Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/82/0db9775374bf971ee25d6b5efaf787/1173_C31_T1_RNA_SLD_01_A23T55JLT4_1_1.fastp.fastq.gz
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/11a96087a89708a37fc50e851f5e23/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/82/0db9775374bf971ee25d6b5efaf787/1173_C31_T1_RNA_SLD_01_A23T55JLT4_1_2.fastp.fastq.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7a/55d4990929a49b1df9a5c04c10e423/1173_C31_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/11a96087a89708a37fc50e851f5e23/.command.run
==> STAGING COMPLETE (6 inputs)
-ctat genome lib [/tmp/nxf.zSfy6mrX3H/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.zSfy6mrX3H/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary
-sample contains 102762022 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.zSfy6mrX3H/ctat_genome_lib_build_dir -J /tmp/nxf.zSfy6mrX3H/1173_C31_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction -O /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4
-parsing fusion evidence: /tmp/nxf.zSfy6mrX3H/1173_C31_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.zSfy6mrX3H/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes
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[1120000], rate=55172.41/min -building interval tree based on /tmp/nxf.zSfy6mrX3H/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes
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[1120000], rate=55036.86/min -building interval tree based on /tmp/nxf.zSfy6mrX3H/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
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[1120000], rate=53333.33/min -building interval tree based on /tmp/nxf.zSfy6mrX3H/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes
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[1110000], rate=50917.43/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.zSfy6mrX3H/ctat_genome_lib_build_dir --filt_file /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-parsing /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.
0.00 reads per min processed...
12000000.00 reads per min processed...
6000000.00 reads per min processed...
4000000.00 reads per min processed...
3333333.33 reads per min processed...
2769230.77 reads per min processed...
2625000.00 reads per min processed...
2526315.79 reads per min processed...
2454545.45 reads per min processed...
2400000.00 reads per min processed...
2357142.86 reads per min processed...
2322580.65 reads per min processed...
2294117.65 reads per min processed...
2333333.33 reads per min processed...
2368421.05 reads per min processed...
2400000.00 reads per min processed...
2428571.43 reads per min processed...
2454545.45 reads per min processed...
2533333.33 reads per min processed...
2666666.67 reads per min processed...
2625000.00 reads per min processed...
2640000.00 reads per min processed...
2653846.15 reads per min processed...
2716981.13 reads per min processed...
2678571.43 reads per min processed...
2689655.17 reads per min processed...
2700000.00 reads per min processed...
2709677.42 reads per min processed...
done.
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion
-parsing fusion evidence: /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.zSfy6mrX3H/1173_C31_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.zSfy6mrX3H/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -1435132.563561
EM: Round [1] log likelihood: -1434936.705267
EM: Round [2] log likelihood: -1434873.164165
EM: Round [3] log likelihood: -1434844.638167
EM: Round [4] log likelihood: -1434829.909671
EM: Round [5] log likelihood: -1434821.663514
EM: Round [6] log likelihood: -1434816.736921
EM: Round [7] log likelihood: -1434813.606777
EM: Round [8] log likelihood: -1434811.497810
EM: Round [9] log likelihood: -1434809.999323
EM: Round [10] log likelihood: -1434808.885094
EM: Round [11] log likelihood: -1434808.025178
EM: Round [12] log likelihood: -1434807.341533
EM: Round [13] log likelihood: -1434806.785109
EM: Round [14] log likelihood: -1434806.323694
EM: Round [15] log likelihood: -1434805.935252
EM: Round [16] log likelihood: -1434805.604160
EM: Round [17] log likelihood: -1434805.318990
EM: Round [18] log likelihood: -1434805.071162
EM: Round [19] log likelihood: -1434804.854097
EM: Round [20] log likelihood: -1434804.662654
EM: Round [21] log likelihood: -1434804.492755
EM: Round [22] log likelihood: -1434804.341126
EM: Round [23] log likelihood: -1434804.205104
EM: Round [24] log likelihood: -1434804.082508
EM: Round [25] log likelihood: -1434803.971531
EM: Round [26] log likelihood: -1434803.870667
EM: Round [27] log likelihood: -1434803.778652
EM: Round [28] log likelihood: -1434803.694418
EM: Round [29] log likelihood: -1434803.617057
EM: Round [30] log likelihood: -1434803.545795
EM: Round [31] log likelihood: -1434803.479964
EM: Round [32] log likelihood: -1434803.418991
EM: Round [33] log likelihood: -1434803.362379
EM: Round [34] log likelihood: -1434803.309692
EM: Round [35] log likelihood: -1434803.260554
EM: Round [36] log likelihood: -1434803.214632
EM: Round [37] log likelihood: -1434803.171634
EM: Round [38] log likelihood: -1434803.131302
EM: Round [39] log likelihood: -1434803.093407
EM: Round [40] log likelihood: -1434803.057745
EM: Round [41] log likelihood: -1434803.024134
EM: Round [42] log likelihood: -1434802.992414
EM: Round [43] log likelihood: -1434802.962437
EM: Round [44] log likelihood: -1434802.934072
EM: Round [45] log likelihood: -1434802.907202
EM: Round [46] log likelihood: -1434802.881719
EM: Round [47] log likelihood: -1434802.857527
EM: Round [48] log likelihood: -1434802.834536
EM: Round [49] log likelihood: -1434802.812668
EM: Round [50] log likelihood: -1434802.791847
EM: Round [51] log likelihood: -1434802.772008
EM: Round [52] log likelihood: -1434802.753089
EM: Round [53] log likelihood: -1434802.735033
EM: Round [54] log likelihood: -1434802.717787
EM: Round [55] log likelihood: -1434802.701305
EM: Round [56] log likelihood: -1434802.685542
EM: Round [57] log likelihood: -1434802.670457
EM: Round [58] log likelihood: -1434802.656011
EM: Round [59] log likelihood: -1434802.642170
EM: Round [60] log likelihood: -1434802.628901
EM: Round [61] log likelihood: -1434802.616173
EM: Round [62] log likelihood: -1434802.603958
EM: Round [63] log likelihood: -1434802.592230
EM: Round [64] log likelihood: -1434802.580962
EM: Round [65] log likelihood: -1434802.570134
EM: Round [66] log likelihood: -1434802.559721
EM: Round [67] log likelihood: -1434802.549705
EM: Round [68] log likelihood: -1434802.540067
EM: Round [69] log likelihood: -1434802.530787
EM: Round [70] log likelihood: -1434802.521850
EM: Round [71] log likelihood: -1434802.513239
EM: Round [72] log likelihood: -1434802.504940
EM: Round [73] log likelihood: -1434802.496937
EM: Round [74] log likelihood: -1434802.489219
EM: Round [75] log likelihood: -1434802.481773
EM: Round [76] log likelihood: -1434802.474585
EM: Round [77] log likelihood: -1434802.467646
EM: Round [78] log likelihood: -1434802.460945
EM: Round [79] log likelihood: -1434802.454471
EM: Round [80] log likelihood: -1434802.448215
EM: Round [81] log likelihood: -1434802.442168
EM: Round [82] log likelihood: -1434802.436321
EM: Round [83] log likelihood: -1434802.430666
EM: Round [84] log likelihood: -1434802.425196
EM: Round [85] log likelihood: -1434802.419902
EM: Round [86] log likelihood: -1434802.414778
EM: Round [87] log likelihood: -1434802.409818
EM: Round [88] log likelihood: -1434802.405014
EM: Round [89] log likelihood: -1434802.400361
EM: Round [90] log likelihood: -1434802.395853
EM: Round [91] log likelihood: -1434802.391484
EM: Round [92] log likelihood: -1434802.387250
EM: Round [93] log likelihood: -1434802.383144
EM: Round [94] log likelihood: -1434802.379163
EM: Round [95] log likelihood: -1434802.375302
EM: Round [96] log likelihood: -1434802.371556
EM: Round [97] log likelihood: -1434802.367921
EM: Round [98] log likelihood: -1434802.364394
EM: Round [99] log likelihood: -1434802.360969
EM: Round [100] log likelihood: -1434802.357645
EM: Round [101] log likelihood: -1434802.354416
EM: Round [102] log likelihood: -1434802.351280
EM: Round [103] log likelihood: -1434802.348234
EM: Round [104] log likelihood: -1434802.345274
EM: Round [105] log likelihood: -1434802.342398
EM: Round [106] log likelihood: -1434802.339602
EM: Round [107] log likelihood: -1434802.336884
EM: Round [108] log likelihood: -1434802.334242
EM: Round [109] log likelihood: -1434802.331672
EM: Round [110] log likelihood: -1434802.329173
EM: Round [111] log likelihood: -1434802.326741
EM: Round [112] log likelihood: -1434802.324375
EM: Round [113] log likelihood: -1434802.322073
EM: Round [114] log likelihood: -1434802.319833
EM: Round [115] log likelihood: -1434802.317652
EM: Round [116] log likelihood: -1434802.315529
EM: Round [117] log likelihood: -1434802.313462
EM: Round [118] log likelihood: -1434802.311449
EM: Round [119] log likelihood: -1434802.309488
EM: Round [120] log likelihood: -1434802.307578
EM: Round [121] log likelihood: -1434802.305717
EM: Round [122] log likelihood: -1434802.303904
EM: Round [123] log likelihood: -1434802.302137
EM: Round [124] log likelihood: -1434802.300415
EM: Round [125] log likelihood: -1434802.298736
EM: Round [126] log likelihood: -1434802.297100
EM: Round [127] log likelihood: -1434802.295504
EM: Round [128] log likelihood: -1434802.293948
EM: Round [129] log likelihood: -1434802.292430
EM: Round [130] log likelihood: -1434802.290950
EM: Round [131] log likelihood: -1434802.289506
EM: Round [132] log likelihood: -1434802.288097
EM: Round [133] log likelihood: -1434802.286722
EM: Round [134] log likelihood: -1434802.285381
EM: Round [135] log likelihood: -1434802.284072
EM: Round [136] log likelihood: -1434802.282794
EM: Round [137] log likelihood: -1434802.281546
EM: Round [138] log likelihood: -1434802.280328
EM: Round [139] log likelihood: -1434802.279139
EM: Round [140] log likelihood: -1434802.277978
EM: Round [141] log likelihood: -1434802.276843
EM: Round [142] log likelihood: -1434802.275736
EM: Round [143] log likelihood: -1434802.274654
EM: Round [144] log likelihood: -1434802.273596
EM: Round [145] log likelihood: -1434802.272564
EM: Round [146] log likelihood: -1434802.271554
EM: Round [147] log likelihood: -1434802.270568
EM: Round [148] log likelihood: -1434802.269604
EM: Round [149] log likelihood: -1434802.268662
EM: Round [150] log likelihood: -1434802.267742
EM: Round [151] log likelihood: -1434802.266841
EM: Round [152] log likelihood: -1434802.265961
EM: Round [153] log likelihood: -1434802.265101
EM: Round [154] log likelihood: -1434802.264259
EM: Round [155] log likelihood: -1434802.263437
EM: Round [156] log likelihood: -1434802.262632
EM: Round [157] log likelihood: -1434802.261845
EM: Round [158] log likelihood: -1434802.261075
EM: Round [159] log likelihood: -1434802.260322
EM: Round [160] log likelihood: -1434802.259585
EM: Round [161] log likelihood: -1434802.258864
EM: Round [162] log likelihood: -1434802.258158
EM: Round [163] log likelihood: -1434802.257468
EM: Round [164] log likelihood: -1434802.256792
EM: Round [165] log likelihood: -1434802.256131
EM: Round [166] log likelihood: -1434802.255484
EM: Round [167] log likelihood: -1434802.254851
EM: Round [168] log likelihood: -1434802.254231
EM: Round [169] log likelihood: -1434802.253623
EM: Round [170] log likelihood: -1434802.253029
EM: Round [171] log likelihood: -1434802.252447
EM: Round [172] log likelihood: -1434802.251877
EM: Round [173] log likelihood: -1434802.251319
EM: Round [174] log likelihood: -1434802.250773
EM: Round [175] log likelihood: -1434802.250238
EM: Round [176] log likelihood: -1434802.249714
EM: Round [177] log likelihood: -1434802.249200
EM: Round [178] log likelihood: -1434802.248697
EM: Round [179] log likelihood: -1434802.248204
EM: Round [180] log likelihood: -1434802.247722
EM: Round [181] log likelihood: -1434802.247249
EM: Round [182] log likelihood: -1434802.246786
EM: Round [183] log likelihood: -1434802.246332
EM: Round [184] log likelihood: -1434802.245887
EM: Round [185] log likelihood: -1434802.245451
EM: Round [186] log likelihood: -1434802.245024
EM: Round [187] log likelihood: -1434802.244605
EM: Round [188] log likelihood: -1434802.244195
EM: Round [189] log likelihood: -1434802.243792
EM: Round [190] log likelihood: -1434802.243398
EM: Round [191] log likelihood: -1434802.243012
EM: Round [192] log likelihood: -1434802.242633
EM: Round [193] log likelihood: -1434802.242262
EM: Round [194] log likelihood: -1434802.241897
EM: Round [195] log likelihood: -1434802.241540
EM: Round [196] log likelihood: -1434802.241190
EM: Round [197] log likelihood: -1434802.240847
EM: Round [198] log likelihood: -1434802.240511
EM: Round [199] log likelihood: -1434802.240181
EM: Round [200] log likelihood: -1434802.239857
EM: Round [201] log likelihood: -1434802.239540
EM: Round [202] log likelihood: -1434802.239229
EM: Round [203] log likelihood: -1434802.238923
EM: Round [204] log likelihood: -1434802.238624
EM: Round [205] log likelihood: -1434802.238330
EM: Round [206] log likelihood: -1434802.238042
EM: Round [207] log likelihood: -1434802.237760
EM: Round [208] log likelihood: -1434802.237483
EM: Round [209] log likelihood: -1434802.237211
EM: Round [210] log likelihood: -1434802.236944
EM: Round [211] log likelihood: -1434802.236682
EM: Round [212] log likelihood: -1434802.236426
EM: Round [213] log likelihood: -1434802.236174
EM: Round [214] log likelihood: -1434802.235927
EM: Round [215] log likelihood: -1434802.235684
EM: Round [216] log likelihood: -1434802.235446
EM: Round [217] log likelihood: -1434802.235213
EM: Round [218] log likelihood: -1434802.234984
EM: Round [219] log likelihood: -1434802.234759
EM: Round [220] log likelihood: -1434802.234539
EM: Round [221] log likelihood: -1434802.234322
EM: Round [222] log likelihood: -1434802.234110
EM: Round [223] log likelihood: -1434802.233901
EM: Round [224] log likelihood: -1434802.233697
EM: Round [225] log likelihood: -1434802.233496
EM: Round [226] log likelihood: -1434802.233299
EM: Round [227] log likelihood: -1434802.233105
EM: Round [228] log likelihood: -1434802.232915
EM: Round [229] log likelihood: -1434802.232729
EM: Round [230] log likelihood: -1434802.232546
EM: Round [231] log likelihood: -1434802.232366
EM: Round [232] log likelihood: -1434802.232190
EM: Round [233] log likelihood: -1434802.232017
EM: Round [234] log likelihood: -1434802.231847
EM: Round [235] log likelihood: -1434802.231680
EM: Round [236] log likelihood: -1434802.231516
EM: Round [237] log likelihood: -1434802.231356
EM: Round [238] log likelihood: -1434802.231198
EM: Round [239] log likelihood: -1434802.231043
EM: Round [240] log likelihood: -1434802.230891
EM: Round [241] log likelihood: -1434802.230741
EM: Round [242] log likelihood: -1434802.230595
EM: Round [243] log likelihood: -1434802.230451
EM: Round [244] log likelihood: -1434802.230309
EM: Round [245] log likelihood: -1434802.230170
EM: Round [246] log likelihood: -1434802.230034
EM: Round [247] log likelihood: -1434802.229900
EM: Round [248] log likelihood: -1434802.229769
EM: Round [249] log likelihood: -1434802.229640
EM: Round [250] log likelihood: -1434802.229513
EM: Round [251] log likelihood: -1434802.229388
EM: Round [252] log likelihood: -1434802.229266
EM: Round [253] log likelihood: -1434802.229146
EM: Round [254] log likelihood: -1434802.229028
EM: Round [255] log likelihood: -1434802.228912
EM: Round [256] log likelihood: -1434802.228799
EM: Round [257] log likelihood: -1434802.228687
EM: Round [258] log likelihood: -1434802.228577
EM: Round [259] log likelihood: -1434802.228470
EM: Round [260] log likelihood: -1434802.228364
EM: Round [261] log likelihood: -1434802.228260
EM: Round [262] log likelihood: -1434802.228158
EM: Round [263] log likelihood: -1434802.228058
EM: Round [264] log likelihood: -1434802.227959
EM: Stopping iterations at round 264 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -1433284.665589
EM: Round [1] log likelihood: -1433147.606846
EM: Round [2] log likelihood: -1433104.985359
EM: Round [3] log likelihood: -1433086.042508
EM: Round [4] log likelihood: -1433076.286227
EM: Round [5] log likelihood: -1433070.821985
EM: Round [6] log likelihood: -1433067.552472
EM: Round [7] log likelihood: -1433065.470957
EM: Round [8] log likelihood: -1433064.064766
EM: Round [9] log likelihood: -1433063.061976
EM: Round [10] log likelihood: -1433062.312835
EM: Round [11] log likelihood: -1433061.731524
EM: Round [12] log likelihood: -1433061.266694
EM: Round [13] log likelihood: -1433060.886197
EM: Round [14] log likelihood: -1433060.568973
EM: Round [15] log likelihood: -1433060.300625
EM: Round [16] log likelihood: -1433060.070924
EM: Round [17] log likelihood: -1433059.872361
EM: Round [18] log likelihood: -1433059.699267
EM: Round [19] log likelihood: -1433059.547269
EM: Round [20] log likelihood: -1433059.412925
EM: Round [21] log likelihood: -1433059.293492
EM: Round [22] log likelihood: -1433059.186751
EM: Round [23] log likelihood: -1433059.090888
EM: Round [24] log likelihood: -1433059.004410
EM: Round [25] log likelihood: -1433058.926076
EM: Round [26] log likelihood: -1433058.854846
EM: Round [27] log likelihood: -1433058.789845
EM: Round [28] log likelihood: -1433058.730332
EM: Round [29] log likelihood: -1433058.675674
EM: Round [30] log likelihood: -1433058.625331
EM: Round [31] log likelihood: -1433058.578839
EM: Round [32] log likelihood: -1433058.535793
EM: Round [33] log likelihood: -1433058.495847
EM: Round [34] log likelihood: -1433058.458696
EM: Round [35] log likelihood: -1433058.424073
EM: Round [36] log likelihood: -1433058.391746
EM: Round [37] log likelihood: -1433058.361509
EM: Round [38] log likelihood: -1433058.333179
EM: Round [39] log likelihood: -1433058.306596
EM: Round [40] log likelihood: -1433058.281616
EM: Round [41] log likelihood: -1433058.258111
EM: Round [42] log likelihood: -1433058.235966
EM: Round [43] log likelihood: -1433058.215077
EM: Round [44] log likelihood: -1433058.195352
EM: Round [45] log likelihood: -1433058.176707
EM: Round [46] log likelihood: -1433058.159066
EM: Round [47] log likelihood: -1433058.142360
EM: Round [48] log likelihood: -1433058.126526
EM: Round [49] log likelihood: -1433058.111506
EM: Round [50] log likelihood: -1433058.097250
EM: Round [51] log likelihood: -1433058.083707
EM: Round [52] log likelihood: -1433058.070835
EM: Round [53] log likelihood: -1433058.058593
EM: Round [54] log likelihood: -1433058.046942
EM: Round [55] log likelihood: -1433058.035850
EM: Round [56] log likelihood: -1433058.025282
EM: Round [57] log likelihood: -1433058.015211
EM: Round [58] log likelihood: -1433058.005608
EM: Round [59] log likelihood: -1433057.996448
EM: Round [60] log likelihood: -1433057.987706
EM: Round [61] log likelihood: -1433057.979360
EM: Round [62] log likelihood: -1433057.971390
EM: Round [63] log likelihood: -1433057.963777
EM: Round [64] log likelihood: -1433057.956500
EM: Round [65] log likelihood: -1433057.949545
EM: Round [66] log likelihood: -1433057.942894
EM: Round [67] log likelihood: -1433057.936532
EM: Round [68] log likelihood: -1433057.930446
EM: Round [69] log likelihood: -1433057.924622
EM: Round [70] log likelihood: -1433057.919046
EM: Round [71] log likelihood: -1433057.913708
EM: Round [72] log likelihood: -1433057.908597
EM: Round [73] log likelihood: -1433057.903700
EM: Round [74] log likelihood: -1433057.899009
EM: Round [75] log likelihood: -1433057.894514
EM: Round [76] log likelihood: -1433057.890206
EM: Round [77] log likelihood: -1433057.886076
EM: Round [78] log likelihood: -1433057.882116
EM: Round [79] log likelihood: -1433057.878319
EM: Round [80] log likelihood: -1433057.874678
EM: Round [81] log likelihood: -1433057.871185
EM: Round [82] log likelihood: -1433057.867834
EM: Round [83] log likelihood: -1433057.864618
EM: Round [84] log likelihood: -1433057.861532
EM: Round [85] log likelihood: -1433057.858571
EM: Round [86] log likelihood: -1433057.855728
EM: Round [87] log likelihood: -1433057.852998
EM: Round [88] log likelihood: -1433057.850378
EM: Round [89] log likelihood: -1433057.847861
EM: Round [90] log likelihood: -1433057.845444
EM: Round [91] log likelihood: -1433057.843122
EM: Round [92] log likelihood: -1433057.840892
EM: Round [93] log likelihood: -1433057.838750
EM: Round [94] log likelihood: -1433057.836691
EM: Round [95] log likelihood: -1433057.834713
EM: Round [96] log likelihood: -1433057.832812
EM: Round [97] log likelihood: -1433057.830984
EM: Round [98] log likelihood: -1433057.829228
EM: Round [99] log likelihood: -1433057.827539
EM: Round [100] log likelihood: -1433057.825916
EM: Round [101] log likelihood: -1433057.824355
EM: Round [102] log likelihood: -1433057.822854
EM: Round [103] log likelihood: -1433057.821410
EM: Round [104] log likelihood: -1433057.820022
EM: Round [105] log likelihood: -1433057.818687
EM: Round [106] log likelihood: -1433057.817402
EM: Round [107] log likelihood: -1433057.816166
EM: Round [108] log likelihood: -1433057.814977
EM: Round [109] log likelihood: -1433057.813833
EM: Round [110] log likelihood: -1433057.812732
EM: Round [111] log likelihood: -1433057.811673
EM: Round [112] log likelihood: -1433057.810653
EM: Round [113] log likelihood: -1433057.809671
EM: Round [114] log likelihood: -1433057.808727
EM: Round [115] log likelihood: -1433057.807817
EM: Round [116] log likelihood: -1433057.806942
EM: Round [117] log likelihood: -1433057.806098
EM: Round [118] log likelihood: -1433057.805287
EM: Round [119] log likelihood: -1433057.804505
EM: Round [120] log likelihood: -1433057.803752
EM: Round [121] log likelihood: -1433057.803027
EM: Round [122] log likelihood: -1433057.802328
EM: Round [123] log likelihood: -1433057.801656
EM: Round [124] log likelihood: -1433057.801008
EM: Round [125] log likelihood: -1433057.800383
EM: Round [126] log likelihood: -1433057.799782
EM: Round [127] log likelihood: -1433057.799202
EM: Round [128] log likelihood: -1433057.798643
EM: Round [129] log likelihood: -1433057.798105
EM: Round [130] log likelihood: -1433057.797586
EM: Round [131] log likelihood: -1433057.797086
EM: Round [132] log likelihood: -1433057.796604
EM: Round [133] log likelihood: -1433057.796139
EM: Round [134] log likelihood: -1433057.795691
EM: Round [135] log likelihood: -1433057.795259
EM: Round [136] log likelihood: -1433057.794843
EM: Round [137] log likelihood: -1433057.794441
EM: Round [138] log likelihood: -1433057.794054
EM: Round [139] log likelihood: -1433057.793681
EM: Round [140] log likelihood: -1433057.793321
EM: Round [141] log likelihood: -1433057.792973
EM: Round [142] log likelihood: -1433057.792638
EM: Round [143] log likelihood: -1433057.792315
EM: Round [144] log likelihood: -1433057.792003
EM: Round [145] log likelihood: -1433057.791702
EM: Round [146] log likelihood: -1433057.791411
EM: Round [147] log likelihood: -1433057.791131
EM: Round [148] log likelihood: -1433057.790861
EM: Round [149] log likelihood: -1433057.790600
EM: Round [150] log likelihood: -1433057.790348
EM: Round [151] log likelihood: -1433057.790105
EM: Round [152] log likelihood: -1433057.789870
EM: Round [153] log likelihood: -1433057.789643
EM: Round [154] log likelihood: -1433057.789424
EM: Round [155] log likelihood: -1433057.789213
EM: Round [156] log likelihood: -1433057.789009
EM: Round [157] log likelihood: -1433057.788812
EM: Round [158] log likelihood: -1433057.788622
EM: Round [159] log likelihood: -1433057.788438
EM: Round [160] log likelihood: -1433057.788260
EM: Round [161] log likelihood: -1433057.788089
EM: Round [162] log likelihood: -1433057.787923
EM: Round [163] log likelihood: -1433057.787763
EM: Round [164] log likelihood: -1433057.787608
EM: Round [165] log likelihood: -1433057.787459
EM: Round [166] log likelihood: -1433057.787314
EM: Round [167] log likelihood: -1433057.787175
EM: Round [168] log likelihood: -1433057.787040
EM: Round [169] log likelihood: -1433057.786909
EM: Round [170] log likelihood: -1433057.786783
EM: Round [171] log likelihood: -1433057.786661
EM: Round [172] log likelihood: -1433057.786543
EM: Round [173] log likelihood: -1433057.786429
EM: Round [174] log likelihood: -1433057.786319
EM: Round [175] log likelihood: -1433057.786212
EM: Round [176] log likelihood: -1433057.786109
EM: Round [177] log likelihood: -1433057.786009
EM: Stopping iterations at round 177 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.zSfy6mrX3H/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.zSfy6mrX3H/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.zSfy6mrX3H/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20
CMD: cp /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 102762022 > /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.zSfy6mrX3H/ctat_genome_lib_build_dir > /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.zSfy6mrX3H/ctat_genome_lib_build_dir --annotate /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.zSfy6mrX3H/ctat_genome_lib_build_dir
-done, see /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.zSfy6mrX3H/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 796, filtered: 5757)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.zSfy6mrX3H/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.zSfy6mrX3H/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000181126.13]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
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WARNING, no entry stored in dbm for [ENSG00000284639.1]
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WARNING, no entry stored in dbm for [ENSG00000234996.4]
WARNING, no entry stored in dbm for [ENSG00000228340.6]
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WARNING, no entry stored in dbm for [ENSG00000230239.1]
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WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
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WARNING, no entry stored in dbm for [ENSG00000284648.1]
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WARNING, no entry stored in dbm for [ENSG00000254485.5]
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WARNING, no entry stored in dbm for [ENSG00000276375.1]
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WARNING, no entry stored in dbm for [ENSG00000230565.1]
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WARNING, no entry stored in dbm for [ENSG00000248858.7]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
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WARNING, no entry stored in dbm for [ENSG00000188029.8]
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WARNING, no entry stored in dbm for [ENSG00000189136.9]
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WARNING, no entry stored in dbm for [ENSG00000108448.22]
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WARNING, no entry stored in dbm for [ENSG00000180438.15]
WARNING, no entry stored in dbm for [ENSG00000272686.1]
WARNING, no entry stored in dbm for [ENSG00000272084.1]
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WARNING, no entry stored in dbm for [ENSG00000243877.1]
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WARNING, no entry stored in dbm for [ENSG00000236596.1]
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WARNING, no entry stored in dbm for [ENSG00000181984.11]
WARNING, no entry stored in dbm for [ENSG00000286694.1]
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WARNING, no entry stored in dbm for [ENSG00000269893.8]
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WARNING, no entry stored in dbm for [ENSG00000180747.15]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000279281.1]
WARNING, no entry stored in dbm for [ENSG00000226419.8]
WARNING, no entry stored in dbm for [ENSG00000222041.11]
WARNING, no entry stored in dbm for [ENSG00000206755.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000223245.1]
WARNING, no entry stored in dbm for [ENSG00000197301.7]
WARNING, no entry stored in dbm for [ENSG00000182841.12]
WARNING, no entry stored in dbm for [ENSG00000241556.1]
WARNING, no entry stored in dbm for [ENSG00000240087.3]
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WARNING, no entry stored in dbm for [ENSG00000240342.3]
WARNING, no entry stored in dbm for [ENSG00000275014.1]
WARNING, no entry stored in dbm for [ENSG00000230629.2]
WARNING, no entry stored in dbm for [ENSG00000242608.1]
WARNING, no entry stored in dbm for [ENSG00000232794.1]
WARNING, no entry stored in dbm for [ENSG00000254369.6]
WARNING, no entry stored in dbm for [ENSG00000199426.1]
WARNING, no entry stored in dbm for [ENSG00000240233.3]
WARNING, no entry stored in dbm for [ENSG00000278834.1]
WARNING, no entry stored in dbm for [ENSG00000273658.1]
WARNING, no entry stored in dbm for [ENSG00000232104.3]
WARNING, no entry stored in dbm for [ENSG00000205181.7]
WARNING, no entry stored in dbm for [ENSG00000259856.1]
WARNING, no entry stored in dbm for [ENSG00000260034.1]
WARNING, no entry stored in dbm for [ENSG00000250337.7]
WARNING, no entry stored in dbm for [ENSG00000248927.1]
WARNING, no entry stored in dbm for [ENSG00000273628.1]
WARNING, no entry stored in dbm for [ENSG00000247828.8]
WARNING, no entry stored in dbm for [ENSG00000078319.10]
WARNING, no entry stored in dbm for [ENSG00000272888.7]
WARNING, no entry stored in dbm for [ENSG00000230424.1]
WARNING, no entry stored in dbm for [ENSG00000228158.2]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000287419.1]
WARNING, no entry stored in dbm for [ENSG00000239883.8]
WARNING, no entry stored in dbm for [ENSG00000215068.8]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000257221.4]
WARNING, no entry stored in dbm for [ENSG00000272034.1]
WARNING, no entry stored in dbm for [ENSG00000165121.11]
WARNING, no entry stored in dbm for [ENSG00000205361.8]
WARNING, no entry stored in dbm for [ENSG00000210049.1]
WARNING, no entry stored in dbm for [ENSG00000267892.1]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000224870.7]
WARNING, no entry stored in dbm for [ENSG00000228526.7]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000243797.6]
WARNING, no entry stored in dbm for [ENSG00000227128.5]
WARNING, no entry stored in dbm for [ENSG00000226548.1]
WARNING, no entry stored in dbm for [ENSG00000254332.1]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000277047.5]
WARNING, no entry stored in dbm for [ENSG00000248238.2]
WARNING, no entry stored in dbm for [ENSG00000237491.10]
WARNING, no entry stored in dbm for [ENSG00000228918.4]
WARNING, no entry stored in dbm for [ENSG00000260468.1]
WARNING, no entry stored in dbm for [ENSG00000228794.10]
WARNING, no entry stored in dbm for [ENSG00000237248.5]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000226067.7]
WARNING, no entry stored in dbm for [ENSG00000258279.4]
WARNING, no entry stored in dbm for [ENSG00000235532.1]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000231203.1]
WARNING, no entry stored in dbm for [ENSG00000228666.1]
WARNING, no entry stored in dbm for [ENSG00000233652.1]
WARNING, no entry stored in dbm for [ENSG00000286176.2]
WARNING, no entry stored in dbm for [ENSG00000286675.1]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000257576.1]
WARNING, no entry stored in dbm for [ENSG00000166530.8]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000233299.1]
WARNING, no entry stored in dbm for [ENSG00000214182.5]
WARNING, no entry stored in dbm for [ENSG00000234771.3]
WARNING, no entry stored in dbm for [ENSG00000273628.1]
WARNING, no entry stored in dbm for [ENSG00000266369.1]
WARNING, no entry stored in dbm for [ENSG00000240014.3]
WARNING, no entry stored in dbm for [ENSG00000180389.7]
WARNING, no entry stored in dbm for [ENSG00000283544.1]
WARNING, no entry stored in dbm for [ENSG00000254349.6]
WARNING, no entry stored in dbm for [ENSG00000237877.7]
WARNING, no entry stored in dbm for [ENSG00000176868.2]
WARNING, no entry stored in dbm for [ENSG00000204832.10]
WARNING, no entry stored in dbm for [ENSG00000256029.6]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000278733.1]
WARNING, no entry stored in dbm for [ENSG00000260565.7]
WARNING, no entry stored in dbm for [ENSG00000231231.5]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000213235.3]
WARNING, no entry stored in dbm for [ENSG00000243701.7]
WARNING, no entry stored in dbm for [ENSG00000245750.10]
WARNING, no entry stored in dbm for [ENSG00000215089.3]
WARNING, no entry stored in dbm for [ENSG00000237187.9]
WARNING, no entry stored in dbm for [ENSG00000204352.4]
WARNING, no entry stored in dbm for [ENSG00000201901.1]
WARNING, no entry stored in dbm for [ENSG00000233755.1]
WARNING, no entry stored in dbm for [ENSG00000235244.4]
WARNING, no entry stored in dbm for [ENSG00000228824.7]
WARNING, no entry stored in dbm for [ENSG00000276710.4]
WARNING, no entry stored in dbm for [ENSG00000267370.1]
WARNING, no entry stored in dbm for [ENSG00000213598.4]
WARNING, no entry stored in dbm for [ENSG00000260896.6]
WARNING, no entry stored in dbm for [ENSG00000236197.4]
WARNING, no entry stored in dbm for [ENSG00000256898.1]
WARNING, no entry stored in dbm for [ENSG00000228793.2]
WARNING, no entry stored in dbm for [ENSG00000272736.5]
WARNING, no entry stored in dbm for [ENSG00000224186.8]
WARNING, no entry stored in dbm for [ENSG00000231079.7]
WARNING, no entry stored in dbm for [ENSG00000228775.8]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
WARNING, no entry stored in dbm for [ENSG00000260461.1]
WARNING, no entry stored in dbm for [ENSG00000260902.1]
WARNING, no entry stored in dbm for [ENSG00000263647.1]
WARNING, no entry stored in dbm for [ENSG00000237238.3]
WARNING, no entry stored in dbm for [ENSG00000204960.7]
WARNING, no entry stored in dbm for [ENSG00000227615.1]
WARNING, no entry stored in dbm for [ENSG00000242808.10]
WARNING, no entry stored in dbm for [ENSG00000223794.1]
WARNING, no entry stored in dbm for [ENSG00000228028.2]
WARNING, no entry stored in dbm for [ENSG00000204352.4]
WARNING, no entry stored in dbm for [ENSG00000286974.1]
WARNING, no entry stored in dbm for [ENSG00000284639.1]
WARNING, no entry stored in dbm for [ENSG00000232677.9]
WARNING, no entry stored in dbm for [ENSG00000280143.1]
WARNING, no entry stored in dbm for [ENSG00000279549.1]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000273018.7]
WARNING, no entry stored in dbm for [ENSG00000259357.2]
WARNING, no entry stored in dbm for [ENSG00000240291.1]
WARNING, no entry stored in dbm for [ENSG00000285280.2]
WARNING, no entry stored in dbm for [ENSG00000257759.2]
WARNING, no entry stored in dbm for [ENSG00000236887.1]
WARNING, no entry stored in dbm for [ENSG00000253183.1]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000246203.2]
WARNING, no entry stored in dbm for [ENSG00000286699.1]
WARNING, no entry stored in dbm for [ENSG00000288583.1]
WARNING, no entry stored in dbm for [ENSG00000287368.1]
WARNING, no entry stored in dbm for [ENSG00000231010.1]
WARNING, no entry stored in dbm for [ENSG00000270792.6]
WARNING, no entry stored in dbm for [ENSG00000226526.1]
WARNING, no entry stored in dbm for [ENSG00000235613.2]
WARNING, no entry stored in dbm for [ENSG00000204790.9]
WARNING, no entry stored in dbm for [ENSG00000279058.2]
WARNING, no entry stored in dbm for [ENSG00000230894.2]
WARNING, no entry stored in dbm for [ENSG00000272734.1]
WARNING, no entry stored in dbm for [ENSG00000227893.1]
WARNING, no entry stored in dbm for [ENSG00000249738.10]
WARNING, no entry stored in dbm for [ENSG00000233208.6]
WARNING, no entry stored in dbm for [ENSG00000234369.1]
WARNING, no entry stored in dbm for [ENSG00000235181.1]
WARNING, no entry stored in dbm for [ENSG00000170858.10]
WARNING, no entry stored in dbm for [ENSG00000279047.4]
WARNING, no entry stored in dbm for [ENSG00000284964.1]
WARNING, no entry stored in dbm for [ENSG00000274423.1]
WARNING, no entry stored in dbm for [ENSG00000244459.2]
WARNING, no entry stored in dbm for [ENSG00000250999.2]
WARNING, no entry stored in dbm for [ENSG00000232748.3]
WARNING, no entry stored in dbm for [ENSG00000256364.1]
WARNING, no entry stored in dbm for [ENSG00000243295.2]
WARNING, no entry stored in dbm for [ENSG00000250118.1]
WARNING, no entry stored in dbm for [ENSG00000228830.1]
WARNING, no entry stored in dbm for [ENSG00000274653.1]
WARNING, no entry stored in dbm for [ENSG00000261444.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000225416.1]
WARNING, no entry stored in dbm for [ENSG00000227753.3]
WARNING, no entry stored in dbm for [ENSG00000267042.1]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000251378.1]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000265750.1]
WARNING, no entry stored in dbm for [ENSG00000259375.1]
WARNING, no entry stored in dbm for [ENSG00000253220.2]
WARNING, no entry stored in dbm for [ENSG00000261184.3]
WARNING, no entry stored in dbm for [ENSG00000282732.1]
WARNING, no entry stored in dbm for [ENSG00000224365.1]
WARNING, no entry stored in dbm for [ENSG00000231359.3]
WARNING, no entry stored in dbm for [ENSG00000213942.3]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000287243.2]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000259433.2]
WARNING, no entry stored in dbm for [ENSG00000229212.8]
WARNING, no entry stored in dbm for [ENSG00000189136.9]
WARNING, no entry stored in dbm for [ENSG00000223703.1]
WARNING, no entry stored in dbm for [ENSG00000267277.1]
WARNING, no entry stored in dbm for [ENSG00000279035.1]
WARNING, no entry stored in dbm for [ENSG00000207475.1]
WARNING, no entry stored in dbm for [ENSG00000257764.2]
WARNING, no entry stored in dbm for [ENSG00000229852.4]
WARNING, no entry stored in dbm for [ENSG00000229915.1]
WARNING, no entry stored in dbm for [ENSG00000265136.1]
WARNING, no entry stored in dbm for [ENSG00000285106.2]
WARNING, no entry stored in dbm for [ENSG00000288604.1]
WARNING, no entry stored in dbm for [ENSG00000279069.1]
WARNING, no entry stored in dbm for [ENSG00000239470.3]
WARNING, no entry stored in dbm for [ENSG00000260599.1]
WARNING, no entry stored in dbm for [ENSG00000267589.1]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000272109.2]
WARNING, no entry stored in dbm for [ENSG00000244331.1]
WARNING, no entry stored in dbm for [ENSG00000243304.3]
WARNING, no entry stored in dbm for [ENSG00000257221.4]
WARNING, no entry stored in dbm for [ENSG00000259962.1]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000277458.1]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000263345.1]
WARNING, no entry stored in dbm for [ENSG00000261786.1]
WARNING, no entry stored in dbm for [ENSG00000236531.2]
WARNING, no entry stored in dbm for [ENSG00000266869.2]
WARNING, no entry stored in dbm for [ENSG00000287249.1]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000262482.1]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
* STAR-Fusion complete. See output: /tmp/nxf.zSfy6mrX3H/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)