0d0ac430871fc1583d7d00437/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a6/8a7d33286577814638e7e5cd03b512/FFPE_V4_0002_RNA_0001_A23T55JLT4_1.Chimeric.out.junction
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1a/aef1a0d0ac430871fc1583d7d00437/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/bec15df205dfb790d7b6b5c07ed11c/FFPE_V4_0002_RNA_0001_A23T55JLT4_1_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/bec15df205dfb790d7b6b5c07ed11c/FFPE_V4_0002_RNA_0001_A23T55JLT4_1_1.fastp.fastq.gz
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.NQGaNYxyuu/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.NQGaNYxyuu/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary
-sample contains 293991150 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.NQGaNYxyuu/ctat_genome_lib_build_dir  -J /tmp/nxf.NQGaNYxyuu/FFPE_V4_0002_RNA_0001_A23T55JLT4_1.Chimeric.out.junction  -O /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.NQGaNYxyuu/FFPE_V4_0002_RNA_0001_A23T55JLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.NQGaNYxyuu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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-building interval tree based on /tmp/nxf.NQGaNYxyuu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[2680000], rate=43719.41/min 
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[2700000], rate=43866.77/min 
[2710000], rate=43886.64/min 
-building interval tree based on /tmp/nxf.NQGaNYxyuu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=75000.00/min 
[20000], rate=80000.00/min 
[30000], rate=72000.00/min 
[40000], rate=70588.24/min 
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[3000000], rate=42694.50/min 
[3010000], rate=42695.04/min 
[3020000], rate=42705.63/min 
[3030000], rate=42726.20/min -building interval tree based on /tmp/nxf.NQGaNYxyuu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=66666.67/min 
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[1840000], rate=28113.06/min 
[1850000], rate=28151.15/min 
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[1870000], rate=28247.73/min 
[1880000], rate=28291.95/min 
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[1910000], rate=28436.72/min 
[1920000], rate=28486.65/min 
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[2000000], rate=28971.51/min 
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[3030000], rate=35253.05/min 
[3040000], rate=35328.30/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.NQGaNYxyuu/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
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 4909090.91 reads per min processed...  
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 5000000.00 reads per min processed...  
 4846153.85 reads per min processed...  
 4888888.89 reads per min processed...  
 4758620.69 reads per min processed...  
 4645161.29 reads per min processed...  
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 4457142.86 reads per min processed...  
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 4533333.33 reads per min processed...  
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 4607142.86 reads per min processed...  
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 4655172.41 reads per min processed...  
 4600000.00 reads per min processed...  
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 4645161.29 reads per min processed...  
 4666666.67 reads per min processed...  
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 4781250.00 reads per min processed...  
 4875000.00 reads per min processed...  
 4818181.82 reads per min processed...  
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 4852941.18 reads per min processed...  
 4869565.22 reads per min processed...  
 4816901.41 reads per min processed...  
 4833333.33 reads per min processed...  
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 4880000.00 reads per min processed...  
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 4846153.85 reads per min processed...  
 4860759.49 reads per min processed...  
 4875000.00 reads per min processed...  
 4829268.29 reads per min processed...  
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 4879120.88 reads per min processed...  
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 4875000.00 reads per min processed...  
 4886597.94 reads per min processed...  
 4897959.18 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.NQGaNYxyuu/FFPE_V4_0002_RNA_0001_A23T55JLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.NQGaNYxyuu/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -773166.486766
EM: Round [1] log likelihood: -772720.468375
EM: Round [2] log likelihood: -772573.787904
EM: Round [3] log likelihood: -772506.250354
EM: Round [4] log likelihood: -772470.160838
EM: Round [5] log likelihood: -772449.152939
EM: Round [6] log likelihood: -772436.161191
EM: Round [7] log likelihood: -772427.728771
EM: Round [8] log likelihood: -772422.028862
EM: Round [9] log likelihood: -772418.039898
EM: Round [10] log likelihood: -772415.163339
EM: Round [11] log likelihood: -772413.034077
EM: Round [12] log likelihood: -772411.421396
EM: Round [13] log likelihood: -772410.174896
EM: Round [14] log likelihood: -772409.193792
EM: Round [15] log likelihood: -772408.408872
EM: Round [16] log likelihood: -772407.771550
EM: Round [17] log likelihood: -772407.247048
EM: Round [18] log likelihood: -772406.810031
EM: Round [19] log likelihood: -772406.441749
EM: Round [20] log likelihood: -772406.128132
EM: Round [21] log likelihood: -772405.858481
EM: Round [22] log likelihood: -772405.624566
EM: Round [23] log likelihood: -772405.419989
EM: Round [24] log likelihood: -772405.239725
EM: Round [25] log likelihood: -772405.079790
EM: Round [26] log likelihood: -772404.936995
EM: Round [27] log likelihood: -772404.808769
EM: Round [28] log likelihood: -772404.693019
EM: Round [29] log likelihood: -772404.588028
EM: Round [30] log likelihood: -772404.492377
EM: Round [31] log likelihood: -772404.404884
EM: Round [32] log likelihood: -772404.324556
EM: Round [33] log likelihood: -772404.250557
EM: Round [34] log likelihood: -772404.182175
EM: Round [35] log likelihood: -772404.118798
EM: Round [36] log likelihood: -772404.059904
EM: Round [37] log likelihood: -772404.005037
EM: Round [38] log likelihood: -772403.953802
EM: Round [39] log likelihood: -772403.905854
EM: Round [40] log likelihood: -772403.860889
EM: Round [41] log likelihood: -772403.818639
EM: Round [42] log likelihood: -772403.778867
EM: Round [43] log likelihood: -772403.741362
EM: Round [44] log likelihood: -772403.705935
EM: Round [45] log likelihood: -772403.672420
EM: Round [46] log likelihood: -772403.640663
EM: Round [47] log likelihood: -772403.610530
EM: Round [48] log likelihood: -772403.581898
EM: Round [49] log likelihood: -772403.554655
EM: Round [50] log likelihood: -772403.528701
EM: Round [51] log likelihood: -772403.503944
EM: Round [52] log likelihood: -772403.480301
EM: Round [53] log likelihood: -772403.457696
EM: Round [54] log likelihood: -772403.436060
EM: Round [55] log likelihood: -772403.415329
EM: Round [56] log likelihood: -772403.395444
EM: Round [57] log likelihood: -772403.376353
EM: Round [58] log likelihood: -772403.358005
EM: Round [59] log likelihood: -772403.340355
EM: Round [60] log likelihood: -772403.323362
EM: Round [61] log likelihood: -772403.306987
EM: Round [62] log likelihood: -772403.291194
EM: Round [63] log likelihood: -772403.275950
EM: Round [64] log likelihood: -772403.261224
EM: Round [65] log likelihood: -772403.246988
EM: Round [66] log likelihood: -772403.233215
EM: Round [67] log likelihood: -772403.219880
EM: Round [68] log likelihood: -772403.206961
EM: Round [69] log likelihood: -772403.194436
EM: Round [70] log likelihood: -772403.182286
EM: Round [71] log likelihood: -772403.170490
EM: Round [72] log likelihood: -772403.159033
EM: Round [73] log likelihood: -772403.147898
EM: Round [74] log likelihood: -772403.137069
EM: Round [75] log likelihood: -772403.126532
EM: Round [76] log likelihood: -772403.116274
EM: Round [77] log likelihood: -772403.106282
EM: Round [78] log likelihood: -772403.096544
EM: Round [79] log likelihood: -772403.087049
EM: Round [80] log likelihood: -772403.077786
EM: Round [81] log likelihood: -772403.068747
EM: Round [82] log likelihood: -772403.059920
EM: Round [83] log likelihood: -772403.051298
EM: Round [84] log likelihood: -772403.042872
EM: Round [85] log likelihood: -772403.034635
EM: Round [86] log likelihood: -772403.026578
EM: Round [87] log likelihood: -772403.018695
EM: Round [88] log likelihood: -772403.010980
EM: Round [89] log likelihood: -772403.003425
EM: Round [90] log likelihood: -772402.996026
EM: Round [91] log likelihood: -772402.988776
EM: Round [92] log likelihood: -772402.981669
EM: Round [93] log likelihood: -772402.974702
EM: Round [94] log likelihood: -772402.967868
EM: Round [95] log likelihood: -772402.961164
EM: Round [96] log likelihood: -772402.954585
EM: Round [97] log likelihood: -772402.948127
EM: Round [98] log likelihood: -772402.941785
EM: Round [99] log likelihood: -772402.935557
EM: Round [100] log likelihood: -772402.929438
EM: Round [101] log likelihood: -772402.923425
EM: Round [102] log likelihood: -772402.917515
EM: Round [103] log likelihood: -772402.911704
EM: Round [104] log likelihood: -772402.905990
EM: Round [105] log likelihood: -772402.900369
EM: Round [106] log likelihood: -772402.894840
EM: Round [107] log likelihood: -772402.889399
EM: Round [108] log likelihood: -772402.884044
EM: Round [109] log likelihood: -772402.878772
EM: Round [110] log likelihood: -772402.873581
EM: Round [111] log likelihood: -772402.868469
EM: Round [112] log likelihood: -772402.863434
EM: Round [113] log likelihood: -772402.858473
EM: Round [114] log likelihood: -772402.853586
EM: Round [115] log likelihood: -772402.848769
EM: Round [116] log likelihood: -772402.844021
EM: Round [117] log likelihood: -772402.839341
EM: Round [118] log likelihood: -772402.834726
EM: Round [119] log likelihood: -772402.830176
EM: Round [120] log likelihood: -772402.825688
EM: Round [121] log likelihood: -772402.821261
EM: Round [122] log likelihood: -772402.816893
EM: Round [123] log likelihood: -772402.812584
EM: Round [124] log likelihood: -772402.808332
EM: Round [125] log likelihood: -772402.804135
EM: Round [126] log likelihood: -772402.799993
EM: Round [127] log likelihood: -772402.795904
EM: Round [128] log likelihood: -772402.791867
EM: Round [129] log likelihood: -772402.787881
EM: Round [130] log likelihood: -772402.783945
EM: Round [131] log likelihood: -772402.780057
EM: Round [132] log likelihood: -772402.776218
EM: Round [133] log likelihood: -772402.772425
EM: Round [134] log likelihood: -772402.768678
EM: Round [135] log likelihood: -772402.764976
EM: Round [136] log likelihood: -772402.761318
EM: Round [137] log likelihood: -772402.757704
EM: Round [138] log likelihood: -772402.754131
EM: Round [139] log likelihood: -772402.750601
EM: Round [140] log likelihood: -772402.747111
EM: Round [141] log likelihood: -772402.743661
EM: Round [142] log likelihood: -772402.740251
EM: Round [143] log likelihood: -772402.736879
EM: Round [144] log likelihood: -772402.733545
EM: Round [145] log likelihood: -772402.730248
EM: Round [146] log likelihood: -772402.726988
EM: Round [147] log likelihood: -772402.723764
EM: Round [148] log likelihood: -772402.720575
EM: Round [149] log likelihood: -772402.717421
EM: Round [150] log likelihood: -772402.714301
EM: Round [151] log likelihood: -772402.711215
EM: Round [152] log likelihood: -772402.708161
EM: Round [153] log likelihood: -772402.705141
EM: Round [154] log likelihood: -772402.702152
EM: Round [155] log likelihood: -772402.699194
EM: Round [156] log likelihood: -772402.696268
EM: Round [157] log likelihood: -772402.693372
EM: Round [158] log likelihood: -772402.690507
EM: Round [159] log likelihood: -772402.687670
EM: Round [160] log likelihood: -772402.684863
EM: Round [161] log likelihood: -772402.682085
EM: Round [162] log likelihood: -772402.679335
EM: Round [163] log likelihood: -772402.676612
EM: Round [164] log likelihood: -772402.673917
EM: Round [165] log likelihood: -772402.671249
EM: Round [166] log likelihood: -772402.668608
EM: Round [167] log likelihood: -772402.665993
EM: Round [168] log likelihood: -772402.663404
EM: Round [169] log likelihood: -772402.660840
EM: Round [170] log likelihood: -772402.658302
EM: Round [171] log likelihood: -772402.655788
EM: Round [172] log likelihood: -772402.653299
EM: Round [173] log likelihood: -772402.650834
EM: Round [174] log likelihood: -772402.648393
EM: Round [175] log likelihood: -772402.645975
EM: Round [176] log likelihood: -772402.643581
EM: Round [177] log likelihood: -772402.641209
EM: Round [178] log likelihood: -772402.638860
EM: Round [179] log likelihood: -772402.636534
EM: Round [180] log likelihood: -772402.634229
EM: Round [181] log likelihood: -772402.631946
EM: Round [182] log likelihood: -772402.629685
EM: Round [183] log likelihood: -772402.627445
EM: Round [184] log likelihood: -772402.625225
EM: Round [185] log likelihood: -772402.623027
EM: Round [186] log likelihood: -772402.620849
EM: Round [187] log likelihood: -772402.618691
EM: Round [188] log likelihood: -772402.616552
EM: Round [189] log likelihood: -772402.614434
EM: Round [190] log likelihood: -772402.612335
EM: Round [191] log likelihood: -772402.610255
EM: Round [192] log likelihood: -772402.608194
EM: Round [193] log likelihood: -772402.606152
EM: Round [194] log likelihood: -772402.604129
EM: Round [195] log likelihood: -772402.602124
EM: Round [196] log likelihood: -772402.600137
EM: Round [197] log likelihood: -772402.598168
EM: Round [198] log likelihood: -772402.596216
EM: Round [199] log likelihood: -772402.594282
EM: Round [200] log likelihood: -772402.592366
EM: Round [201] log likelihood: -772402.590466
EM: Round [202] log likelihood: -772402.588583
EM: Round [203] log likelihood: -772402.586717
EM: Round [204] log likelihood: -772402.584868
EM: Round [205] log likelihood: -772402.583035
EM: Round [206] log likelihood: -772402.581218
EM: Round [207] log likelihood: -772402.579417
EM: Round [208] log likelihood: -772402.577632
EM: Round [209] log likelihood: -772402.575863
EM: Round [210] log likelihood: -772402.574109
EM: Round [211] log likelihood: -772402.572370
EM: Round [212] log likelihood: -772402.570647
EM: Round [213] log likelihood: -772402.568939
EM: Round [214] log likelihood: -772402.567245
EM: Round [215] log likelihood: -772402.565566
EM: Round [216] log likelihood: -772402.563902
EM: Round [217] log likelihood: -772402.562252
EM: Round [218] log likelihood: -772402.560616
EM: Round [219] log likelihood: -772402.558994
EM: Round [220] log likelihood: -772402.557387
EM: Round [221] log likelihood: -772402.555793
EM: Round [222] log likelihood: -772402.554212
EM: Round [223] log likelihood: -772402.552646
EM: Round [224] log likelihood: -772402.551092
EM: Round [225] log likelihood: -772402.549552
EM: Round [226] log likelihood: -772402.548025
EM: Round [227] log likelihood: -772402.546511
EM: Round [228] log likelihood: -772402.545010
EM: Round [229] log likelihood: -772402.543521
EM: Round [230] log likelihood: -772402.542045
EM: Round [231] log likelihood: -772402.540582
EM: Round [232] log likelihood: -772402.539130
EM: Round [233] log likelihood: -772402.537691
EM: Round [234] log likelihood: -772402.536265
EM: Round [235] log likelihood: -772402.534850
EM: Round [236] log likelihood: -772402.533447
EM: Round [237] log likelihood: -772402.532056
EM: Round [238] log likelihood: -772402.530676
EM: Round [239] log likelihood: -772402.529308
EM: Round [240] log likelihood: -772402.527951
EM: Round [241] log likelihood: -772402.526606
EM: Round [242] log likelihood: -772402.525272
EM: Round [243] log likelihood: -772402.523949
EM: Round [244] log likelihood: -772402.522636
EM: Round [245] log likelihood: -772402.521335
EM: Round [246] log likelihood: -772402.520045
EM: Round [247] log likelihood: -772402.518765
EM: Round [248] log likelihood: -772402.517496
EM: Round [249] log likelihood: -772402.516237
EM: Round [250] log likelihood: -772402.514989
EM: Round [251] log likelihood: -772402.513750
EM: Round [252] log likelihood: -772402.512522
EM: Round [253] log likelihood: -772402.511305
EM: Round [254] log likelihood: -772402.510097
EM: Round [255] log likelihood: -772402.508899
EM: Round [256] log likelihood: -772402.507711
EM: Round [257] log likelihood: -772402.506532
EM: Round [258] log likelihood: -772402.505364
EM: Round [259] log likelihood: -772402.504204
EM: Round [260] log likelihood: -772402.503054
EM: Round [261] log likelihood: -772402.501914
EM: Round [262] log likelihood: -772402.500783
EM: Round [263] log likelihood: -772402.499661
EM: Round [264] log likelihood: -772402.498548
EM: Round [265] log likelihood: -772402.497444
EM: Round [266] log likelihood: -772402.496349
EM: Round [267] log likelihood: -772402.495263
EM: Round [268] log likelihood: -772402.494186
EM: Round [269] log likelihood: -772402.493118
EM: Round [270] log likelihood: -772402.492058
EM: Round [271] log likelihood: -772402.491007
EM: Round [272] log likelihood: -772402.489964
EM: Round [273] log likelihood: -772402.488929
EM: Round [274] log likelihood: -772402.487903
EM: Round [275] log likelihood: -772402.486885
EM: Round [276] log likelihood: -772402.485876
EM: Round [277] log likelihood: -772402.484874
EM: Round [278] log likelihood: -772402.483881
EM: Round [279] log likelihood: -772402.482895
EM: Round [280] log likelihood: -772402.481917
EM: Round [281] log likelihood: -772402.480948
EM: Round [282] log likelihood: -772402.479986
EM: Round [283] log likelihood: -772402.479031
EM: Round [284] log likelihood: -772402.478084
EM: Round [285] log likelihood: -772402.477145
EM: Round [286] log likelihood: -772402.476213
EM: Round [287] log likelihood: -772402.475289
EM: Round [288] log likelihood: -772402.474372
EM: Round [289] log likelihood: -772402.473463
EM: Round [290] log likelihood: -772402.472560
EM: Round [291] log likelihood: -772402.471665
EM: Round [292] log likelihood: -772402.470777
EM: Round [293] log likelihood: -772402.469896
EM: Round [294] log likelihood: -772402.469022
EM: Round [295] log likelihood: -772402.468154
EM: Round [296] log likelihood: -772402.467294
EM: Round [297] log likelihood: -772402.466441
EM: Round [298] log likelihood: -772402.465594
EM: Round [299] log likelihood: -772402.464754
EM: Round [300] log likelihood: -772402.463920
EM: Round [301] log likelihood: -772402.463094
EM: Round [302] log likelihood: -772402.462273
EM: Round [303] log likelihood: -772402.461459
EM: Round [304] log likelihood: -772402.460652
EM: Round [305] log likelihood: -772402.459851
EM: Round [306] log likelihood: -772402.459056
EM: Round [307] log likelihood: -772402.458268
EM: Round [308] log likelihood: -772402.457485
EM: Round [309] log likelihood: -772402.456709
EM: Round [310] log likelihood: -772402.455939
EM: Round [311] log likelihood: -772402.455175
EM: Round [312] log likelihood: -772402.454417
EM: Round [313] log likelihood: -772402.453665
EM: Round [314] log likelihood: -772402.452918
EM: Round [315] log likelihood: -772402.452178
EM: Round [316] log likelihood: -772402.451443
EM: Round [317] log likelihood: -772402.450714
EM: Round [318] log likelihood: -772402.449991
EM: Round [319] log likelihood: -772402.449274
EM: Round [320] log likelihood: -772402.448562
EM: Round [321] log likelihood: -772402.447855
EM: Round [322] log likelihood: -772402.447154
EM: Round [323] log likelihood: -772402.446459
EM: Round [324] log likelihood: -772402.445769
EM: Round [325] log likelihood: -772402.445084
EM: Round [326] log likelihood: -772402.444405
EM: Round [327] log likelihood: -772402.443731
EM: Round [328] log likelihood: -772402.443062
EM: Round [329] log likelihood: -772402.442399
EM: Round [330] log likelihood: -772402.441740
EM: Round [331] log likelihood: -772402.441087
EM: Round [332] log likelihood: -772402.440439
EM: Round [333] log likelihood: -772402.439795
EM: Round [334] log likelihood: -772402.439157
EM: Round [335] log likelihood: -772402.438524
EM: Round [336] log likelihood: -772402.437895
EM: Round [337] log likelihood: -772402.437272
EM: Round [338] log likelihood: -772402.436653
EM: Round [339] log likelihood: -772402.436039
EM: Round [340] log likelihood: -772402.435430
EM: Round [341] log likelihood: -772402.434826
EM: Round [342] log likelihood: -772402.434226
EM: Round [343] log likelihood: -772402.433631
EM: Round [344] log likelihood: -772402.433040
EM: Round [345] log likelihood: -772402.432454
EM: Round [346] log likelihood: -772402.431872
EM: Round [347] log likelihood: -772402.431295
EM: Round [348] log likelihood: -772402.430723
EM: Round [349] log likelihood: -772402.430154
EM: Round [350] log likelihood: -772402.429591
EM: Round [351] log likelihood: -772402.429031
EM: Round [352] log likelihood: -772402.428476
EM: Round [353] log likelihood: -772402.427925
EM: Round [354] log likelihood: -772402.427378
EM: Round [355] log likelihood: -772402.426836
EM: Round [356] log likelihood: -772402.426297
EM: Round [357] log likelihood: -772402.425763
EM: Round [358] log likelihood: -772402.425233
EM: Round [359] log likelihood: -772402.424707
EM: Round [360] log likelihood: -772402.424185
EM: Round [361] log likelihood: -772402.423667
EM: Round [362] log likelihood: -772402.423153
EM: Round [363] log likelihood: -772402.422643
EM: Round [364] log likelihood: -772402.422137
EM: Round [365] log likelihood: -772402.421634
EM: Round [366] log likelihood: -772402.421136
EM: Round [367] log likelihood: -772402.420641
EM: Round [368] log likelihood: -772402.420150
EM: Round [369] log likelihood: -772402.419663
EM: Round [370] log likelihood: -772402.419180
EM: Round [371] log likelihood: -772402.418700
EM: Round [372] log likelihood: -772402.418224
EM: Round [373] log likelihood: -772402.417751
EM: Round [374] log likelihood: -772402.417282
EM: Round [375] log likelihood: -772402.416817
EM: Round [376] log likelihood: -772402.416355
EM: Round [377] log likelihood: -772402.415897
EM: Round [378] log likelihood: -772402.415442
EM: Round [379] log likelihood: -772402.414991
EM: Round [380] log likelihood: -772402.414543
EM: Round [381] log likelihood: -772402.414099
EM: Round [382] log likelihood: -772402.413658
EM: Round [383] log likelihood: -772402.413220
EM: Round [384] log likelihood: -772402.412785
EM: Round [385] log likelihood: -772402.412354
EM: Round [386] log likelihood: -772402.411927
EM: Round [387] log likelihood: -772402.411502
EM: Round [388] log likelihood: -772402.411081
EM: Round [389] log likelihood: -772402.410662
EM: Round [390] log likelihood: -772402.410247
EM: Round [391] log likelihood: -772402.409836
EM: Round [392] log likelihood: -772402.409427
EM: Round [393] log likelihood: -772402.409021
EM: Round [394] log likelihood: -772402.408619
EM: Round [395] log likelihood: -772402.408219
EM: Round [396] log likelihood: -772402.407823
EM: Round [397] log likelihood: -772402.407429
EM: Round [398] log likelihood: -772402.407039
EM: Round [399] log likelihood: -772402.406651
EM: Round [400] log likelihood: -772402.406266
EM: Round [401] log likelihood: -772402.405885
EM: Round [402] log likelihood: -772402.405506
EM: Round [403] log likelihood: -772402.405130
EM: Round [404] log likelihood: -772402.404757
EM: Round [405] log likelihood: -772402.404386
EM: Round [406] log likelihood: -772402.404019
EM: Round [407] log likelihood: -772402.403654
EM: Round [408] log likelihood: -772402.403292
EM: Round [409] log likelihood: -772402.402933
EM: Round [410] log likelihood: -772402.402576
EM: Round [411] log likelihood: -772402.402222
EM: Round [412] log likelihood: -772402.401871
EM: Round [413] log likelihood: -772402.401522
EM: Round [414] log likelihood: -772402.401176
EM: Round [415] log likelihood: -772402.400833
EM: Round [416] log likelihood: -772402.400492
EM: Round [417] log likelihood: -772402.400154
EM: Round [418] log likelihood: -772402.399818
EM: Round [419] log likelihood: -772402.399485
EM: Round [420] log likelihood: -772402.399154
EM: Round [421] log likelihood: -772402.398826
EM: Round [422] log likelihood: -772402.398501
EM: Round [423] log likelihood: -772402.398177
EM: Round [424] log likelihood: -772402.397857
EM: Round [425] log likelihood: -772402.397538
EM: Round [426] log likelihood: -772402.397222
EM: Round [427] log likelihood: -772402.396908
EM: Round [428] log likelihood: -772402.396597
EM: Round [429] log likelihood: -772402.396288
EM: Round [430] log likelihood: -772402.395981
EM: Round [431] log likelihood: -772402.395677
EM: Round [432] log likelihood: -772402.395375
EM: Round [433] log likelihood: -772402.395075
EM: Round [434] log likelihood: -772402.394778
EM: Round [435] log likelihood: -772402.394482
EM: Round [436] log likelihood: -772402.394189
EM: Round [437] log likelihood: -772402.393898
EM: Round [438] log likelihood: -772402.393609
EM: Round [439] log likelihood: -772402.393323
EM: Round [440] log likelihood: -772402.393038
EM: Round [441] log likelihood: -772402.392756
EM: Round [442] log likelihood: -772402.392476
EM: Round [443] log likelihood: -772402.392198
EM: Round [444] log likelihood: -772402.391922
EM: Round [445] log likelihood: -772402.391648
EM: Round [446] log likelihood: -772402.391376
EM: Round [447] log likelihood: -772402.391106
EM: Round [448] log likelihood: -772402.390838
EM: Round [449] log likelihood: -772402.390572
EM: Round [450] log likelihood: -772402.390308
EM: Round [451] log likelihood: -772402.390046
EM: Round [452] log likelihood: -772402.389786
EM: Round [453] log likelihood: -772402.389528
EM: Round [454] log likelihood: -772402.389272
EM: Round [455] log likelihood: -772402.389018
EM: Round [456] log likelihood: -772402.388765
EM: Round [457] log likelihood: -772402.388515
EM: Round [458] log likelihood: -772402.388266
EM: Round [459] log likelihood: -772402.388019
EM: Round [460] log likelihood: -772402.387775
EM: Round [461] log likelihood: -772402.387531
EM: Round [462] log likelihood: -772402.387290
EM: Round [463] log likelihood: -772402.387051
EM: Round [464] log likelihood: -772402.386813
EM: Round [465] log likelihood: -772402.386577
EM: Round [466] log likelihood: -772402.386343
EM: Round [467] log likelihood: -772402.386110
EM: Round [468] log likelihood: -772402.385880
EM: Round [469] log likelihood: -772402.385651
EM: Round [470] log likelihood: -772402.385423
EM: Round [471] log likelihood: -772402.385198
EM: Round [472] log likelihood: -772402.384974
EM: Round [473] log likelihood: -772402.384752
EM: Round [474] log likelihood: -772402.384531
EM: Round [475] log likelihood: -772402.384312
EM: Round [476] log likelihood: -772402.384095
EM: Round [477] log likelihood: -772402.383879
EM: Round [478] log likelihood: -772402.383665
EM: Round [479] log likelihood: -772402.383452
EM: Round [480] log likelihood: -772402.383241
EM: Round [481] log likelihood: -772402.383032
EM: Round [482] log likelihood: -772402.382824
EM: Round [483] log likelihood: -772402.382618
EM: Round [484] log likelihood: -772402.382413
EM: Round [485] log likelihood: -772402.382210
EM: Round [486] log likelihood: -772402.382008
EM: Round [487] log likelihood: -772402.381807
EM: Round [488] log likelihood: -772402.381609
EM: Round [489] log likelihood: -772402.381411
EM: Round [490] log likelihood: -772402.381215
EM: Round [491] log likelihood: -772402.381021
EM: Round [492] log likelihood: -772402.380828
EM: Round [493] log likelihood: -772402.380636
EM: Round [494] log likelihood: -772402.380446
EM: Round [495] log likelihood: -772402.380258
EM: Round [496] log likelihood: -772402.380070
EM: Round [497] log likelihood: -772402.379884
EM: Round [498] log likelihood: -772402.379700
EM: Round [499] log likelihood: -772402.379516
EM: Round [500] log likelihood: -772402.379335
EM: Round [501] log likelihood: -772402.379154
EM: Round [502] log likelihood: -772402.378975
EM: Round [503] log likelihood: -772402.378797
EM: Round [504] log likelihood: -772402.378620
EM: Round [505] log likelihood: -772402.378445
EM: Round [506] log likelihood: -772402.378271
EM: Round [507] log likelihood: -772402.378099
EM: Round [508] log likelihood: -772402.377927
EM: Round [509] log likelihood: -772402.377757
EM: Round [510] log likelihood: -772402.377588
EM: Round [511] log likelihood: -772402.377420
EM: Round [512] log likelihood: -772402.377254
EM: Round [513] log likelihood: -772402.377089
EM: Round [514] log likelihood: -772402.376925
EM: Round [515] log likelihood: -772402.376762
EM: Round [516] log likelihood: -772402.376601
EM: Round [517] log likelihood: -772402.376440
EM: Round [518] log likelihood: -772402.376281
EM: Round [519] log likelihood: -772402.376123
EM: Round [520] log likelihood: -772402.375966
EM: Round [521] log likelihood: -772402.375810
EM: Round [522] log likelihood: -772402.375656
EM: Round [523] log likelihood: -772402.375502
EM: Round [524] log likelihood: -772402.375350
EM: Round [525] log likelihood: -772402.375199
EM: Round [526] log likelihood: -772402.375049
EM: Round [527] log likelihood: -772402.374900
EM: Round [528] log likelihood: -772402.374752
EM: Round [529] log likelihood: -772402.374605
EM: Round [530] log likelihood: -772402.374460
EM: Round [531] log likelihood: -772402.374315
EM: Round [532] log likelihood: -772402.374171
EM: Round [533] log likelihood: -772402.374029
EM: Round [534] log likelihood: -772402.373887
EM: Round [535] log likelihood: -772402.373747
EM: Round [536] log likelihood: -772402.373608
EM: Round [537] log likelihood: -772402.373469
EM: Round [538] log likelihood: -772402.373332
EM: Round [539] log likelihood: -772402.373196
EM: Round [540] log likelihood: -772402.373060
EM: Round [541] log likelihood: -772402.372926
EM: Round [542] log likelihood: -772402.372792
EM: Round [543] log likelihood: -772402.372660
EM: Round [544] log likelihood: -772402.372529
EM: Round [545] log likelihood: -772402.372398
EM: Round [546] log likelihood: -772402.372269
EM: Round [547] log likelihood: -772402.372140
EM: Round [548] log likelihood: -772402.372012
EM: Round [549] log likelihood: -772402.371886
EM: Round [550] log likelihood: -772402.371760
EM: Round [551] log likelihood: -772402.371635
EM: Round [552] log likelihood: -772402.371511
EM: Round [553] log likelihood: -772402.371388
EM: Round [554] log likelihood: -772402.371266
EM: Round [555] log likelihood: -772402.371145
EM: Round [556] log likelihood: -772402.371025
EM: Round [557] log likelihood: -772402.370905
EM: Round [558] log likelihood: -772402.370787
EM: Round [559] log likelihood: -772402.370669
EM: Round [560] log likelihood: -772402.370552
EM: Round [561] log likelihood: -772402.370436
EM: Round [562] log likelihood: -772402.370321
EM: Round [563] log likelihood: -772402.370207
EM: Round [564] log likelihood: -772402.370093
EM: Round [565] log likelihood: -772402.369981
EM: Round [566] log likelihood: -772402.369869
EM: Round [567] log likelihood: -772402.369758
EM: Round [568] log likelihood: -772402.369648
EM: Round [569] log likelihood: -772402.369538
EM: Round [570] log likelihood: -772402.369430
EM: Round [571] log likelihood: -772402.369322
EM: Round [572] log likelihood: -772402.369215
EM: Round [573] log likelihood: -772402.369109
EM: Round [574] log likelihood: -772402.369003
EM: Round [575] log likelihood: -772402.368898
EM: Round [576] log likelihood: -772402.368795
EM: Round [577] log likelihood: -772402.368691
EM: Round [578] log likelihood: -772402.368589
EM: Round [579] log likelihood: -772402.368487
EM: Round [580] log likelihood: -772402.368386
EM: Round [581] log likelihood: -772402.368286
EM: Round [582] log likelihood: -772402.368187
EM: Stopping iterations at round 582 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -771952.806969
EM: Round [1] log likelihood: -771614.065947
EM: Round [2] log likelihood: -771507.288172
EM: Round [3] log likelihood: -771460.538485
EM: Round [4] log likelihood: -771436.570198
EM: Round [5] log likelihood: -771423.049067
EM: Round [6] log likelihood: -771414.874814
EM: Round [7] log likelihood: -771409.647214
EM: Round [8] log likelihood: -771406.141454
EM: Round [9] log likelihood: -771403.694354
EM: Round [10] log likelihood: -771401.928242
EM: Round [11] log likelihood: -771400.617892
EM: Round [12] log likelihood: -771399.623149
EM: Round [13] log likelihood: -771398.853348
EM: Round [14] log likelihood: -771398.247780
EM: Round [15] log likelihood: -771397.764550
EM: Round [16] log likelihood: -771397.373987
EM: Round [17] log likelihood: -771397.054618
EM: Round [18] log likelihood: -771396.790613
EM: Round [19] log likelihood: -771396.570121
EM: Round [20] log likelihood: -771396.384159
EM: Round [21] log likelihood: -771396.225840
EM: Round [22] log likelihood: -771396.089835
EM: Round [23] log likelihood: -771395.971987
EM: Round [24] log likelihood: -771395.869028
EM: Round [25] log likelihood: -771395.778373
EM: Round [26] log likelihood: -771395.697962
EM: Round [27] log likelihood: -771395.626141
EM: Round [28] log likelihood: -771395.561578
EM: Round [29] log likelihood: -771395.503191
EM: Round [30] log likelihood: -771395.450094
EM: Round [31] log likelihood: -771395.401559
EM: Round [32] log likelihood: -771395.356985
EM: Round [33] log likelihood: -771395.315869
EM: Round [34] log likelihood: -771395.277790
EM: Round [35] log likelihood: -771395.242394
EM: Round [36] log likelihood: -771395.209377
EM: Round [37] log likelihood: -771395.178484
EM: Round [38] log likelihood: -771395.149493
EM: Round [39] log likelihood: -771395.122213
EM: Round [40] log likelihood: -771395.096478
EM: Round [41] log likelihood: -771395.072144
EM: Round [42] log likelihood: -771395.049084
EM: Round [43] log likelihood: -771395.027186
EM: Round [44] log likelihood: -771395.006352
EM: Round [45] log likelihood: -771394.986494
EM: Round [46] log likelihood: -771394.967533
EM: Round [47] log likelihood: -771394.949401
EM: Round [48] log likelihood: -771394.932034
EM: Round [49] log likelihood: -771394.915376
EM: Round [50] log likelihood: -771394.899376
EM: Round [51] log likelihood: -771394.883988
EM: Round [52] log likelihood: -771394.869171
EM: Round [53] log likelihood: -771394.854886
EM: Round [54] log likelihood: -771394.841099
EM: Round [55] log likelihood: -771394.827778
EM: Round [56] log likelihood: -771394.814895
EM: Round [57] log likelihood: -771394.802422
EM: Round [58] log likelihood: -771394.790335
EM: Round [59] log likelihood: -771394.778613
EM: Round [60] log likelihood: -771394.767233
EM: Round [61] log likelihood: -771394.756178
EM: Round [62] log likelihood: -771394.745430
EM: Round [63] log likelihood: -771394.734971
EM: Round [64] log likelihood: -771394.724788
EM: Round [65] log likelihood: -771394.714865
EM: Round [66] log likelihood: -771394.705191
EM: Round [67] log likelihood: -771394.695752
EM: Round [68] log likelihood: -771394.686538
EM: Round [69] log likelihood: -771394.677538
EM: Round [70] log likelihood: -771394.668741
EM: Round [71] log likelihood: -771394.660140
EM: Round [72] log likelihood: -771394.651724
EM: Round [73] log likelihood: -771394.643487
EM: Round [74] log likelihood: -771394.635421
EM: Round [75] log likelihood: -771394.627518
EM: Round [76] log likelihood: -771394.619772
EM: Round [77] log likelihood: -771394.612176
EM: Round [78] log likelihood: -771394.604725
EM: Round [79] log likelihood: -771394.597413
EM: Round [80] log likelihood: -771394.590235
EM: Round [81] log likelihood: -771394.583187
EM: Round [82] log likelihood: -771394.576262
EM: Round [83] log likelihood: -771394.569458
EM: Round [84] log likelihood: -771394.562769
EM: Round [85] log likelihood: -771394.556193
EM: Round [86] log likelihood: -771394.549724
EM: Round [87] log likelihood: -771394.543360
EM: Round [88] log likelihood: -771394.537098
EM: Round [89] log likelihood: -771394.530934
EM: Round [90] log likelihood: -771394.524865
EM: Round [91] log likelihood: -771394.518888
EM: Round [92] log likelihood: -771394.513001
EM: Round [93] log likelihood: -771394.507201
EM: Round [94] log likelihood: -771394.501486
EM: Round [95] log likelihood: -771394.495852
EM: Round [96] log likelihood: -771394.490299
EM: Round [97] log likelihood: -771394.484824
EM: Round [98] log likelihood: -771394.479424
EM: Round [99] log likelihood: -771394.474099
EM: Round [100] log likelihood: -771394.468845
EM: Round [101] log likelihood: -771394.463662
EM: Round [102] log likelihood: -771394.458547
EM: Round [103] log likelihood: -771394.453500
EM: Round [104] log likelihood: -771394.448517
EM: Round [105] log likelihood: -771394.443598
EM: Round [106] log likelihood: -771394.438742
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EM: Round [542] log likelihood: -771393.933658
EM: Round [543] log likelihood: -771393.933526
EM: Round [544] log likelihood: -771393.933394
EM: Round [545] log likelihood: -771393.933264
EM: Round [546] log likelihood: -771393.933134
EM: Round [547] log likelihood: -771393.933006
EM: Round [548] log likelihood: -771393.932878
EM: Round [549] log likelihood: -771393.932752
EM: Round [550] log likelihood: -771393.932626
EM: Round [551] log likelihood: -771393.932501
EM: Round [552] log likelihood: -771393.932377
EM: Round [553] log likelihood: -771393.932254
EM: Round [554] log likelihood: -771393.932132
EM: Round [555] log likelihood: -771393.932011
EM: Round [556] log likelihood: -771393.931891
EM: Round [557] log likelihood: -771393.931771
EM: Round [558] log likelihood: -771393.931653
EM: Round [559] log likelihood: -771393.931535
EM: Round [560] log likelihood: -771393.931418
EM: Round [561] log likelihood: -771393.931303
EM: Round [562] log likelihood: -771393.931187
EM: Round [563] log likelihood: -771393.931073
EM: Round [564] log likelihood: -771393.930960
EM: Round [565] log likelihood: -771393.930847
EM: Round [566] log likelihood: -771393.930735
EM: Round [567] log likelihood: -771393.930624
EM: Round [568] log likelihood: -771393.930514
EM: Round [569] log likelihood: -771393.930405
EM: Round [570] log likelihood: -771393.930296
EM: Round [571] log likelihood: -771393.930189
EM: Round [572] log likelihood: -771393.930082
EM: Round [573] log likelihood: -771393.929976
EM: Round [574] log likelihood: -771393.929870
EM: Round [575] log likelihood: -771393.929766
EM: Round [576] log likelihood: -771393.929662
EM: Round [577] log likelihood: -771393.929559
EM: Round [578] log likelihood: -771393.929456
EM: Round [579] log likelihood: -771393.929355
EM: Round [580] log likelihood: -771393.929254
EM: Round [581] log likelihood: -771393.929154
EM: Round [582] log likelihood: -771393.929054
EM: Stopping iterations at round 582 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.NQGaNYxyuu/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.NQGaNYxyuu/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.NQGaNYxyuu/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 293991150 > /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.NQGaNYxyuu/ctat_genome_lib_build_dir > /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.NQGaNYxyuu/ctat_genome_lib_build_dir --annotate /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.NQGaNYxyuu/ctat_genome_lib_build_dir
-done, see /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.NQGaNYxyuu/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 2574, filtered: 10257)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.NQGaNYxyuu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.NQGaNYxyuu/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000243538.1]
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WARNING, no entry stored in dbm for [ENSG00000242993.1]
WARNING, no entry stored in dbm for [ENSG00000242945.2]
WARNING, no entry stored in dbm for [ENSG00000241081.1]
WARNING, no entry stored in dbm for [ENSG00000241081.1]
WARNING, no entry stored in dbm for [ENSG00000242423.2]
WARNING, no entry stored in dbm for [ENSG00000274210.1]
WARNING, no entry stored in dbm for [ENSG00000207205.1]
WARNING, no entry stored in dbm for [ENSG00000207205.1]
WARNING, no entry stored in dbm for [ENSG00000221676.1]
WARNING, no entry stored in dbm for [ENSG00000253832.1]
WARNING, no entry stored in dbm for [ENSG00000278887.2]
WARNING, no entry stored in dbm for [ENSG00000228793.2]
WARNING, no entry stored in dbm for [ENSG00000186481.16]
WARNING, no entry stored in dbm for [ENSG00000201041.1]
WARNING, no entry stored in dbm for [ENSG00000240606.3]
WARNING, no entry stored in dbm for [ENSG00000228242.6]
WARNING, no entry stored in dbm for [ENSG00000242559.3]
WARNING, no entry stored in dbm for [ENSG00000228242.6]
WARNING, no entry stored in dbm for [ENSG00000237278.2]
WARNING, no entry stored in dbm for [ENSG00000236719.5]
WARNING, no entry stored in dbm for [ENSG00000239202.3]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000278834.1]
WARNING, no entry stored in dbm for [ENSG00000281566.3]
WARNING, no entry stored in dbm for [ENSG00000224631.4]
WARNING, no entry stored in dbm for [ENSG00000286424.1]
WARNING, no entry stored in dbm for [ENSG00000271119.1]
WARNING, no entry stored in dbm for [ENSG00000217783.2]
WARNING, no entry stored in dbm for [ENSG00000280425.2]
WARNING, no entry stored in dbm for [ENSG00000287921.1]
WARNING, no entry stored in dbm for [ENSG00000258033.1]
WARNING, no entry stored in dbm for [ENSG00000285967.1]
WARNING, no entry stored in dbm for [ENSG00000246067.8]
WARNING, no entry stored in dbm for [ENSG00000218175.2]
WARNING, no entry stored in dbm for [ENSG00000283453.2]
WARNING, no entry stored in dbm for [ENSG00000213985.4]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000285756.2]
WARNING, no entry stored in dbm for [ENSG00000257350.1]
WARNING, no entry stored in dbm for [ENSG00000286372.1]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000257621.8]
WARNING, no entry stored in dbm for [ENSG00000257621.8]
WARNING, no entry stored in dbm for [ENSG00000257621.8]
WARNING, no entry stored in dbm for [ENSG00000099725.14]
WARNING, no entry stored in dbm for [ENSG00000268869.6]
WARNING, no entry stored in dbm for [ENSG00000260316.2]
WARNING, no entry stored in dbm for [ENSG00000230510.7]
WARNING, no entry stored in dbm for [ENSG00000223855.2]
WARNING, no entry stored in dbm for [ENSG00000228940.1]
WARNING, no entry stored in dbm for [ENSG00000271131.1]
WARNING, no entry stored in dbm for [ENSG00000239607.3]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000200087.1]
WARNING, no entry stored in dbm for [ENSG00000272655.2]
WARNING, no entry stored in dbm for [ENSG00000241057.2]
WARNING, no entry stored in dbm for [ENSG00000270571.2]
WARNING, no entry stored in dbm for [ENSG00000196796.5]
WARNING, no entry stored in dbm for [ENSG00000229018.5]
WARNING, no entry stored in dbm for [ENSG00000228546.2]
WARNING, no entry stored in dbm for [ENSG00000250778.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000254681.6]
WARNING, no entry stored in dbm for [ENSG00000250251.6]
WARNING, no entry stored in dbm for [ENSG00000214765.8]
WARNING, no entry stored in dbm for [ENSG00000274615.1]
WARNING, no entry stored in dbm for [ENSG00000280407.2]
WARNING, no entry stored in dbm for [ENSG00000214189.9]
WARNING, no entry stored in dbm for [ENSG00000223855.2]
WARNING, no entry stored in dbm for [ENSG00000262343.1]
WARNING, no entry stored in dbm for [ENSG00000213468.7]
WARNING, no entry stored in dbm for [ENSG00000286532.1]
WARNING, no entry stored in dbm for [ENSG00000249263.2]
WARNING, no entry stored in dbm for [ENSG00000237164.1]
WARNING, no entry stored in dbm for [ENSG00000267270.6]
WARNING, no entry stored in dbm for [ENSG00000177410.13]
WARNING, no entry stored in dbm for [ENSG00000234741.8]
WARNING, no entry stored in dbm for [ENSG00000238152.2]
WARNING, no entry stored in dbm for [ENSG00000284707.2]
WARNING, no entry stored in dbm for [ENSG00000272937.2]
WARNING, no entry stored in dbm for [ENSG00000235823.3]
WARNING, no entry stored in dbm for [ENSG00000247556.6]
WARNING, no entry stored in dbm for [ENSG00000223482.8]
WARNING, no entry stored in dbm for [ENSG00000261359.2]
WARNING, no entry stored in dbm for [ENSG00000244720.1]
WARNING, no entry stored in dbm for [ENSG00000106133.18]
WARNING, no entry stored in dbm for [ENSG00000188599.17]
WARNING, no entry stored in dbm for [ENSG00000188599.17]
WARNING, no entry stored in dbm for [ENSG00000264342.3]
WARNING, no entry stored in dbm for [ENSG00000188599.17]
WARNING, no entry stored in dbm for [ENSG00000234177.5]
WARNING, no entry stored in dbm for [ENSG00000264635.1]
WARNING, no entry stored in dbm for [ENSG00000174977.8]
WARNING, no entry stored in dbm for [ENSG00000267610.2]
WARNING, no entry stored in dbm for [ENSG00000254400.1]
WARNING, no entry stored in dbm for [ENSG00000232729.8]
WARNING, no entry stored in dbm for [ENSG00000223489.1]
WARNING, no entry stored in dbm for [ENSG00000270804.1]
WARNING, no entry stored in dbm for [ENSG00000234226.5]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000228409.6]
WARNING, no entry stored in dbm for [ENSG00000286597.1]
WARNING, no entry stored in dbm for [ENSG00000249229.2]
WARNING, no entry stored in dbm for [ENSG00000179978.11]
WARNING, no entry stored in dbm for [ENSG00000283072.3]
WARNING, no entry stored in dbm for [ENSG00000258792.4]
WARNING, no entry stored in dbm for [ENSG00000251034.2]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000287362.1]
WARNING, no entry stored in dbm for [ENSG00000286188.1]
WARNING, no entry stored in dbm for [ENSG00000288577.1]
WARNING, no entry stored in dbm for [ENSG00000232724.1]
WARNING, no entry stored in dbm for [ENSG00000263033.2]
WARNING, no entry stored in dbm for [ENSG00000277159.1]
WARNING, no entry stored in dbm for [ENSG00000239219.2]
WARNING, no entry stored in dbm for [ENSG00000255571.9]
WARNING, no entry stored in dbm for [ENSG00000264037.1]
WARNING, no entry stored in dbm for [ENSG00000224592.5]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000272645.3]
WARNING, no entry stored in dbm for [ENSG00000239906.1]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000254860.6]
WARNING, no entry stored in dbm for [ENSG00000165178.9]
WARNING, no entry stored in dbm for [ENSG00000251136.9]
WARNING, no entry stored in dbm for [ENSG00000178722.13]
WARNING, no entry stored in dbm for [ENSG00000249898.8]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000229619.4]
WARNING, no entry stored in dbm for [ENSG00000267278.6]
WARNING, no entry stored in dbm for [ENSG00000248973.3]
WARNING, no entry stored in dbm for [ENSG00000284842.1]
WARNING, no entry stored in dbm for [ENSG00000172460.17]
WARNING, no entry stored in dbm for [ENSG00000218510.8]
WARNING, no entry stored in dbm for [ENSG00000204790.9]
WARNING, no entry stored in dbm for [ENSG00000254332.1]
WARNING, no entry stored in dbm for [ENSG00000279649.1]
WARNING, no entry stored in dbm for [ENSG00000279935.1]
WARNING, no entry stored in dbm for [ENSG00000286718.1]
WARNING, no entry stored in dbm for [ENSG00000234222.6]
WARNING, no entry stored in dbm for [ENSG00000251323.3]
WARNING, no entry stored in dbm for [ENSG00000271584.2]
WARNING, no entry stored in dbm for [ENSG00000271584.2]
WARNING, no entry stored in dbm for [ENSG00000251129.2]
WARNING, no entry stored in dbm for [ENSG00000258018.2]
WARNING, no entry stored in dbm for [ENSG00000250754.6]
WARNING, no entry stored in dbm for [ENSG00000283554.1]
WARNING, no entry stored in dbm for [ENSG00000230102.8]
WARNING, no entry stored in dbm for [ENSG00000224565.2]
WARNING, no entry stored in dbm for [ENSG00000279579.3]
WARNING, no entry stored in dbm for [ENSG00000258602.1]
WARNING, no entry stored in dbm for [ENSG00000258779.8]
WARNING, no entry stored in dbm for [ENSG00000238113.7]
WARNING, no entry stored in dbm for [ENSG00000228262.10]
WARNING, no entry stored in dbm for [ENSG00000233806.7]
WARNING, no entry stored in dbm for [ENSG00000281404.2]
WARNING, no entry stored in dbm for [ENSG00000235366.2]
WARNING, no entry stored in dbm for [ENSG00000242258.1]
WARNING, no entry stored in dbm for [ENSG00000247982.6]
WARNING, no entry stored in dbm for [ENSG00000247982.6]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000266256.3]
WARNING, no entry stored in dbm for [ENSG00000261824.7]
WARNING, no entry stored in dbm for [ENSG00000226067.7]
WARNING, no entry stored in dbm for [ENSG00000250585.3]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000188185.13]
WARNING, no entry stored in dbm for [ENSG00000179406.8]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000225370.1]
WARNING, no entry stored in dbm for [ENSG00000260765.2]
WARNING, no entry stored in dbm for [ENSG00000227591.5]
WARNING, no entry stored in dbm for [ENSG00000267719.1]
WARNING, no entry stored in dbm for [ENSG00000236360.2]
WARNING, no entry stored in dbm for [ENSG00000226419.8]
WARNING, no entry stored in dbm for [ENSG00000233308.2]
WARNING, no entry stored in dbm for [ENSG00000247363.2]
WARNING, no entry stored in dbm for [ENSG00000257307.1]
WARNING, no entry stored in dbm for [ENSG00000204790.9]
WARNING, no entry stored in dbm for [ENSG00000234741.8]
WARNING, no entry stored in dbm for [ENSG00000225652.2]
WARNING, no entry stored in dbm for [ENSG00000225652.2]
WARNING, no entry stored in dbm for [ENSG00000253477.5]
WARNING, no entry stored in dbm for [ENSG00000229127.2]
WARNING, no entry stored in dbm for [ENSG00000258325.2]
WARNING, no entry stored in dbm for [ENSG00000197536.11]
WARNING, no entry stored in dbm for [ENSG00000259673.6]
WARNING, no entry stored in dbm for [ENSG00000270760.1]
WARNING, no entry stored in dbm for [ENSG00000253877.6]
WARNING, no entry stored in dbm for [ENSG00000269091.6]
WARNING, no entry stored in dbm for [ENSG00000197744.5]
WARNING, no entry stored in dbm for [ENSG00000173209.23]
WARNING, no entry stored in dbm for [ENSG00000255733.6]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000196312.15]
WARNING, no entry stored in dbm for [ENSG00000286176.2]
WARNING, no entry stored in dbm for [ENSG00000230148.8]
WARNING, no entry stored in dbm for [ENSG00000227117.6]
WARNING, no entry stored in dbm for [ENSG00000236565.3]
WARNING, no entry stored in dbm for [ENSG00000241388.5]
WARNING, no entry stored in dbm for [ENSG00000272369.1]
WARNING, no entry stored in dbm for [ENSG00000231471.1]
WARNING, no entry stored in dbm for [ENSG00000261620.1]
WARNING, no entry stored in dbm for [ENSG00000235290.1]
WARNING, no entry stored in dbm for [ENSG00000230795.3]
WARNING, no entry stored in dbm for [ENSG00000274471.2]
WARNING, no entry stored in dbm for [ENSG00000276550.4]
WARNING, no entry stored in dbm for [ENSG00000206344.7]
WARNING, no entry stored in dbm for [ENSG00000228789.8]
WARNING, no entry stored in dbm for [ENSG00000253924.2]
WARNING, no entry stored in dbm for [ENSG00000226222.3]
WARNING, no entry stored in dbm for [ENSG00000258741.4]
WARNING, no entry stored in dbm for [ENSG00000258741.4]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000254838.5]
WARNING, no entry stored in dbm for [ENSG00000198237.8]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000183666.17]
WARNING, no entry stored in dbm for [ENSG00000226002.1]
WARNING, no entry stored in dbm for [ENSG00000254840.1]
WARNING, no entry stored in dbm for [ENSG00000219559.1]
WARNING, no entry stored in dbm for [ENSG00000274265.5]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000257915.1]
WARNING, no entry stored in dbm for [ENSG00000250959.2]
WARNING, no entry stored in dbm for [ENSG00000229116.3]
WARNING, no entry stored in dbm for [ENSG00000249352.4]
WARNING, no entry stored in dbm for [ENSG00000229976.2]
WARNING, no entry stored in dbm for [ENSG00000234108.1]
WARNING, no entry stored in dbm for [ENSG00000268461.2]
WARNING, no entry stored in dbm for [ENSG00000234741.8]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000180211.5]
WARNING, no entry stored in dbm for [ENSG00000236487.2]
WARNING, no entry stored in dbm for [ENSG00000258792.4]
WARNING, no entry stored in dbm for [ENSG00000251034.2]
WARNING, no entry stored in dbm for [ENSG00000213468.7]
WARNING, no entry stored in dbm for [ENSG00000226803.9]
WARNING, no entry stored in dbm for [ENSG00000275340.1]
WARNING, no entry stored in dbm for [ENSG00000230316.7]
WARNING, no entry stored in dbm for [ENSG00000181741.7]
WARNING, no entry stored in dbm for [ENSG00000259469.1]
WARNING, no entry stored in dbm for [ENSG00000231528.3]
WARNING, no entry stored in dbm for [ENSG00000279222.1]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000225377.6]
WARNING, no entry stored in dbm for [ENSG00000185485.14]
WARNING, no entry stored in dbm for [ENSG00000250980.1]
WARNING, no entry stored in dbm for [ENSG00000226688.7]
WARNING, no entry stored in dbm for [ENSG00000249392.1]
WARNING, no entry stored in dbm for [ENSG00000258454.1]
WARNING, no entry stored in dbm for [ENSG00000225889.9]
WARNING, no entry stored in dbm for [ENSG00000231133.8]
WARNING, no entry stored in dbm for [ENSG00000224722.3]
WARNING, no entry stored in dbm for [ENSG00000264044.1]
WARNING, no entry stored in dbm for [ENSG00000224032.7]
WARNING, no entry stored in dbm for [ENSG00000185684.15]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000285417.1]
WARNING, no entry stored in dbm for [ENSG00000236829.9]
WARNING, no entry stored in dbm for [ENSG00000229018.5]
WARNING, no entry stored in dbm for [ENSG00000237505.8]
WARNING, no entry stored in dbm for [ENSG00000257790.1]
WARNING, no entry stored in dbm for [ENSG00000231018.1]
WARNING, no entry stored in dbm for [ENSG00000179523.5]
WARNING, no entry stored in dbm for [ENSG00000206120.11]
WARNING, no entry stored in dbm for [ENSG00000263883.1]
WARNING, no entry stored in dbm for [ENSG00000213130.3]
WARNING, no entry stored in dbm for [ENSG00000177410.13]
WARNING, no entry stored in dbm for [ENSG00000249855.1]
WARNING, no entry stored in dbm for [ENSG00000213235.3]
WARNING, no entry stored in dbm for [ENSG00000254783.1]
WARNING, no entry stored in dbm for [ENSG00000286854.1]
WARNING, no entry stored in dbm for [ENSG00000273151.1]
WARNING, no entry stored in dbm for [ENSG00000286780.1]
WARNING, no entry stored in dbm for [ENSG00000225171.2]
WARNING, no entry stored in dbm for [ENSG00000229829.1]
WARNING, no entry stored in dbm for [ENSG00000245750.10]
WARNING, no entry stored in dbm for [ENSG00000245750.10]
WARNING, no entry stored in dbm for [ENSG00000276710.4]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000279160.1]
WARNING, no entry stored in dbm for [ENSG00000260261.2]
WARNING, no entry stored in dbm for [ENSG00000279373.1]
WARNING, no entry stored in dbm for [ENSG00000225012.5]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000213118.4]
WARNING, no entry stored in dbm for [ENSG00000279588.2]
WARNING, no entry stored in dbm for [ENSG00000200434.1]
WARNING, no entry stored in dbm for [ENSG00000236567.2]
WARNING, no entry stored in dbm for [ENSG00000226609.2]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000250993.1]
WARNING, no entry stored in dbm for [ENSG00000231890.8]
WARNING, no entry stored in dbm for [ENSG00000287249.1]
WARNING, no entry stored in dbm for [ENSG00000276077.4]
WARNING, no entry stored in dbm for [ENSG00000276077.4]
WARNING, no entry stored in dbm for [ENSG00000233025.1]
WARNING, no entry stored in dbm for [ENSG00000225769.1]
WARNING, no entry stored in dbm for [ENSG00000270533.2]
WARNING, no entry stored in dbm for [ENSG00000287778.1]
WARNING, no entry stored in dbm for [ENSG00000255284.2]
WARNING, no entry stored in dbm for [ENSG00000131797.12]
WARNING, no entry stored in dbm for [ENSG00000287688.1]
WARNING, no entry stored in dbm for [ENSG00000256582.1]
WARNING, no entry stored in dbm for [ENSG00000232305.1]
WARNING, no entry stored in dbm for [ENSG00000232645.5]
WARNING, no entry stored in dbm for [ENSG00000239246.3]
WARNING, no entry stored in dbm for [ENSG00000228695.10]
WARNING, no entry stored in dbm for [ENSG00000234936.1]
WARNING, no entry stored in dbm for [ENSG00000154608.14]
WARNING, no entry stored in dbm for [ENSG00000183444.10]
WARNING, no entry stored in dbm for [ENSG00000259767.1]
WARNING, no entry stored in dbm for [ENSG00000230711.2]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000185684.15]
WARNING, no entry stored in dbm for [ENSG00000176984.6]
WARNING, no entry stored in dbm for [ENSG00000227742.2]
WARNING, no entry stored in dbm for [ENSG00000230185.5]
WARNING, no entry stored in dbm for [ENSG00000198590.12]
WARNING, no entry stored in dbm for [ENSG00000283829.1]
WARNING, no entry stored in dbm for [ENSG00000259482.2]
WARNING, no entry stored in dbm for [ENSG00000259953.2]
WARNING, no entry stored in dbm for [ENSG00000260630.7]
WARNING, no entry stored in dbm for [ENSG00000285672.1]
WARNING, no entry stored in dbm for [ENSG00000285417.1]
WARNING, no entry stored in dbm for [ENSG00000285417.1]
WARNING, no entry stored in dbm for [ENSG00000260157.3]
WARNING, no entry stored in dbm for [ENSG00000124549.14]
WARNING, no entry stored in dbm for [ENSG00000232260.2]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000282851.2]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000164385.9]
WARNING, no entry stored in dbm for [ENSG00000224093.5]
WARNING, no entry stored in dbm for [ENSG00000279356.1]
WARNING, no entry stored in dbm for [ENSG00000235335.3]
WARNING, no entry stored in dbm for [ENSG00000235335.3]
WARNING, no entry stored in dbm for [ENSG00000258877.2]
WARNING, no entry stored in dbm for [ENSG00000197595.4]
WARNING, no entry stored in dbm for [ENSG00000227881.1]
WARNING, no entry stored in dbm for [ENSG00000236017.8]
WARNING, no entry stored in dbm for [ENSG00000235919.4]
WARNING, no entry stored in dbm for [ENSG00000267080.6]
WARNING, no entry stored in dbm for [ENSG00000267080.6]
WARNING, no entry stored in dbm for [ENSG00000225733.6]
WARNING, no entry stored in dbm for [ENSG00000288028.1]
WARNING, no entry stored in dbm for [ENSG00000231898.9]
WARNING, no entry stored in dbm for [ENSG00000237181.1]
WARNING, no entry stored in dbm for [ENSG00000260103.2]
WARNING, no entry stored in dbm for [ENSG00000244879.8]
WARNING, no entry stored in dbm for [ENSG00000237940.3]
WARNING, no entry stored in dbm for [ENSG00000254332.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000254590.1]
WARNING, no entry stored in dbm for [ENSG00000196312.15]
WARNING, no entry stored in dbm for [ENSG00000283704.1]
WARNING, no entry stored in dbm for [ENSG00000239920.2]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000255296.1]
WARNING, no entry stored in dbm for [ENSG00000254733.1]
WARNING, no entry stored in dbm for [ENSG00000254990.5]
WARNING, no entry stored in dbm for [ENSG00000270449.1]
WARNING, no entry stored in dbm for [ENSG00000213104.3]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000253666.2]
WARNING, no entry stored in dbm for [ENSG00000218418.2]
WARNING, no entry stored in dbm for [ENSG00000231533.2]
WARNING, no entry stored in dbm for [ENSG00000233673.7]
WARNING, no entry stored in dbm for [ENSG00000228929.1]
WARNING, no entry stored in dbm for [ENSG00000215067.10]
WARNING, no entry stored in dbm for [ENSG00000259984.1]
WARNING, no entry stored in dbm for [ENSG00000286389.1]
WARNING, no entry stored in dbm for [ENSG00000245275.8]
WARNING, no entry stored in dbm for [ENSG00000270094.1]
WARNING, no entry stored in dbm for [ENSG00000170161.7]
WARNING, no entry stored in dbm for [ENSG00000279321.1]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000225096.3]
WARNING, no entry stored in dbm for [ENSG00000287422.1]
WARNING, no entry stored in dbm for [ENSG00000238005.4]
WARNING, no entry stored in dbm for [ENSG00000235020.5]
WARNING, no entry stored in dbm for [ENSG00000232347.1]
WARNING, no entry stored in dbm for [ENSG00000226465.3]
WARNING, no entry stored in dbm for [ENSG00000235582.2]
WARNING, no entry stored in dbm for [ENSG00000215016.2]
WARNING, no entry stored in dbm for [ENSG00000272405.1]
WARNING, no entry stored in dbm for [ENSG00000180015.12]
WARNING, no entry stored in dbm for [ENSG00000237445.2]
WARNING, no entry stored in dbm for [ENSG00000236523.2]
WARNING, no entry stored in dbm for [ENSG00000282772.1]
WARNING, no entry stored in dbm for [ENSG00000245466.1]
WARNING, no entry stored in dbm for [ENSG00000236358.1]
WARNING, no entry stored in dbm for [ENSG00000278390.5]
WARNING, no entry stored in dbm for [ENSG00000276759.2]
WARNING, no entry stored in dbm for [ENSG00000165121.11]
WARNING, no entry stored in dbm for [ENSG00000285424.1]
WARNING, no entry stored in dbm for [ENSG00000286162.2]
WARNING, no entry stored in dbm for [ENSG00000228436.3]
WARNING, no entry stored in dbm for [ENSG00000176320.2]
WARNING, no entry stored in dbm for [ENSG00000283078.1]
WARNING, no entry stored in dbm for [ENSG00000244471.6]
WARNING, no entry stored in dbm for [ENSG00000258757.1]
WARNING, no entry stored in dbm for [ENSG00000240096.1]
WARNING, no entry stored in dbm for [ENSG00000224722.3]
WARNING, no entry stored in dbm for [ENSG00000235122.4]
WARNING, no entry stored in dbm for [ENSG00000286787.1]
WARNING, no entry stored in dbm for [ENSG00000288044.1]
WARNING, no entry stored in dbm for [ENSG00000204253.4]
WARNING, no entry stored in dbm for [ENSG00000286546.1]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000274760.1]
WARNING, no entry stored in dbm for [ENSG00000274760.1]
WARNING, no entry stored in dbm for [ENSG00000272345.1]
WARNING, no entry stored in dbm for [ENSG00000235912.1]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000232087.1]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000244692.3]
WARNING, no entry stored in dbm for [ENSG00000243738.3]
WARNING, no entry stored in dbm for [ENSG00000203876.10]
WARNING, no entry stored in dbm for [ENSG00000259315.1]
WARNING, no entry stored in dbm for [ENSG00000180139.11]
WARNING, no entry stored in dbm for [ENSG00000185607.5]
WARNING, no entry stored in dbm for [ENSG00000264739.1]
WARNING, no entry stored in dbm for [ENSG00000286198.1]
WARNING, no entry stored in dbm for [ENSG00000254319.6]
WARNING, no entry stored in dbm for [ENSG00000285062.1]
WARNING, no entry stored in dbm for [ENSG00000237017.1]
WARNING, no entry stored in dbm for [ENSG00000237017.1]
WARNING, no entry stored in dbm for [ENSG00000276216.1]
WARNING, no entry stored in dbm for [ENSG00000223804.5]
WARNING, no entry stored in dbm for [ENSG00000226780.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000232077.2]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000133624.13]
WARNING, no entry stored in dbm for [ENSG00000275557.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000250909.1]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000282508.2]
WARNING, no entry stored in dbm for [ENSG00000264107.1]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000260335.1]
WARNING, no entry stored in dbm for [ENSG00000260335.1]
WARNING, no entry stored in dbm for [ENSG00000265458.2]
WARNING, no entry stored in dbm for [ENSG00000243655.2]
WARNING, no entry stored in dbm for [ENSG00000240801.1]
WARNING, no entry stored in dbm for [ENSG00000248964.7]
WARNING, no entry stored in dbm for [ENSG00000271002.1]
WARNING, no entry stored in dbm for [ENSG00000271002.1]
WARNING, no entry stored in dbm for [ENSG00000253392.3]
WARNING, no entry stored in dbm for [ENSG00000243199.1]
WARNING, no entry stored in dbm for [ENSG00000216754.2]
WARNING, no entry stored in dbm for [ENSG00000235421.1]
WARNING, no entry stored in dbm for [ENSG00000278791.1]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000285454.1]
WARNING, no entry stored in dbm for [ENSG00000285454.1]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000226439.3]
WARNING, no entry stored in dbm for [ENSG00000261889.1]
WARNING, no entry stored in dbm for [ENSG00000250111.3]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000245025.3]
WARNING, no entry stored in dbm for [ENSG00000257526.2]
WARNING, no entry stored in dbm for [ENSG00000170089.15]
WARNING, no entry stored in dbm for [ENSG00000225416.1]
WARNING, no entry stored in dbm for [ENSG00000260776.6]
WARNING, no entry stored in dbm for [ENSG00000225420.1]
WARNING, no entry stored in dbm for [ENSG00000274353.1]
WARNING, no entry stored in dbm for [ENSG00000128438.10]
WARNING, no entry stored in dbm for [ENSG00000282375.1]
WARNING, no entry stored in dbm for [ENSG00000287431.1]
WARNING, no entry stored in dbm for [ENSG00000273118.1]
WARNING, no entry stored in dbm for [ENSG00000244021.4]
WARNING, no entry stored in dbm for [ENSG00000280402.1]
WARNING, no entry stored in dbm for [ENSG00000260167.1]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000284687.1]
WARNING, no entry stored in dbm for [ENSG00000284605.1]
WARNING, no entry stored in dbm for [ENSG00000248126.1]
WARNING, no entry stored in dbm for [ENSG00000253123.4]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000266379.6]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000213280.2]
WARNING, no entry stored in dbm for [ENSG00000267408.1]
WARNING, no entry stored in dbm for [ENSG00000279259.1]
WARNING, no entry stored in dbm for [ENSG00000261879.7]
WARNING, no entry stored in dbm for [ENSG00000259347.7]
WARNING, no entry stored in dbm for [ENSG00000283415.2]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000233673.7]
WARNING, no entry stored in dbm for [ENSG00000285744.1]
WARNING, no entry stored in dbm for [ENSG00000287022.1]
WARNING, no entry stored in dbm for [ENSG00000287022.1]
WARNING, no entry stored in dbm for [ENSG00000250546.6]
WARNING, no entry stored in dbm for [ENSG00000225205.5]
WARNING, no entry stored in dbm for [ENSG00000286035.1]
WARNING, no entry stored in dbm for [ENSG00000234129.8]
WARNING, no entry stored in dbm for [ENSG00000272693.4]
WARNING, no entry stored in dbm for [ENSG00000231359.3]
WARNING, no entry stored in dbm for [ENSG00000213942.3]
WARNING, no entry stored in dbm for [ENSG00000232431.3]
WARNING, no entry stored in dbm for [ENSG00000248932.6]
WARNING, no entry stored in dbm for [ENSG00000286090.1]
WARNING, no entry stored in dbm for [ENSG00000261386.2]
WARNING, no entry stored in dbm for [ENSG00000250764.1]
WARNING, no entry stored in dbm for [ENSG00000253704.2]
WARNING, no entry stored in dbm for [ENSG00000256894.1]
WARNING, no entry stored in dbm for [ENSG00000260276.2]
WARNING, no entry stored in dbm for [ENSG00000248898.3]
WARNING, no entry stored in dbm for [ENSG00000266988.6]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000267605.7]
WARNING, no entry stored in dbm for [ENSG00000286030.2]
WARNING, no entry stored in dbm for [ENSG00000286893.1]
WARNING, no entry stored in dbm for [ENSG00000244251.1]
WARNING, no entry stored in dbm for [ENSG00000261526.2]
WARNING, no entry stored in dbm for [ENSG00000259349.2]
WARNING, no entry stored in dbm for [ENSG00000283285.1]
WARNING, no entry stored in dbm for [ENSG00000283897.2]
WARNING, no entry stored in dbm for [ENSG00000283897.2]
WARNING, no entry stored in dbm for [ENSG00000241281.1]
WARNING, no entry stored in dbm for [ENSG00000262732.1]
WARNING, no entry stored in dbm for [ENSG00000288585.1]
WARNING, no entry stored in dbm for [ENSG00000111788.10]
WARNING, no entry stored in dbm for [ENSG00000216895.9]
WARNING, no entry stored in dbm for [ENSG00000286797.1]
WARNING, no entry stored in dbm for [ENSG00000286797.1]
WARNING, no entry stored in dbm for [ENSG00000234352.9]
WARNING, no entry stored in dbm for [ENSG00000259952.1]
WARNING, no entry stored in dbm for [ENSG00000259877.2]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000288554.1]
WARNING, no entry stored in dbm for [ENSG00000270049.3]
WARNING, no entry stored in dbm for [ENSG00000267751.5]
WARNING, no entry stored in dbm for [ENSG00000250155.2]
WARNING, no entry stored in dbm for [ENSG00000249236.2]
WARNING, no entry stored in dbm for [ENSG00000254170.1]
WARNING, no entry stored in dbm for [ENSG00000237875.1]
WARNING, no entry stored in dbm for [ENSG00000276548.1]
WARNING, no entry stored in dbm for [ENSG00000276548.1]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000244657.1]
WARNING, no entry stored in dbm for [ENSG00000257221.4]
WARNING, no entry stored in dbm for [ENSG00000238165.1]
WARNING, no entry stored in dbm for [ENSG00000238041.3]
WARNING, no entry stored in dbm for [ENSG00000238165.1]
WARNING, no entry stored in dbm for [ENSG00000225728.2]
WARNING, no entry stored in dbm for [ENSG00000227946.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000267575.7]
WARNING, no entry stored in dbm for [ENSG00000267469.1]
WARNING, no entry stored in dbm for [ENSG00000267044.1]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000226624.1]
WARNING, no entry stored in dbm for [ENSG00000227081.5]
WARNING, no entry stored in dbm for [ENSG00000224273.2]
WARNING, no entry stored in dbm for [ENSG00000243004.6]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000205485.13]
WARNING, no entry stored in dbm for [ENSG00000277283.1]
WARNING, no entry stored in dbm for [ENSG00000214870.9]
WARNING, no entry stored in dbm for [ENSG00000268163.1]
WARNING, no entry stored in dbm for [ENSG00000267328.1]
WARNING, no entry stored in dbm for [ENSG00000255920.3]
WARNING, no entry stored in dbm for [ENSG00000227598.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.NQGaNYxyuu/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)