Done.
-parsing GTF file: /tmp/nxf.qK299E5g7p/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.gtf
* Running CMD: /usr/local/bin/STAR --runThreadN 8 --genomeDir /tmp/nxf.qK299E5g7p/ctat_genome_lib_build_dir/ref_genome.fa.star.idx --outSAMtype BAM SortedByCoordinate --twopassMode None --alignSJDBoverhangMin 10 --genomeSuffixLengthMax 10000 --limitBAMsortRAM 47271261705 --alignInsertionFlush Right --alignMatesGapMax 100000 --alignIntronMax 100000 --outSAMattributes All --readFilesIn /tmp/nxf.qK299E5g7p/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1_1.fastp.fastq.gz /tmp/nxf.qK299E5g7p/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1_2.fastp.fastq.gz --genomeFastaFiles /tmp/nxf.qK299E5g7p/fi_workdir/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.fa --outSAMfilter KeepAllAddedReferences --sjdbGTFfile /tmp/nxf.qK299E5g7p/fi_workdir/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.gtf --alignSJstitchMismatchNmax 5 -1 5 5 --scoreGapNoncan -6 --readFilesCommand 'gunzip -c'
* Running CMD: mv Aligned.sortedByCoord.out.bam 1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.star.sortedByCoord.out.bam
* Running CMD: samtools index 1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.star.sortedByCoord.out.bam
11:59:09 : INFO : Done.
-parsing GTF file: /tmp/nxf.qK299E5g7p/fi_workdir/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.gtf
-parsing /tmp/nxf.qK299E5g7p/fi_workdir/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.star.cSorted.dupsMarked.bam
[10000]
[20000]
[30000]
[40000]
[50000]
[60000]
[70000]
[80000]
[90000]
[100000]
[110000]
[120000]
[130000]
[140000]
[150000]
[160000]
[170000]
[180000]
[190000]
[200000]
[210000]
[220000]
[230000]
[240000]
[250000]
[260000]
[270000]
[280000]
[290000]
[300000]
[310000]
[320000]
[330000]
[340000]
[350000]
[360000]
[370000]
[380000]
[390000]
[400000]
[410000]
[420000]
[430000]
[440000]
[450000]
[460000]
[470000]
[480000]
[490000]
[500000]
[510000]
[520000]
[530000]
[540000]
[550000]
[560000]
[570000]
[580000]
[590000]
[600000]
[610000]
[620000]
[630000]
[640000]
[650000]
[660000]
[670000]
[680000]
[690000]
[700000]
[710000]
[720000]
[730000]
[740000]
[750000]
[760000]
[770000]
[780000]
[790000]
[800000]
[810000]
[820000]
[830000]
[840000]
[850000]
[860000]
[870000]
[880000]
[890000]
[900000]
[910000]
[920000]
[930000]
[940000]
[950000]
[960000]
[970000]
[980000]
[990000]
[1000000]
[1010000]
[1020000]
[1030000]
[1040000]
[1050000]
[1060000]
[1070000]
[1080000]
[1090000]
[1100000]
[1110000]
[1120000]
[1130000]
[1140000]
[1150000]
[1160000]
[1170000]
[1180000]
[1190000]
[1200000]
[1210000]
[1220000]
[1230000]
[1240000]
[1250000]
[1260000]
[1270000]
[1280000]
[1290000]
[1300000]
[1310000]
[1320000]
[1330000]
[1340000]
[1350000]
[1360000]
[1370000]
[1380000]
[1390000]
[1400000]
[1410000]
[1420000]
[1430000]
[1440000]
[1450000]
[1460000]
[1470000]
[1480000]
[1490000]
[1500000]
[1510000]
[1520000]
[1530000]
[1540000]
[1550000]
[1560000]
[1570000]
[1580000]
[1590000]
[1600000]
[1610000]
[1620000]
[1630000]
[1640000]
[1650000]
[1660000]
[1670000]
[1680000]
[1690000]
[1700000]
[1710000]
[1720000]
[1730000]
[1740000]
[1750000]
[1760000]
[1770000]
[1780000]
[1790000]
[1800000]
[1810000]
[1820000]
[1830000]
[1840000]
[1850000]
[1860000]
[1870000]
[1880000]
[1890000]
[1900000]
[1910000]
[1920000]
[1930000]
[1940000]
[1950000]
[1960000]
[1970000]
[1980000]
[1990000]
[2000000]
[2010000]
[2020000]
[2030000]
[2040000]
[2050000]
[2060000]
[2070000]
[2080000]
[2090000]
[2100000]
[2110000]
[2120000]
[2130000]
[2140000]
[2150000]
[2160000]
[2170000]
[2180000]
[2190000]
[2200000]
[2210000]
[2220000]
[2230000]
[2240000]
[2250000]
[2260000]
[2270000]
[2280000]
[2290000]
[2300000]
[2310000]
[2320000]
[2330000]
[2340000]
[2350000]
[2360000]
[2370000]
[2380000]
[2390000]
[2400000]
[2410000]
[2420000]
[2430000]
[2440000]
[2450000]
[2460000]
[2470000]
[2480000]
[2490000]
[2500000]
[2510000]
[2520000]
[2530000]
[2540000]
[2550000]
[2560000]
[2570000]
[2580000] -done parsing /tmp/nxf.qK299E5g7p/fi_workdir/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.star.cSorted.dupsMarked.bam. Extracting junction info.
junction read elimination tally: $VAR1 = {
'num_hits: 6 != num_counted_on_fusion_contigs 4 ' => 24,
'num genes matched < 2' => 17,
'low complexity anchor region' => 48,
'small anchor length' => 38,
'num_hits: 2 != num_counted_on_fusion_contigs 1 ' => 85,
'seq-similar region overlap' => 269,
'num_hits: 3 != num_counted_on_fusion_contigs 2 ' => 34,
'num_hits: 5 != num_counted_on_fusion_contigs 1 ' => 1,
'per_id < 96' => 9631,
'excessive soft clipping' => 14146,
'num_hits: 5 != num_counted_on_fusion_contigs 3 ' => 12,
'num_hits: 8 != num_counted_on_fusion_contigs 4 ' => 24,
' ** passed ** ' => 15919,
'num_hits: 3 != num_counted_on_fusion_contigs 1 ' => 2373,
'num_hits: 6 != num_counted_on_fusion_contigs 1 ' => 1
};
-writing fusion junction support info.
-outputting the spanning read info: /tmp/nxf.qK299E5g7p/fi_workdir/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.star.cSorted.dupsMarked.bam.fusion_spanning_info.
- counting read alignments among fusion contigs.
[1000]
[2000]
[3000]
[4000] -fusion SPANNING read extraction for scaff: AP001347.1--ANKRD20A11P
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000] -fusion SPANNING read extraction for scaff: CDK14--KCNAB1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000] -fusion SPANNING read extraction for scaff: CRY1--RPAP3
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000] -fusion SPANNING read extraction for scaff: GOLGA6L10--GOLGA2P6
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000] -fusion SPANNING read extraction for scaff: HIBADH--CPVL
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000] -fusion SPANNING read extraction for scaff: MARK2--PPM1D
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000] -fusion SPANNING read extraction for scaff: NELFB--TRAF2
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000]
[111000]
[112000]
[113000]
[114000]
[115000]
[116000]
[117000]
[118000]
[119000]
[120000]
[121000]
[122000]
[123000]
[124000]
[125000]
[126000]
[127000]
[128000]
[129000]
[130000]
[131000]
[132000]
[133000]
[134000]
[135000]
[136000]
[137000]
[138000]
[139000]
[140000]
[141000]
[142000]
[143000]
[144000]
[145000]
[146000]
[147000]
[148000]
[149000]
[150000]
[151000]
[152000]
[153000]
[154000]
[155000]
[156000]
[157000]
[158000]
[159000]
[160000]
[161000]
[162000]
[163000]
[164000]
[165000]
[166000]
[167000]
[168000]
[169000]
[170000]
[171000]
[172000]
[173000]
[174000]
[175000]
[176000]
[177000]
[178000]
[179000]
[180000]
[181000]
[182000]
[183000]
[184000]
[185000]
[186000]
[187000]
[188000]
[189000]
[190000]
[191000]
[192000]
[193000]
[194000]
[195000]
[196000]
[197000]
[198000]
[199000]
[200000]
[201000]
[202000]
[203000]
[204000]
[205000]
[206000]
[207000]
[208000]
[209000]
[210000]
[211000]
[212000]
[213000]
[214000]
[215000]
[216000]
[217000]
[218000]
[219000]
[220000]
[221000]
[222000]
[223000]
[224000]
[225000]
[226000]
[227000]
[228000]
[229000]
[230000]
[231000]
[232000]
[233000]
[234000]
[235000]
[236000]
[237000]
[238000]
[239000]
[240000]
[241000]
[242000]
[243000]
[244000]
[245000]
[246000]
[247000]
[248000]
[249000]
[250000]
[251000]
[252000]
[253000]
[254000]
[255000]
[256000]
[257000]
[258000]
[259000]
[260000]
[261000]
[262000]
[263000]
[264000]
[265000]
[266000] -fusion SPANNING read extraction for scaff: NFIB--AL035252.5
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000]
[111000]
[112000]
[113000]
[114000]
[115000]
[116000]
[117000]
[118000] -fusion SPANNING read extraction for scaff: NOLC1--PPRC1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000] -fusion SPANNING read extraction for scaff: PCDHA11--PCDHA13
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000] -fusion SPANNING read extraction for scaff: PCDHA11--PCDHAC1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000] -fusion SPANNING read extraction for scaff: PCDHA11--PCDHAC2
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGC5
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGC4
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGA8
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGB6
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGA10
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGC3
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGA11
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGB7
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGA9
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000] -fusion SPANNING read extraction for scaff: PCDHGA2--PCDHGA12
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGC5
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGC4
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGA8
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGB6
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGA10
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGC3
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGA11
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGB7
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGA9
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000] -fusion SPANNING read extraction for scaff: PCDHGA5--PCDHGA12
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGC5
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGC4
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGA8
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGB6
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGA10
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGC3
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGA11
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGB7
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGA9
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000] -fusion SPANNING read extraction for scaff: PCDHGA6--PCDHGA12
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGC5
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGC4
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA8
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGB6
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA10
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGC3
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA11
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGB7
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA9
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000] -fusion SPANNING read extraction for scaff: PCDHGB2--PCDHGA12
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000]
[111000]
[112000]
[113000]
[114000]
[115000]
[116000]
[117000]
[118000]
[119000]
[120000]
[121000]
[122000]
[123000]
[124000]
[125000]
[126000]
[127000]
[128000]
[129000]
[130000]
[131000]
[132000]
[133000]
[134000]
[135000]
[136000]
[137000]
[138000]
[139000]
[140000]
[141000]
[142000]
[143000]
[144000]
[145000]
[146000]
[147000] -fusion SPANNING read extraction for scaff: PPP5C--TSHZ2
[1000]
[2000]
[3000] -fusion SPANNING read extraction for scaff: RIMS4--PGBD4P2
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000] -fusion SPANNING read extraction for scaff: STON1--GTF2A1L
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000]
[111000]
[112000]
[113000]
[114000]
[115000]
[116000]
[117000]
[118000]
[119000]
[120000]
[121000]
[122000]
[123000]
[124000]
[125000]
[126000]
[127000]
[128000]
[129000]
[130000]
[131000]
[132000]
[133000]
[134000]
[135000]
[136000]
[137000]
[138000]
[139000]
[140000]
[141000]
[142000]
[143000]
[144000]
[145000]
[146000]
[147000]
[148000]
[149000]
[150000]
[151000]
[152000] -fusion SPANNING read extraction for scaff: STX16--NPEPL1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000] -fusion SPANNING read extraction for scaff: TLK2--AC240565.1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000] -fusion SPANNING read extraction for scaff: TLK2P1--AC110079.1
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000]
[104000]
[105000]
[106000]
[107000]
[108000]
[109000]
[110000]
[111000]
[112000]
[113000]
[114000]
[115000]
[116000]
[117000]
[118000]
[119000]
[120000]
[121000]
[122000]
[123000]
[124000]
[125000]
[126000] -fusion SPANNING read extraction for scaff: TSHZ2--HIF3A
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000] -fusion SPANNING read extraction for scaff: TVP23C--CDRT4
[1000]
[2000]
[3000]
[4000]
[5000] -fusion SPANNING read extraction for scaff: USP2-AS1--MFRP
[1000]
[2000]
[3000]
[4000]
[5000]
[6000]
[7000]
[8000]
[9000]
[10000]
[11000]
[12000]
[13000]
[14000]
[15000]
[16000]
[17000]
[18000]
[19000]
[20000]
[21000]
[22000]
[23000]
[24000]
[25000]
[26000]
[27000]
[28000]
[29000]
[30000]
[31000]
[32000]
[33000]
[34000]
[35000]
[36000]
[37000]
[38000]
[39000]
[40000]
[41000]
[42000]
[43000]
[44000]
[45000]
[46000]
[47000]
[48000]
[49000]
[50000]
[51000]
[52000]
[53000]
[54000]
[55000]
[56000]
[57000]
[58000]
[59000]
[60000]
[61000]
[62000]
[63000]
[64000]
[65000]
[66000]
[67000]
[68000]
[69000]
[70000]
[71000]
[72000]
[73000]
[74000]
[75000]
[76000]
[77000]
[78000]
[79000]
[80000]
[81000]
[82000]
[83000]
[84000]
[85000]
[86000]
[87000]
[88000]
[89000]
[90000]
[91000]
[92000]
[93000]
[94000]
[95000]
[96000]
[97000]
[98000]
[99000]
[100000]
[101000]
[102000]
[103000] -fusion SPANNING read extraction for scaff: VPS13A--PCSK5
-filtered reads reasons: $VAR1 = {
'seq similar region alignment' => 121800,
'lacks exon overlap' => 7423
};
EM: Starting log likelihood: -9363.085021
EM: Round [1] log likelihood: -9361.712357
EM: Round [2] log likelihood: -9360.559727
EM: Round [3] log likelihood: -9359.565190
EM: Round [4] log likelihood: -9358.691235
EM: Round [5] log likelihood: -9357.912432
EM: Round [6] log likelihood: -9357.210732
EM: Round [7] log likelihood: -9356.572897
EM: Round [8] log likelihood: -9355.988951
EM: Round [9] log likelihood: -9355.451206
EM: Round [10] log likelihood: -9354.953615
EM: Round [11] log likelihood: -9354.491335
EM: Round [12] log likelihood: -9354.060423
EM: Round [13] log likelihood: -9353.657613
EM: Round [14] log likelihood: -9353.280167
EM: Round [15] log likelihood: -9352.925750
EM: Round [16] log likelihood: -9352.592352
EM: Round [17] log likelihood: -9352.278220
EM: Round [18] log likelihood: -9351.981811
EM: Round [19] log likelihood: -9351.701755
EM: Round [20] log likelihood: -9351.436827
EM: Round [21] log likelihood: -9351.185921
EM: Round [22] log likelihood: -9350.948039
EM: Round [23] log likelihood: -9350.722273
EM: Round [24] log likelihood: -9350.507793
EM: Round [25] log likelihood: -9350.303842
EM: Round [26] log likelihood: -9350.109722
EM: Round [27] log likelihood: -9349.924795
EM: Round [28] log likelihood: -9349.748471
EM: Round [29] log likelihood: -9349.580208
EM: Round [30] log likelihood: -9349.419503
EM: Round [31] log likelihood: -9349.265892
EM: Round [32] log likelihood: -9349.118948
EM: Round [33] log likelihood: -9348.978273
EM: Round [34] log likelihood: -9348.843498
EM: Round [35] log likelihood: -9348.714283
EM: Round [36] log likelihood: -9348.590310
EM: Round [37] log likelihood: -9348.471285
EM: Round [38] log likelihood: -9348.356934
EM: Round [39] log likelihood: -9348.247002
EM: Round [40] log likelihood: -9348.141252
EM: Round [41] log likelihood: -9348.039462
EM: Round [42] log likelihood: -9347.941427
EM: Round [43] log likelihood: -9347.846952
EM: Round [44] log likelihood: -9347.755859
EM: Round [45] log likelihood: -9347.667977
EM: Round [46] log likelihood: -9347.583150
EM: Round [47] log likelihood: -9347.501229
EM: Round [48] log likelihood: -9347.422075
EM: Round [49] log likelihood: -9347.345558
EM: Round [50] log likelihood: -9347.271554
EM: Round [51] log likelihood: -9347.199949
EM: Round [52] log likelihood: -9347.130634
EM: Round [53] log likelihood: -9347.063507
EM: Round [54] log likelihood: -9346.998470
EM: Round [55] log likelihood: -9346.935433
EM: Round [56] log likelihood: -9346.874310
EM: Round [57] log likelihood: -9346.815018
EM: Round [58] log likelihood: -9346.757481
EM: Round [59] log likelihood: -9346.701626
EM: Round [60] log likelihood: -9346.647383
EM: Round [61] log likelihood: -9346.594687
EM: Round [62] log likelihood: -9346.543476
EM: Round [63] log likelihood: -9346.493689
EM: Round [64] log likelihood: -9346.445272
EM: Round [65] log likelihood: -9346.398171
EM: Round [66] log likelihood: -9346.352334
EM: Round [67] log likelihood: -9346.307714
EM: Round [68] log likelihood: -9346.264264
EM: Round [69] log likelihood: -9346.221940
EM: Round [70] log likelihood: -9346.180701
EM: Round [71] log likelihood: -9346.140506
EM: Round [72] log likelihood: -9346.101318
EM: Round [73] log likelihood: -9346.063100
EM: Round [74] log likelihood: -9346.025817
EM: Round [75] log likelihood: -9345.989436
EM: Round [76] log likelihood: -9345.953926
EM: Round [77] log likelihood: -9345.919256
EM: Round [78] log likelihood: -9345.885398
EM: Round [79] log likelihood: -9345.852323
EM: Round [80] log likelihood: -9345.820005
EM: Round [81] log likelihood: -9345.788418
EM: Round [82] log likelihood: -9345.757540
EM: Round [83] log likelihood: -9345.727345
EM: Round [84] log likelihood: -9345.697812
EM: Round [85] log likelihood: -9345.668920
EM: Round [86] log likelihood: -9345.640647
EM: Round [87] log likelihood: -9345.612975
EM: Round [88] log likelihood: -9345.585885
EM: Round [89] log likelihood: -9345.559358
EM: Round [90] log likelihood: -9345.533377
EM: Round [91] log likelihood: -9345.507926
EM: Round [92] log likelihood: -9345.482988
EM: Round [93] log likelihood: -9345.458549
EM: Round [94] log likelihood: -9345.434593
EM: Round [95] log likelihood: -9345.411106
EM: Round [96] log likelihood: -9345.388076
EM: Round [97] log likelihood: -9345.365487
EM: Round [98] log likelihood: -9345.343329
EM: Round [99] log likelihood: -9345.321589
EM: Round [100] log likelihood: -9345.300255
EM: Round [101] log likelihood: -9345.279316
EM: Round [102] log likelihood: -9345.258762
EM: Round [103] log likelihood: -9345.238582
EM: Round [104] log likelihood: -9345.218765
EM: Round [105] log likelihood: -9345.199303
EM: Round [106] log likelihood: -9345.180186
EM: Round [107] log likelihood: -9345.161405
EM: Round [108] log likelihood: -9345.142951
EM: Round [109] log likelihood: -9345.124817
EM: Round [110] log likelihood: -9345.106994
EM: Round [111] log likelihood: -9345.089474
EM: Round [112] log likelihood: -9345.072250
EM: Round [113] log likelihood: -9345.055315
EM: Round [114] log likelihood: -9345.038661
EM: Round [115] log likelihood: -9345.022283
EM: Round [116] log likelihood: -9345.006173
EM: Round [117] log likelihood: -9344.990325
EM: Round [118] log likelihood: -9344.974733
EM: Round [119] log likelihood: -9344.959391
EM: Round [120] log likelihood: -9344.944294
EM: Round [121] log likelihood: -9344.929436
EM: Round [122] log likelihood: -9344.914811
EM: Round [123] log likelihood: -9344.900416
EM: Round [124] log likelihood: -9344.886243
EM: Round [125] log likelihood: -9344.872289
EM: Round [126] log likelihood: -9344.858550
EM: Round [127] log likelihood: -9344.845019
EM: Round [128] log likelihood: -9344.831694
EM: Round [129] log likelihood: -9344.818569
EM: Round [130] log likelihood: -9344.805641
EM: Round [131] log likelihood: -9344.792905
EM: Round [132] log likelihood: -9344.780358
EM: Round [133] log likelihood: -9344.767996
EM: Round [134] log likelihood: -9344.755815
EM: Round [135] log likelihood: -9344.743811
EM: Round [136] log likelihood: -9344.731982
EM: Round [137] log likelihood: -9344.720323
EM: Round [138] log likelihood: -9344.708832
EM: Round [139] log likelihood: -9344.697504
EM: Round [140] log likelihood: -9344.686338
EM: Round [141] log likelihood: -9344.675330
EM: Round [142] log likelihood: -9344.664477
EM: Round [143] log likelihood: -9344.653775
EM: Round [144] log likelihood: -9344.643224
EM: Round [145] log likelihood: -9344.632819
EM: Round [146] log likelihood: -9344.622557
EM: Round [147] log likelihood: -9344.612438
EM: Round [148] log likelihood: -9344.602457
EM: Round [149] log likelihood: -9344.592612
EM: Round [150] log likelihood: -9344.582902
EM: Round [151] log likelihood: -9344.573323
EM: Round [152] log likelihood: -9344.563873
EM: Round [153] log likelihood: -9344.554551
EM: Round [154] log likelihood: -9344.545353
EM: Round [155] log likelihood: -9344.536278
EM: Round [156] log likelihood: -9344.527324
EM: Round [157] log likelihood: -9344.518489
EM: Round [158] log likelihood: -9344.509770
EM: Round [159] log likelihood: -9344.501166
EM: Round [160] log likelihood: -9344.492675
EM: Round [161] log likelihood: -9344.484295
EM: Round [162] log likelihood: -9344.476024
EM: Round [163] log likelihood: -9344.467861
EM: Round [164] log likelihood: -9344.459803
EM: Round [165] log likelihood: -9344.451849
EM: Round [166] log likelihood: -9344.443998
EM: Round [167] log likelihood: -9344.436247
EM: Round [168] log likelihood: -9344.428595
EM: Round [169] log likelihood: -9344.421041
EM: Round [170] log likelihood: -9344.413583
EM: Round [171] log likelihood: -9344.406219
EM: Round [172] log likelihood: -9344.398948
EM: Round [173] log likelihood: -9344.391769
EM: Round [174] log likelihood: -9344.384680
EM: Round [175] log likelihood: -9344.377680
EM: Round [176] log likelihood: -9344.370767
EM: Round [177] log likelihood: -9344.363941
EM: Round [178] log likelihood: -9344.357199
EM: Round [179] log likelihood: -9344.350541
EM: Round [180] log likelihood: -9344.343965
EM: Round [181] log likelihood: -9344.337470
EM: Round [182] log likelihood: -9344.331055
EM: Round [183] log likelihood: -9344.324719
EM: Round [184] log likelihood: -9344.318460
EM: Round [185] log likelihood: -9344.312278
EM: Round [186] log likelihood: -9344.306171
EM: Round [187] log likelihood: -9344.300138
EM: Round [188] log likelihood: -9344.294179
EM: Round [189] log likelihood: -9344.288291
EM: Round [190] log likelihood: -9344.282474
EM: Round [191] log likelihood: -9344.276727
EM: Round [192] log likelihood: -9344.271050
EM: Round [193] log likelihood: -9344.265440
EM: Round [194] log likelihood: -9344.259897
EM: Round [195] log likelihood: -9344.254421
EM: Round [196] log likelihood: -9344.249009
EM: Round [197] log likelihood: -9344.243662
EM: Round [198] log likelihood: -9344.238378
EM: Round [199] log likelihood: -9344.233156
EM: Round [200] log likelihood: -9344.227997
EM: Round [201] log likelihood: -9344.222897
EM: Round [202] log likelihood: -9344.217858
EM: Round [203] log likelihood: -9344.212878
EM: Round [204] log likelihood: -9344.207956
EM: Round [205] log likelihood: -9344.203091
EM: Round [206] log likelihood: -9344.198283
EM: Round [207] log likelihood: -9344.193531
EM: Round [208] log likelihood: -9344.188834
EM: Round [209] log likelihood: -9344.184192
EM: Round [210] log likelihood: -9344.179603
EM: Round [211] log likelihood: -9344.175067
EM: Round [212] log likelihood: -9344.170583
EM: Round [213] log likelihood: -9344.166151
EM: Round [214] log likelihood: -9344.161769
EM: Round [215] log likelihood: -9344.157438
EM: Round [216] log likelihood: -9344.153156
EM: Round [217] log likelihood: -9344.148922
EM: Round [218] log likelihood: -9344.144737
EM: Round [219] log likelihood: -9344.140600
EM: Round [220] log likelihood: -9344.136509
EM: Round [221] log likelihood: -9344.132465
EM: Round [222] log likelihood: -9344.128466
EM: Round [223] log likelihood: -9344.124512
EM: Round [224] log likelihood: -9344.120603
EM: Round [225] log likelihood: -9344.116737
EM: Round [226] log likelihood: -9344.112915
EM: Round [227] log likelihood: -9344.109136
EM: Round [228] log likelihood: -9344.105399
EM: Round [229] log likelihood: -9344.101703
EM: Round [230] log likelihood: -9344.098049
EM: Round [231] log likelihood: -9344.094435
EM: Round [232] log likelihood: -9344.090861
EM: Round [233] log likelihood: -9344.087327
EM: Round [234] log likelihood: -9344.083832
EM: Round [235] log likelihood: -9344.080375
EM: Round [236] log likelihood: -9344.076957
EM: Round [237] log likelihood: -9344.073576
EM: Round [238] log likelihood: -9344.070232
EM: Round [239] log likelihood: -9344.066925
EM: Round [240] log likelihood: -9344.063653
EM: Round [241] log likelihood: -9344.060418
EM: Round [242] log likelihood: -9344.057218
EM: Round [243] log likelihood: -9344.054052
EM: Round [244] log likelihood: -9344.050921
EM: Round [245] log likelihood: -9344.047824
EM: Round [246] log likelihood: -9344.044760
EM: Round [247] log likelihood: -9344.041730
EM: Round [248] log likelihood: -9344.038732
EM: Round [249] log likelihood: -9344.035766
EM: Round [250] log likelihood: -9344.032833
EM: Round [251] log likelihood: -9344.029930
EM: Round [252] log likelihood: -9344.027059
EM: Round [253] log likelihood: -9344.024219
EM: Round [254] log likelihood: -9344.021409
EM: Round [255] log likelihood: -9344.018628
EM: Round [256] log likelihood: -9344.015878
EM: Round [257] log likelihood: -9344.013156
EM: Round [258] log likelihood: -9344.010464
EM: Round [259] log likelihood: -9344.007800
EM: Round [260] log likelihood: -9344.005164
EM: Round [261] log likelihood: -9344.002556
EM: Round [262] log likelihood: -9343.999975
EM: Round [263] log likelihood: -9343.997422
EM: Round [264] log likelihood: -9343.994895
EM: Round [265] log likelihood: -9343.992395
EM: Round [266] log likelihood: -9343.989921
EM: Round [267] log likelihood: -9343.987473
EM: Round [268] log likelihood: -9343.985051
EM: Round [269] log likelihood: -9343.982654
EM: Round [270] log likelihood: -9343.980281
EM: Round [271] log likelihood: -9343.977934
EM: Round [272] log likelihood: -9343.975611
EM: Round [273] log likelihood: -9343.973311
EM: Round [274] log likelihood: -9343.971036
EM: Round [275] log likelihood: -9343.968784
EM: Round [276] log likelihood: -9343.966555
EM: Round [277] log likelihood: -9343.964349
EM: Round [278] log likelihood: -9343.962166
EM: Round [279] log likelihood: -9343.960005
EM: Round [280] log likelihood: -9343.957867
EM: Round [281] log likelihood: -9343.955750
EM: Round [282] log likelihood: -9343.953655
EM: Round [283] log likelihood: -9343.951581
EM: Round [284] log likelihood: -9343.949528
EM: Round [285] log likelihood: -9343.947497
EM: Round [286] log likelihood: -9343.945485
EM: Round [287] log likelihood: -9343.943495
EM: Round [288] log likelihood: -9343.941524
EM: Round [289] log likelihood: -9343.939573
EM: Round [290] log likelihood: -9343.937642
EM: Round [291] log likelihood: -9343.935731
EM: Round [292] log likelihood: -9343.933838
EM: Round [293] log likelihood: -9343.931965
EM: Round [294] log likelihood: -9343.930110
EM: Round [295] log likelihood: -9343.928274
EM: Round [296] log likelihood: -9343.926457
EM: Round [297] log likelihood: -9343.924657
EM: Round [298] log likelihood: -9343.922876
EM: Round [299] log likelihood: -9343.921112
EM: Round [300] log likelihood: -9343.919366
EM: Round [301] log likelihood: -9343.917637
EM: Round [302] log likelihood: -9343.915925
EM: Round [303] log likelihood: -9343.914230
EM: Round [304] log likelihood: -9343.912552
EM: Round [305] log likelihood: -9343.910890
EM: Round [306] log likelihood: -9343.909245
EM: Round [307] log likelihood: -9343.907616
EM: Round [308] log likelihood: -9343.906003
EM: Round [309] log likelihood: -9343.904406
EM: Round [310] log likelihood: -9343.902824
EM: Round [311] log likelihood: -9343.901258
EM: Round [312] log likelihood: -9343.899707
EM: Round [313] log likelihood: -9343.898171
EM: Round [314] log likelihood: -9343.896651
EM: Round [315] log likelihood: -9343.895145
EM: Round [316] log likelihood: -9343.893653
EM: Round [317] log likelihood: -9343.892176
EM: Round [318] log likelihood: -9343.890714
EM: Round [319] log likelihood: -9343.889265
EM: Round [320] log likelihood: -9343.887831
EM: Round [321] log likelihood: -9343.886410
EM: Round [322] log likelihood: -9343.885003
EM: Round [323] log likelihood: -9343.883610
EM: Round [324] log likelihood: -9343.882230
EM: Round [325] log likelihood: -9343.880863
EM: Round [326] log likelihood: -9343.879509
EM: Round [327] log likelihood: -9343.878168
EM: Round [328] log likelihood: -9343.876840
EM: Round [329] log likelihood: -9343.875525
EM: Round [330] log likelihood: -9343.874222
EM: Round [331] log likelihood: -9343.872932
EM: Round [332] log likelihood: -9343.871653
EM: Round [333] log likelihood: -9343.870387
EM: Round [334] log likelihood: -9343.869133
EM: Round [335] log likelihood: -9343.867891
EM: Round [336] log likelihood: -9343.866660
EM: Round [337] log likelihood: -9343.865441
EM: Round [338] log likelihood: -9343.864234
EM: Round [339] log likelihood: -9343.863038
EM: Round [340] log likelihood: -9343.861853
EM: Round [341] log likelihood: -9343.860679
EM: Round [342] log likelihood: -9343.859516
EM: Round [343] log likelihood: -9343.858364
EM: Round [344] log likelihood: -9343.857223
EM: Round [345] log likelihood: -9343.856093
EM: Round [346] log likelihood: -9343.854973
EM: Round [347] log likelihood: -9343.853863
EM: Round [348] log likelihood: -9343.852764
EM: Round [349] log likelihood: -9343.851674
EM: Round [350] log likelihood: -9343.850595
EM: Round [351] log likelihood: -9343.849526
EM: Round [352] log likelihood: -9343.848467
EM: Round [353] log likelihood: -9343.847418
EM: Round [354] log likelihood: -9343.846378
EM: Round [355] log likelihood: -9343.845348
EM: Round [356] log likelihood: -9343.844327
EM: Round [357] log likelihood: -9343.843315
EM: Round [358] log likelihood: -9343.842313
EM: Round [359] log likelihood: -9343.841320
EM: Round [360] log likelihood: -9343.840336
EM: Round [361] log likelihood: -9343.839361
EM: Round [362] log likelihood: -9343.838395
EM: Round [363] log likelihood: -9343.837438
EM: Round [364] log likelihood: -9343.836489
EM: Round [365] log likelihood: -9343.835549
EM: Round [366] log likelihood: -9343.834618
EM: Round [367] log likelihood: -9343.833695
EM: Round [368] log likelihood: -9343.832780
EM: Round [369] log likelihood: -9343.831874
EM: Round [370] log likelihood: -9343.830975
EM: Round [371] log likelihood: -9343.830085
EM: Round [372] log likelihood: -9343.829203
EM: Round [373] log likelihood: -9343.828329
EM: Round [374] log likelihood: -9343.827462
EM: Round [375] log likelihood: -9343.826603
EM: Round [376] log likelihood: -9343.825752
EM: Round [377] log likelihood: -9343.824909
EM: Round [378] log likelihood: -9343.824073
EM: Round [379] log likelihood: -9343.823245
EM: Round [380] log likelihood: -9343.822424
EM: Round [381] log likelihood: -9343.821610
EM: Round [382] log likelihood: -9343.820803
EM: Round [383] log likelihood: -9343.820004
EM: Round [384] log likelihood: -9343.819211
EM: Round [385] log likelihood: -9343.818426
EM: Round [386] log likelihood: -9343.817648
EM: Round [387] log likelihood: -9343.816876
EM: Round [388] log likelihood: -9343.816111
EM: Round [389] log likelihood: -9343.815353
EM: Round [390] log likelihood: -9343.814602
EM: Round [391] log likelihood: -9343.813857
EM: Round [392] log likelihood: -9343.813119
EM: Round [393] log likelihood: -9343.812387
EM: Round [394] log likelihood: -9343.811662
EM: Round [395] log likelihood: -9343.810942
EM: Round [396] log likelihood: -9343.810230
EM: Round [397] log likelihood: -9343.809523
EM: Round [398] log likelihood: -9343.808822
EM: Round [399] log likelihood: -9343.808128
EM: Round [400] log likelihood: -9343.807440
EM: Round [401] log likelihood: -9343.806757
EM: Round [402] log likelihood: -9343.806081
EM: Round [403] log likelihood: -9343.805410
EM: Round [404] log likelihood: -9343.804745
EM: Round [405] log likelihood: -9343.804086
EM: Round [406] log likelihood: -9343.803432
EM: Round [407] log likelihood: -9343.802785
EM: Round [408] log likelihood: -9343.802142
EM: Round [409] log likelihood: -9343.801505
EM: Round [410] log likelihood: -9343.800874
EM: Round [411] log likelihood: -9343.800248
EM: Round [412] log likelihood: -9343.799628
EM: Round [413] log likelihood: -9343.799012
EM: Round [414] log likelihood: -9343.798402
EM: Round [415] log likelihood: -9343.797797
EM: Round [416] log likelihood: -9343.797198
EM: Round [417] log likelihood: -9343.796603
EM: Round [418] log likelihood: -9343.796013
EM: Round [419] log likelihood: -9343.795429
EM: Round [420] log likelihood: -9343.794849
EM: Round [421] log likelihood: -9343.794274
EM: Round [422] log likelihood: -9343.793704
EM: Round [423] log likelihood: -9343.793139
EM: Round [424] log likelihood: -9343.792579
EM: Round [425] log likelihood: -9343.792023
EM: Round [426] log likelihood: -9343.791472
EM: Round [427] log likelihood: -9343.790926
EM: Round [428] log likelihood: -9343.790384
EM: Round [429] log likelihood: -9343.789847
EM: Round [430] log likelihood: -9343.789314
EM: Round [431] log likelihood: -9343.788786
EM: Round [432] log likelihood: -9343.788262
EM: Round [433] log likelihood: -9343.787743
EM: Round [434] log likelihood: -9343.787227
EM: Round [435] log likelihood: -9343.786716
EM: Round [436] log likelihood: -9343.786210
EM: Round [437] log likelihood: -9343.785707
EM: Round [438] log likelihood: -9343.785209
EM: Round [439] log likelihood: -9343.784715
EM: Round [440] log likelihood: -9343.784225
EM: Round [441] log likelihood: -9343.783739
EM: Round [442] log likelihood: -9343.783257
EM: Round [443] log likelihood: -9343.782779
EM: Round [444] log likelihood: -9343.782304
EM: Round [445] log likelihood: -9343.781834
EM: Round [446] log likelihood: -9343.781368
EM: Round [447] log likelihood: -9343.780905
EM: Round [448] log likelihood: -9343.780446
EM: Round [449] log likelihood: -9343.779991
EM: Round [450] log likelihood: -9343.779540
EM: Round [451] log likelihood: -9343.779092
EM: Round [452] log likelihood: -9343.778648
EM: Round [453] log likelihood: -9343.778208
EM: Round [454] log likelihood: -9343.777771
EM: Round [455] log likelihood: -9343.777338
EM: Round [456] log likelihood: -9343.776908
EM: Round [457] log likelihood: -9343.776482
EM: Round [458] log likelihood: -9343.776059
EM: Round [459] log likelihood: -9343.775640
EM: Round [460] log likelihood: -9343.775224
EM: Round [461] log likelihood: -9343.774812
EM: Round [462] log likelihood: -9343.774402
EM: Round [463] log likelihood: -9343.773996
EM: Round [464] log likelihood: -9343.773594
EM: Round [465] log likelihood: -9343.773194
EM: Round [466] log likelihood: -9343.772798
EM: Round [467] log likelihood: -9343.772405
EM: Round [468] log likelihood: -9343.772015
EM: Round [469] log likelihood: -9343.771628
EM: Round [470] log likelihood: -9343.771244
EM: Round [471] log likelihood: -9343.770864
EM: Round [472] log likelihood: -9343.770486
EM: Round [473] log likelihood: -9343.770111
EM: Round [474] log likelihood: -9343.769740
EM: Round [475] log likelihood: -9343.769371
EM: Round [476] log likelihood: -9343.769005
EM: Round [477] log likelihood: -9343.768643
EM: Round [478] log likelihood: -9343.768283
EM: Round [479] log likelihood: -9343.767925
EM: Round [480] log likelihood: -9343.767571
EM: Round [481] log likelihood: -9343.767220
EM: Round [482] log likelihood: -9343.766871
EM: Round [483] log likelihood: -9343.766525
EM: Round [484] log likelihood: -9343.766182
EM: Round [485] log likelihood: -9343.765841
EM: Round [486] log likelihood: -9343.765503
EM: Round [487] log likelihood: -9343.765168
EM: Round [488] log likelihood: -9343.764836
EM: Round [489] log likelihood: -9343.764506
EM: Round [490] log likelihood: -9343.764178
EM: Round [491] log likelihood: -9343.763854
EM: Round [492] log likelihood: -9343.763531
EM: Round [493] log likelihood: -9343.763211
EM: Round [494] log likelihood: -9343.762894
EM: Round [495] log likelihood: -9343.762579
EM: Round [496] log likelihood: -9343.762267
EM: Round [497] log likelihood: -9343.761957
EM: Round [498] log likelihood: -9343.761650
EM: Round [499] log likelihood: -9343.761345
EM: Round [500] log likelihood: -9343.761042
EM: Round [501] log likelihood: -9343.760741
EM: Round [502] log likelihood: -9343.760443
EM: Round [503] log likelihood: -9343.760148
EM: Round [504] log likelihood: -9343.759854
EM: Round [505] log likelihood: -9343.759563
EM: Round [506] log likelihood: -9343.759274
EM: Round [507] log likelihood: -9343.758987
EM: Round [508] log likelihood: -9343.758703
EM: Round [509] log likelihood: -9343.758420
EM: Round [510] log likelihood: -9343.758140
EM: Round [511] log likelihood: -9343.757862
EM: Round [512] log likelihood: -9343.757586
EM: Round [513] log likelihood: -9343.757312
EM: Round [514] log likelihood: -9343.757041
EM: Round [515] log likelihood: -9343.756771
EM: Round [516] log likelihood: -9343.756504
EM: Round [517] log likelihood: -9343.756238
EM: Round [518] log likelihood: -9343.755975
EM: Round [519] log likelihood: -9343.755713
EM: Round [520] log likelihood: -9343.755454
EM: Round [521] log likelihood: -9343.755196
EM: Round [522] log likelihood: -9343.754940
EM: Round [523] log likelihood: -9343.754687
EM: Round [524] log likelihood: -9343.754435
EM: Round [525] log likelihood: -9343.754185
EM: Round [526] log likelihood: -9343.753937
EM: Round [527] log likelihood: -9343.753691
EM: Round [528] log likelihood: -9343.753447
EM: Round [529] log likelihood: -9343.753205
EM: Round [530] log likelihood: -9343.752964
EM: Round [531] log likelihood: -9343.752726
EM: Round [532] log likelihood: -9343.752489
EM: Round [533] log likelihood: -9343.752254
EM: Round [534] log likelihood: -9343.752020
EM: Round [535] log likelihood: -9343.751789
EM: Round [536] log likelihood: -9343.751559
EM: Round [537] log likelihood: -9343.751331
EM: Round [538] log likelihood: -9343.751105
EM: Round [539] log likelihood: -9343.750880
EM: Round [540] log likelihood: -9343.750657
EM: Round [541] log likelihood: -9343.750435
EM: Round [542] log likelihood: -9343.750216
EM: Round [543] log likelihood: -9343.749998
EM: Round [544] log likelihood: -9343.749781
EM: Round [545] log likelihood: -9343.749566
EM: Round [546] log likelihood: -9343.749353
EM: Round [547] log likelihood: -9343.749141
EM: Round [548] log likelihood: -9343.748931
EM: Round [549] log likelihood: -9343.748723
EM: Round [550] log likelihood: -9343.748516
EM: Round [551] log likelihood: -9343.748310
EM: Round [552] log likelihood: -9343.748107
EM: Round [553] log likelihood: -9343.747904
EM: Round [554] log likelihood: -9343.747703
EM: Round [555] log likelihood: -9343.747504
EM: Round [556] log likelihood: -9343.747306
EM: Round [557] log likelihood: -9343.747109
EM: Round [558] log likelihood: -9343.746914
EM: Round [559] log likelihood: -9343.746721
EM: Round [560] log likelihood: -9343.746528
EM: Round [561] log likelihood: -9343.746338
EM: Round [562] log likelihood: -9343.746148
EM: Round [563] log likelihood: -9343.745960
EM: Round [564] log likelihood: -9343.745774
EM: Round [565] log likelihood: -9343.745588
EM: Round [566] log likelihood: -9343.745405
EM: Round [567] log likelihood: -9343.745222
EM: Round [568] log likelihood: -9343.745041
EM: Round [569] log likelihood: -9343.744861
EM: Round [570] log likelihood: -9343.744682
EM: Round [571] log likelihood: -9343.744505
EM: Round [572] log likelihood: -9343.744329
EM: Round [573] log likelihood: -9343.744154
EM: Round [574] log likelihood: -9343.743981
EM: Round [575] log likelihood: -9343.743809
EM: Round [576] log likelihood: -9343.743638
EM: Round [577] log likelihood: -9343.743468
EM: Round [578] log likelihood: -9343.743300
EM: Round [579] log likelihood: -9343.743133
EM: Round [580] log likelihood: -9343.742967
EM: Round [581] log likelihood: -9343.742802
EM: Round [582] log likelihood: -9343.742638
EM: Round [583] log likelihood: -9343.742476
EM: Round [584] log likelihood: -9343.742315
EM: Round [585] log likelihood: -9343.742155
EM: Round [586] log likelihood: -9343.741996
EM: Round [587] log likelihood: -9343.741838
EM: Round [588] log likelihood: -9343.741681
EM: Round [589] log likelihood: -9343.741526
EM: Round [590] log likelihood: -9343.741371
EM: Round [591] log likelihood: -9343.741218
EM: Round [592] log likelihood: -9343.741066
EM: Round [593] log likelihood: -9343.740915
EM: Round [594] log likelihood: -9343.740765
EM: Round [595] log likelihood: -9343.740616
EM: Round [596] log likelihood: -9343.740468
EM: Round [597] log likelihood: -9343.740321
EM: Round [598] log likelihood: -9343.740175
EM: Round [599] log likelihood: -9343.740031
EM: Round [600] log likelihood: -9343.739887
EM: Round [601] log likelihood: -9343.739744
EM: Round [602] log likelihood: -9343.739603
EM: Round [603] log likelihood: -9343.739462
EM: Round [604] log likelihood: -9343.739322
EM: Round [605] log likelihood: -9343.739184
EM: Round [606] log likelihood: -9343.739046
EM: Round [607] log likelihood: -9343.738909
EM: Round [608] log likelihood: -9343.738774
EM: Round [609] log likelihood: -9343.738639
EM: Round [610] log likelihood: -9343.738505
EM: Round [611] log likelihood: -9343.738372
EM: Round [612] log likelihood: -9343.738240
EM: Round [613] log likelihood: -9343.738110
EM: Round [614] log likelihood: -9343.737980
EM: Round [615] log likelihood: -9343.737850
EM: Round [616] log likelihood: -9343.737722
EM: Round [617] log likelihood: -9343.737595
EM: Round [618] log likelihood: -9343.737469
EM: Round [619] log likelihood: -9343.737343
EM: Round [620] log likelihood: -9343.737218
EM: Round [621] log likelihood: -9343.737095
EM: Round [622] log likelihood: -9343.736972
EM: Round [623] log likelihood: -9343.736850
EM: Round [624] log likelihood: -9343.736729
EM: Round [625] log likelihood: -9343.736608
EM: Round [626] log likelihood: -9343.736489
EM: Round [627] log likelihood: -9343.736370
EM: Round [628] log likelihood: -9343.736253
EM: Round [629] log likelihood: -9343.736136
EM: Round [630] log likelihood: -9343.736020
EM: Round [631] log likelihood: -9343.735904
EM: Round [632] log likelihood: -9343.735790
EM: Round [633] log likelihood: -9343.735676
EM: Round [634] log likelihood: -9343.735563
EM: Round [635] log likelihood: -9343.735451
EM: Round [636] log likelihood: -9343.735340
EM: Round [637] log likelihood: -9343.735229
EM: Round [638] log likelihood: -9343.735119
EM: Round [639] log likelihood: -9343.735010
EM: Round [640] log likelihood: -9343.734902
EM: Round [641] log likelihood: -9343.734795
EM: Round [642] log likelihood: -9343.734688
EM: Round [643] log likelihood: -9343.734582
EM: Round [644] log likelihood: -9343.734477
EM: Round [645] log likelihood: -9343.734372
EM: Round [646] log likelihood: -9343.734268
EM: Round [647] log likelihood: -9343.734165
EM: Round [648] log likelihood: -9343.734063
EM: Round [649] log likelihood: -9343.733961
EM: Round [650] log likelihood: -9343.733860
EM: Round [651] log likelihood: -9343.733760
EM: Round [652] log likelihood: -9343.733660
EM: Stopping iterations at round 652 due to insufficient improvement in likelihood.
[bam_sort_core] merging from 0 files and 8 in-memory blocks...
-extracting read coordinates from /tmp/nxf.qK299E5g7p/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.consolidated.bam into /tmp/nxf.qK299E5g7p/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.consolidated.bam.read_coords
CMD: touch /tmp/nxf.qK299E5g7p/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.consolidated.bam.read_coords.ok
CMD: /usr/bin/sort --parallel=1 -S10G -T . -k1,1 -k2,2 -k4,4n /tmp/nxf.qK299E5g7p/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.consolidated.bam.read_coords > /tmp/nxf.qK299E5g7p/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.consolidated.bam.read_coords.sort_by_readname
CMD: /usr/bin/sort --parallel=1 -S10G -T . -k1,1 -k3,3n /tmp/nxf.qK299E5g7p/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.consolidated.bam.frag_coords > /tmp/nxf.qK299E5g7p/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.consolidated.bam.frag_coords.coord_sorted
CMD: /usr/local/src/STAR-Fusion/FusionInspector/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.qK299E5g7p/fi_workdir/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo --genome_lib_dir ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionInspector/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.qK299E5g7p/fi_workdir/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo.post_blast_filter --genome_lib_dir ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 50
CMD: cp /tmp/nxf.qK299E5g7p/fi_workdir/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.fusion_preds.coalesced.summary.EMadj.min_frag_thresh.wSpliceInfo.post_blast_filter.post_promisc_filter /tmp/nxf.qK299E5g7p/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.post_blast_and_promiscuity_filter
-done, see /tmp/nxf.qK299E5g7p/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.post_blast_and_promiscuity_filter.annot_filter.pass
EM: Starting log likelihood: -6830.284558
EM: Round [1] log likelihood: -6830.280231
EM: Round [2] log likelihood: -6830.280042
EM: Round [3] log likelihood: -6830.280034
EM: Stopping iterations at round 3 due to insufficient improvement in likelihood.
-total frags in /tmp/nxf.qK299E5g7p/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1_1.fastp.fastq.gz: 267915314
Warning - not locating file: /tmp/nxf.qK299E5g7p/1173_NMN_T1_RNA_SLD_01_A23T55JLT4_1.gmap_trinity_GG.fusions.gff3.bed
WARNING, no entry stored in dbm for [ENSG00000286472.1]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000215559.8]
WARNING, no entry stored in dbm for [ENSG00000245248.8]
WARNING, no entry stored in dbm for [ENSG00000245248.8]
ls: cannot access 'IGV_inputs': No such file or directory