.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (1173_FM_T1_RNA_SLD_01_A23T55JLT4_2)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/70/c6f5d2d79b21a632ea3bab71a94996/.command.log
Size: 720 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (1173_FM_T1_RNA_SLD_01_A23T55JLT4_2)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/03/3c082867dc57046919a53565a983d5/1173_FM_T1_RNA_SLD_01_A23T55JLT4_2.md.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/70/c6f5d2d79b21a632ea3bab71a94996/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/70/c6f5d2d79b21a632ea3bab71a94996/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/03/3c082867dc57046919a53565a983d5/1173_FM_T1_RNA_SLD_01_A23T55JLT4_2.md.bam
==> STAGING COMPLETE (4 inputs)

+ seqtool saturation -region chr20 1173_FM_T1_RNA_SLD_01_A23T55JLT4_2.md.bam
[W::hts_idx_load3] The index file is older than the data file: 1173_FM_T1_RNA_SLD_01_A23T55JLT4_2.md.bai