AIH curated blacklist: matched 10 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 244
Pass (FILTER=PASS): 26 (10.7%)
Fail (FILTER=FAIL): 218 (89.3%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 10
All 10 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 65
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 35
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 25
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 17
confidence_below_min(low<high): 14
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(medium<high);aih_curated_blacklist: 6
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 3
Breakdown by confidence:
high: 26 pass, 6 fail (total: 32)
low: 0 pass, 88 fail (total: 88)
medium: 0 pass, 124 fail (total: 124)
Arriba filter: 244 rows -> 26 PASS; wrote 1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filtered.tsv and 1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: 1173_M5U_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filter_summary.txt