-ctat genome lib [/tmp/nxf.cUFto5FZ89/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.cUFto5FZ89/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary -sample contains 294646584 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.cUFto5FZ89/ctat_genome_lib_build_dir -J /tmp/nxf.cUFto5FZ89/1173_CRL_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction -O /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.cUFto5FZ89/1173_CRL_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction -building interval tree based on /tmp/nxf.cUFto5FZ89/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=54545.45/min [20000], rate=54545.45/min [30000], rate=58064.52/min [40000], rate=57142.86/min [50000], rate=57692.31/min [60000], rate=58064.52/min [70000], rate=58333.33/min [80000], rate=59259.26/min [90000], rate=59340.66/min [100000], rate=59405.94/min [110000], rate=59459.46/min [120000], rate=58536.59/min [130000], rate=58208.96/min [140000], rate=57534.25/min [150000], rate=57324.84/min [160000], rate=57485.03/min [170000], rate=57627.12/min [180000], rate=58064.52/min [190000], rate=58163.27/min [200000], rate=58252.43/min [210000], rate=58604.65/min [220000], rate=58928.57/min [230000], rate=59227.47/min [240000], rate=59259.26/min [250000], rate=59288.54/min [260000], rate=59770.11/min [270000], rate=60223.05/min [280000], rate=60649.82/min [290000], rate=61052.63/min [300000], rate=61433.45/min [310000], rate=61794.02/min [320000], rate=62540.72/min [330000], rate=63057.32/min [340000], rate=63551.40/min [350000], rate=64220.18/min [360000], rate=64864.86/min [370000], rate=65294.12/min [380000], rate=65706.05/min [390000], rate=66288.95/min [400000], rate=64343.16/min [410000], rate=62915.60/min [420000], rate=61613.69/min [430000], rate=60421.55/min [440000], rate=59593.68/min [450000], rate=58695.65/min [460000], rate=57861.64/min [470000], rate=57200.81/min [480000], rate=56470.59/min [490000], rate=56000.00/min [500000], rate=55248.62/min [510000], rate=54351.69/min [520000], rate=53516.30/min [530000], rate=52823.92/min [540000], rate=52258.06/min [550000], rate=51724.14/min [560000], rate=51376.15/min [570000], rate=50741.84/min [580000], rate=50216.45/min [590000], rate=49579.83/min [600000], rate=49046.32/min [610000], rate=48735.02/min [620000], rate=48437.50/min [630000], rate=48214.29/min [640000], rate=48060.08/min [650000], rate=47852.76/min [660000], rate=47596.15/min [670000], rate=47461.63/min [680000], rate=47607.93/min [690000], rate=47916.67/min [700000], rate=47945.21/min [710000], rate=47811.45/min [720000], rate=47682.12/min [730000], rate=47505.42/min [740000], rate=47385.27/min [750000], rate=47268.91/min [760000], rate=47204.97/min [770000], rate=47287.62/min [780000], rate=47320.53/min [790000], rate=47352.65/min [800000], rate=47430.83/min [810000], rate=47460.94/min [820000], rate=47536.23/min [830000], rate=47609.94/min [840000], rate=47592.07/min [850000], rate=47530.29/min [860000], rate=47339.45/min [870000], rate=47239.82/min [880000], rate=47227.19/min [890000], rate=47173.14/min [900000], rate=47244.09/min [910000], rate=47231.83/min [920000], rate=47219.85/min [930000], rate=47288.14/min [940000], rate=47275.78/min [950000], rate=47302.90/min [960000], rate=47251.85/min [970000], rate=47278.64/min [980000], rate=47304.91/min [990000], rate=47330.68/min [1000000], rate=47355.96/min [1010000], rate=47454.97/min [1020000], rate=47552.45/min [1030000], rate=47611.71/min [1040000], rate=47706.42/min [1050000], rate=47799.70/min [1060000], rate=47855.53/min [1070000], rate=47874.72/min [1080000], rate=47928.99/min [1090000], rate=47982.39/min [1100000], rate=48104.96/min [1110000], rate=48191.03/min [1120000], rate=48241.21/min [1130000], rate=48325.02/min [1140000], rate=48407.64/min [1150000], rate=48421.05/min [1160000], rate=48501.74/min [1170000], rate=48648.65/min [1180000], rate=48760.33/min [1190000], rate=48904.11/min [1200000], rate=49012.93/min [1210000], rate=49153.69/min [1220000], rate=49326.15/min [1230000], rate=49463.81/min [1240000], rate=49600.00/min [1250000], rate=49734.75/min [1260000], rate=49736.84/min [1270000], rate=49706.46/min [1280000], rate=49644.47/min [1290000], rate=49583.60/min [1300000], rate=49586.78/min [1310000], rate=49558.64/min [1320000], rate=49530.96/min [1330000], rate=49565.22/min [1340000], rate=49629.63/min [1350000], rate=49693.25/min [1360000], rate=49725.78/min [1370000], rate=49818.18/min [1380000], rate=49879.52/min [1390000], rate=49940.12/min [1400000], rate=49704.14/min [1410000], rate=49764.71/min [1420000], rate=49621.43/min [1430000], rate=49710.31/min [1440000], rate=49798.27/min [1450000], rate=49799.66/min [1460000], rate=49659.86/min [1470000], rate=49718.15/min [1480000], rate=49775.78/min [1490000], rate=49832.78/min [1500000], rate=49833.89/min [1510000], rate=49917.36/min [1520000], rate=50000.00/min [1530000], rate=50109.17/min [1540000], rate=50217.39/min [1550000], rate=50324.68/min [1560000], rate=50431.03/min [1570000], rate=50563.61/min [1580000], rate=50668.09/min [1590000], rate=50771.69/min [1600000], rate=50874.40/min [1610000], rate=51003.17/min [1620000], rate=51104.10/min [1630000], rate=51231.01/min [1640000], rate=51330.20/min [1650000], rate=51455.30/min [1660000], rate=51526.13/min [1670000], rate=51331.97/min [1680000], rate=51376.15/min [1690000], rate=51367.78/min [1700000], rate=51541.18/min [1710000], rate=51792.02/min [1720000], rate=51859.30/min [1730000], rate=52056.17/min [1740000], rate=52173.91/min [1750000], rate=52238.81/min [1760000], rate=52380.95/min [1770000], rate=52470.36/min [1780000], rate=52584.93/min [1790000], rate=52647.06/min [1800000], rate=52657.24/min [1810000], rate=52692.87/min [1820000], rate=52983.99/min [1830000], rate=53069.12/min [1840000], rate=53256.15/min [1850000], rate=53365.38/min [1860000], rate=53422.69/min [1870000], rate=53428.57/min [1880000], rate=53485.06/min [1890000], rate=53744.08/min [1900000], rate=53773.58/min [1910000], rate=53954.80/min [1920000], rate=54008.44/min [1930000], rate=54011.19/min [1940000], rate=54064.10/min [1950000], rate=54141.60/min [1960000], rate=54193.55/min [1970000], rate=54419.89/min [1980000], rate=54445.46/min [1990000], rate=54445.96/min [2000000], rate=54495.91/min [2010000], rate=54768.39/min [2020000], rate=54816.82/min [2030000], rate=54864.86/min [2040000], rate=54986.52/min [2050000], rate=55033.56/min [2060000], rate=55153.95/min [2070000], rate=55224.54/min [2080000], rate=55245.68/min [2090000], rate=55388.69/min [2100000], rate=55384.62/min [2110000], rate=55429.07/min [2120000], rate=55473.18/min [2130000], rate=55516.94/min [2140000], rate=55560.36/min [2150000], rate=55627.43/min [2160000], rate=55670.10/min [2170000], rate=55736.30/min [2180000], rate=55802.05/min [2190000], rate=55843.60/min [2200000], rate=55979.64/min [2210000], rate=56067.65/min [2220000], rate=56013.46/min [2230000], rate=56053.62/min [2240000], rate=56023.34/min [2250000], rate=55946.95/min [2260000], rate=55917.53/min [2270000], rate=55957.27/min [2280000], rate=55996.73/min [2290000], rate=56081.63/min [2300000], rate=56188.93/min [2310000], rate=56227.18/min [2320000], rate=56287.91/min [2330000], rate=56280.19/min [2340000], rate=56250.00/min [2350000], rate=56242.52/min [2360000], rate=56235.11/min [2370000], rate=56250.00/min [2380000], rate=56286.95/min [2390000], rate=56345.78/min [2400000], rate=56360.08/min [2410000], rate=56396.26/min [2420000], rate=56410.26/min [2430000], rate=56445.99/min [2440000], rate=56481.48/min [2450000], rate=56538.46/min [2460000], rate=56573.40/min [2470000], rate=56629.73/min [2480000], rate=56664.13/min [2490000], rate=56698.29/min [2500000], rate=56732.22/min [2510000], rate=56787.33/min [2520000], rate=56842.11/min [2530000], rate=56875.23/min [2540000], rate=56929.40/min [2550000], rate=56983.24/min [2560000], rate=57015.59/min [2570000], rate=57047.72/min [2580000], rate=57121.77/min [2590000], rate=57174.39/min [2600000], rate=57205.72/min [2610000], rate=57236.84/min [2620000], rate=57309.52/min [2630000], rate=57360.96/min [2640000], rate=57391.30/min [2650000], rate=57153.13/min [2660000], rate=56716.42/min [2670000], rate=56230.26/min [2680000], rate=55794.59/min [2690000], rate=55368.78/min [2700000], rate=55045.87/min [2710000], rate=54821.31/min -building interval tree based on /tmp/nxf.cUFto5FZ89/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=80000.00/min [30000], rate=81818.18/min [40000], rate=82758.62/min [50000], rate=85714.29/min [60000], rate=85714.29/min [70000], rate=87500.00/min [80000], rate=88888.89/min [90000], rate=88524.59/min [100000], rate=84507.04/min [110000], rate=80487.80/min [120000], rate=78260.87/min [130000], rate=75000.00/min [140000], rate=73684.21/min [150000], rate=69767.44/min [160000], rate=66666.67/min [170000], rate=64556.96/min [180000], rate=63905.33/min [190000], rate=64044.94/min [200000], rate=64171.12/min [210000], rate=64285.71/min [220000], rate=64390.24/min [230000], rate=64485.98/min [240000], rate=64573.99/min [250000], rate=64377.68/min [260000], rate=64462.81/min [270000], rate=64031.62/min [280000], rate=63878.33/min [290000], rate=63736.26/min [300000], rate=63829.79/min [310000], rate=64137.93/min [320000], rate=64429.53/min [330000], rate=64705.88/min [340000], rate=64968.15/min [350000], rate=65217.39/min [360000], rate=65454.55/min [370000], rate=65875.37/min [380000], rate=66086.96/min [390000], rate=66477.27/min [400000], rate=66852.37/min [410000], rate=66847.83/min [420000], rate=67021.28/min [430000], rate=67187.50/min [440000], rate=67692.31/min [450000], rate=68010.08/min [460000], rate=68656.72/min [470000], rate=69975.19/min [480000], rate=70761.67/min [490000], rate=71186.44/min [500000], rate=71599.05/min [510000], rate=72857.14/min [520000], rate=73758.87/min [530000], rate=74299.07/min [540000], rate=74826.79/min [550000], rate=75688.07/min [560000], rate=76190.48/min [570000], rate=76339.29/min [580000], rate=76821.19/min [590000], rate=77292.58/min [600000], rate=78091.11/min [610000], rate=79220.78/min [620000], rate=80519.48/min [630000], rate=81818.18/min [640000], rate=82758.62/min [650000], rate=83511.78/min [660000], rate=83720.93/min [670000], rate=84276.73/min [680000], rate=85177.45/min [690000], rate=85537.19/min [700000], rate=85889.57/min [710000], rate=86585.37/min [720000], rate=86746.99/min [730000], rate=87077.53/min [740000], rate=87747.04/min [750000], rate=88582.68/min [760000], rate=89062.50/min [770000], rate=89883.27/min [780000], rate=90522.24/min [790000], rate=91682.79/min [800000], rate=92664.09/min [810000], rate=93641.62/min [820000], rate=93893.13/min [830000], rate=93962.26/min [840000], rate=94029.85/min [850000], rate=93577.98/min [860000], rate=93309.22/min [870000], rate=93214.29/min [880000], rate=93451.33/min [890000], rate=93684.21/min [900000], rate=93913.04/min [910000], rate=94137.93/min [920000], rate=93718.17/min [930000], rate=92231.40/min [940000], rate=90967.74/min [950000], rate=89481.95/min [960000], rate=88479.26/min [970000], rate=86478.45/min [980000], rate=84726.22/min [990000], rate=83779.97/min [1000000], rate=82758.62/min [1010000], rate=81891.89/min [1020000], rate=81059.60/min [1030000], rate=80468.75/min [1040000], rate=80102.70/min [1050000], rate=79949.24/min [1060000], rate=79699.25/min [1070000], rate=79553.90/min [1080000], rate=79024.39/min [1090000], rate=78890.23/min [1100000], rate=78665.08/min [1110000], rate=78537.74/min [1120000], rate=78504.67/min [1130000], rate=78563.15/min [1140000], rate=78530.42/min [1150000], rate=78498.29/min [1160000], rate=78466.74/min [1170000], rate=78523.49/min [1180000], rate=78754.17/min [1190000], rate=78982.30/min [1200000], rate=79034.03/min [1210000], rate=79084.97/min [1220000], rate=79135.14/min [1230000], rate=79269.60/min [1240000], rate=79317.70/min [1250000], rate=79197.47/min [1260000], rate=78586.28/min [1270000], rate=77993.86/min [1280000], rate=77497.48/min [1290000], rate=77014.93/min [1300000], rate=76470.59/min [1310000], rate=76015.47/min [1320000], rate=75862.07/min [1330000], rate=75425.33/min [1340000], rate=75070.03/min [1350000], rate=74517.02/min [1360000], rate=73980.05/min [1370000], rate=73524.15/min [1380000], rate=73015.87/min [1390000], rate=72648.08/min [1400000], rate=72351.42/min [1410000], rate=72061.33/min [1420000], rate=71777.59/min [1430000], rate=71500.00/min [1440000], rate=71346.00/min [1450000], rate=71136.55/min [1460000], rate=70816.49/min [1470000], rate=70673.08/min [1480000], rate=70476.19/min [1490000], rate=70283.02/min [1500000], rate=69875.78/min [1510000], rate=69585.25/min [1520000], rate=69300.91/min [1530000], rate=69074.49/min [1540000], rate=69006.72/min [1550000], rate=68786.98/min [1560000], rate=68471.10/min [1570000], rate=68112.80/min [1580000], rate=67859.70/min [1590000], rate=67515.92/min [1600000], rate=67368.42/min [1610000], rate=67270.19/min [1620000], rate=67034.48/min [1630000], rate=66757.68/min [1640000], rate=66486.49/min [1650000], rate=66265.06/min [1660000], rate=66091.57/min [1670000], rate=65921.05/min [1680000], rate=65796.34/min [1690000], rate=65673.58/min [1700000], rate=65721.65/min [1710000], rate=65559.11/min [1720000], rate=65357.82/min [1730000], rate=65201.01/min [1740000], rate=65087.28/min [1750000], rate=65136.48/min [1760000], rate=64944.65/min [1770000], rate=64874.77/min [1780000], rate=64766.53/min [1790000], rate=64620.94/min [1800000], rate=64439.14/min [1810000], rate=64298.40/min [1820000], rate=64197.53/min [1830000], rate=63837.21/min [1840000], rate=63741.34/min [1850000], rate=63501.14/min [1860000], rate=63337.12/min [1870000], rate=63246.90/min [1880000], rate=63228.70/min [1890000], rate=63245.96/min [1900000], rate=63263.04/min [1910000], rate=62967.03/min [1920000], rate=62916.44/min [1930000], rate=62866.45/min [1940000], rate=62884.93/min [1950000], rate=62937.06/min [1960000], rate=62988.75/min [1970000], rate=63006.40/min [1980000], rate=63057.32/min [1990000], rate=63141.20/min [2000000], rate=63224.45/min [2010000], rate=63307.09/min [2020000], rate=63355.99/min [2030000], rate=63437.50/min [2040000], rate=63518.42/min [2050000], rate=63304.17/min [2060000], rate=62424.24/min [2070000], rate=61760.32/min [2080000], rate=61176.47/min [2090000], rate=60608.99/min [2100000], rate=59971.44/min [2110000], rate=59380.86/min [2120000], rate=58943.47/min [2130000], rate=58623.85/min [2140000], rate=58284.16/min [2150000], rate=57821.60/min [2160000], rate=57497.78/min [2170000], rate=57180.50/min [2180000], rate=56795.48/min [2190000], rate=56394.85/min [2200000], rate=56122.45/min [2210000], rate=55925.77/min [2220000], rate=55662.35/min [2230000], rate=55334.99/min [2240000], rate=55127.15/min [2250000], rate=54945.05/min [2260000], rate=54765.75/min [2270000], rate=54632.97/min [2280000], rate=54458.60/min [2290000], rate=54308.30/min [2300000], rate=54160.13/min [2310000], rate=54056.16/min [2320000], rate=53890.82/min [2330000], rate=53769.23/min [2340000], rate=53587.79/min [2350000], rate=53449.58/min [2360000], rate=53333.33/min [2370000], rate=53238.49/min [2380000], rate=53105.24/min [2390000], rate=52993.35/min [2400000], rate=52980.13/min [2410000], rate=52986.44/min [2420000], rate=52876.91/min [2430000], rate=52806.95/min [2440000], rate=52794.81/min [2450000], rate=52820.70/min [2460000], rate=52789.70/min [2470000], rate=52721.45/min [2480000], rate=52691.22/min [2490000], rate=52642.71/min [2500000], rate=52650.05/min [2510000], rate=52620.55/min [2520000], rate=52573.02/min [2530000], rate=52525.95/min [2540000], rate=52461.27/min [2550000], rate=52379.32/min [2560000], rate=52333.90/min [2570000], rate=52324.40/min [2580000], rate=52297.30/min [2590000], rate=52305.62/min [2600000], rate=52331.43/min [2610000], rate=52339.57/min [2620000], rate=52365.09/min [2630000], rate=52390.44/min [2640000], rate=52450.33/min [2650000], rate=52492.57/min [2660000], rate=52534.56/min [2670000], rate=52559.06/min [2680000], rate=52600.59/min [2690000], rate=52641.88/min [2700000], rate=52700.07/min [2710000], rate=52757.95/min -building interval tree based on /tmp/nxf.cUFto5FZ89/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=50000.00/min [20000], rate=50000.00/min [30000], rate=51428.57/min [40000], rate=53333.33/min [50000], rate=53571.43/min [60000], rate=54545.45/min [70000], rate=55263.16/min [80000], rate=56470.59/min [90000], 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rate=34857.57/min [1560000], rate=34977.58/min [1570000], rate=35109.95/min [1580000], rate=35202.38/min [1590000], rate=35215.95/min [1600000], rate=35216.43/min [1610000], rate=35216.92/min [1620000], rate=35230.16/min [1630000], rate=35243.24/min [1640000], rate=35268.82/min [1650000], rate=35294.12/min [1660000], rate=35331.68/min [1670000], rate=35368.87/min [1680000], rate=35418.13/min [1690000], rate=35504.20/min [1700000], rate=35564.85/min [1710000], rate=35649.76/min [1720000], rate=35721.70/min [1730000], rate=35780.77/min [1740000], rate=35839.34/min [1750000], rate=35909.71/min [1760000], rate=35979.56/min [1770000], rate=36036.65/min [1780000], rate=36093.27/min [1790000], rate=36185.98/min [1800000], rate=36253.78/min [1810000], rate=36345.38/min [1820000], rate=36436.44/min [1830000], rate=36514.80/min [1840000], rate=36592.64/min [1850000], rate=36669.97/min [1860000], rate=36758.89/min [1870000], rate=36835.19/min [1880000], rate=36923.08/min [1890000], rate=37010.44/min [1900000], rate=37097.30/min [1910000], rate=37195.72/min [1920000], rate=37293.62/min [1930000], rate=37378.95/min [1940000], rate=37475.85/min [1950000], rate=37560.19/min [1960000], rate=37656.10/min [1970000], rate=37763.58/min [1980000], rate=37858.51/min [1990000], rate=37965.02/min [2000000], rate=38058.99/min [2010000], rate=38176.64/min [2020000], rate=38269.66/min [2030000], rate=38205.77/min [2040000], rate=38047.87/min [2050000], rate=37857.80/min [2060000], rate=37648.49/min [2070000], rate=37568.06/min [2080000], rate=37398.86/min [2090000], rate=37254.90/min [2100000], rate=37157.18/min [2110000], rate=37028.37/min [2120000], rate=36976.74/min [2130000], rate=36915.08/min [2140000], rate=36833.05/min [2150000], rate=36783.58/min [2160000], rate=36765.96/min [2170000], rate=36758.89/min [2180000], rate=36751.90/min [2190000], rate=36734.69/min [2200000], rate=36707.45/min [2210000], rate=36710.96/min [2220000], rate=36765.11/min [2230000], rate=36818.93/min [2240000], rate=36832.01/min [2250000], rate=36844.98/min [2260000], rate=36867.86/min [2270000], rate=36920.57/min [2280000], rate=36972.97/min [2290000], rate=37015.09/min [2300000], rate=37027.10/min [2310000], rate=37019.23/min [2320000], rate=37040.98/min [2330000], rate=37072.39/min [2340000], rate=37103.59/min [2350000], rate=37144.36/min [2360000], rate=37184.87/min [2370000], rate=37225.13/min [2380000], rate=37255.41/min [2390000], rate=37295.19/min [2400000], rate=37334.72/min [2410000], rate=37374.00/min [2420000], rate=37413.04/min [2430000], rate=37461.46/min [2440000], rate=37509.61/min [2450000], rate=37557.49/min [2460000], rate=37605.10/min [2470000], rate=37671.58/min [2480000], rate=37728.19/min [2490000], rate=37794.08/min [2500000], rate=37859.67/min [2510000], rate=37934.51/min [2520000], rate=37999.50/min [2530000], rate=38083.29/min [2540000], rate=38157.24/min [2550000], rate=38240.44/min [2560000], rate=38313.79/min [2570000], rate=38396.41/min [2580000], rate=38469.18/min [2590000], rate=38551.23/min [2600000], rate=38594.76/min [2610000], rate=38542.95/min [2620000], rate=38501.10/min [2630000], rate=38440.93/min [2640000], rate=38390.69/min [2650000], rate=38340.97/min [2660000], rate=38328.53/min [2670000], rate=38307.03/min [2680000], rate=38303.95/min [2690000], rate=38319.09/min [2700000], rate=38343.20/min [2710000], rate=38349.06/min [2720000], rate=38354.88/min [2730000], rate=38360.66/min [2740000], rate=38375.35/min [2750000], rate=38389.95/min [2760000], rate=38404.45/min [2770000], rate=38436.63/min [2780000], rate=38450.90/min [2790000], rate=38473.91/min [2800000], rate=38487.97/min [2810000], rate=38501.94/min [2820000], rate=38542.14/min [2830000], rate=38573.38/min [2840000], rate=38595.70/min [2850000], rate=38626.61/min [2860000], rate=38657.36/min [2870000], rate=38687.94/min [2880000], rate=38727.03/min [2890000], rate=38757.26/min [2900000], rate=38787.34/min [2910000], rate=38817.25/min [2920000], rate=38838.40/min [2930000], rate=38868.01/min [2940000], rate=38906.04/min [2950000], rate=38943.89/min [2960000], rate=38981.56/min [2970000], rate=39019.05/min [2980000], rate=39056.36/min [2990000], rate=39102.01/min [3000000], rate=39138.94/min [3010000], rate=39192.71/min [3020000], rate=39237.77/min [3030000], rate=39282.63/min [3040000], rate=39335.78/min [3050000], rate=39388.72/min [3060000], rate=39441.46/min [3070000], rate=39494.00/min [3080000], rate=39537.87/min [3090000], rate=39590.01/min [3100000], rate=39650.39/min [3110000], rate=39676.80/min [3120000], rate=39719.92/min [3130000], rate=39771.28/min [3140000], rate=39830.87/min [3150000], rate=39907.09/min [3160000], rate=39966.27/min [3170000], rate=40025.25/min [3180000], rate=40084.03/min [3190000], rate=40151.04/min [3200000], rate=40217.85/min [3210000], rate=40276.04/min [3220000], rate=40342.45/min [3230000], rate=40408.67/min [3240000], rate=40474.70/min [3250000], rate=40548.97/min [3260000], rate=40614.62/min [3270000], rate=40696.95/min [3280000], rate=40762.22/min [3290000], rate=40835.75/min [3300000], rate=40909.09/min [3310000], rate=40973.80/min [3320000], rate=41021.42/min [3330000], rate=41077.30/min [3340000], rate=41141.45/min [3350000], rate=41196.97/min [3360000], rate=41260.74/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.cUFto5FZ89/ctat_genome_lib_build_dir --filt_file /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 12000000.00 reads per min processed... 18000000.00 reads per min processed... 12000000.00 reads per min processed... 7500000.00 reads per min processed... 6000000.00 reads per min processed... 5250000.00 reads per min processed... 4800000.00 reads per min processed... 4500000.00 reads per min processed... 4285714.29 reads per min processed... 4400000.00 reads per min processed... 4235294.12 reads per min processed... 4105263.16 reads per min processed... 4000000.00 reads per min processed... 4090909.09 reads per min processed... 4000000.00 reads per min processed... 3923076.92 reads per min processed... 3857142.86 reads per min processed... 3931034.48 reads per min processed... 3870967.74 reads per min processed... 3818181.82 reads per min processed... 3882352.94 reads per min processed... 3833333.33 reads per min processed... 3789473.68 reads per min processed... 3750000.00 reads per min processed... 3714285.71 reads per min processed... 3600000.00 reads per min processed... 3574468.09 reads per min processed... 3551020.41 reads per min processed... 3529411.76 reads per min processed... 3509433.96 reads per min processed... 3490909.09 reads per min processed... 3473684.21 reads per min processed... 3517241.38 reads per min processed... 3500000.00 reads per min processed... 3540983.61 reads per min processed... 3523809.52 reads per min processed... 3507692.31 reads per min processed... 3492537.31 reads per min processed... 3529411.76 reads per min processed... 3514285.71 reads per min processed... 3549295.77 reads per min processed... 3534246.58 reads per min processed... 3567567.57 reads per min processed... 3552631.58 reads per min processed... 3538461.54 reads per min processed... 3569620.25 reads per min processed... 3555555.56 reads per min processed... 3542168.67 reads per min processed... 3571428.57 reads per min processed... 3600000.00 reads per min processed... 3586206.90 reads per min processed... 3613636.36 reads per min processed... 3600000.00 reads per min processed... 3626373.63 reads per min processed... 3612903.23 reads per min processed... 3638297.87 reads per min processed... 3663157.89 reads per min processed... 3726315.79 reads per min processed... 3750000.00 reads per min processed... 3773195.88 reads per min processed... 3757575.76 reads per min processed... 3742574.26 reads per min processed... 3764705.88 reads per min processed... 3750000.00 reads per min processed... 3771428.57 reads per min processed... 3757009.35 reads per min processed... 3777777.78 reads per min processed... 3763636.36 reads per min processed... 3783783.78 reads per min processed... 3769911.50 reads per min processed... 3789473.68 reads per min processed... 3775862.07 reads per min processed... 3794871.79 reads per min processed... 3781512.61 reads per min processed... 3768595.04 reads per min processed... 3786885.25 reads per min processed... 3774193.55 reads per min processed... 3792000.00 reads per min processed... 3779527.56 reads per min processed... 3796875.00 reads per min processed... 3784615.38 reads per min processed... 3801526.72 reads per min processed... 3789473.68 reads per min processed... 3805970.15 reads per min processed... 3794117.65 reads per min processed... 3810218.98 reads per min processed... 3798561.15 reads per min processed... 3787234.04 reads per min processed... 3802816.90 reads per min processed... 3791666.67 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.cUFto5FZ89/1173_CRL_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.cUFto5FZ89/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -4359819.412948 EM: Round [1] log likelihood: -4359169.920016 EM: Round [2] log likelihood: -4358968.298144 EM: Round [3] log likelihood: -4358877.887221 EM: Round [4] log likelihood: -4358830.214801 EM: Round [5] log likelihood: -4358802.630804 EM: Round [6] log likelihood: -4358785.540871 EM: Round [7] log likelihood: -4358774.314167 EM: Round [8] log likelihood: -4358766.546905 EM: Round [9] log likelihood: -4358760.925766 EM: Round [10] log likelihood: -4358756.700152 EM: Round [11] log likelihood: -4358753.422046 EM: Round [12] log likelihood: -4358750.812523 EM: Round [13] log likelihood: -4358748.690836 EM: Round [14] log likelihood: -4358746.935434 EM: Round [15] log likelihood: -4358745.461804 EM: Round [16] log likelihood: -4358744.209420 EM: Round [17] log likelihood: -4358743.133811 EM: Round [18] log likelihood: -4358742.201568 EM: Round [19] log likelihood: -4358741.387100 EM: Round [20] log likelihood: -4358740.670485 EM: Round [21] log likelihood: -4358740.035977 EM: Round [22] log likelihood: -4358739.470978 EM: Round [23] log likelihood: -4358738.965291 EM: Round [24] log likelihood: -4358738.510581 EM: Round [25] log likelihood: -4358738.099969 EM: Round [26] log likelihood: -4358737.727735 EM: Round [27] log likelihood: -4358737.389084 EM: Round [28] log likelihood: -4358737.079970 EM: Round [29] log likelihood: -4358736.796957 EM: Round [30] log likelihood: -4358736.537110 EM: Round [31] log likelihood: -4358736.297906 EM: Round [32] log likelihood: -4358736.077170 EM: Round [33] log likelihood: -4358735.873012 EM: Round [34] log likelihood: -4358735.683786 EM: Round [35] log likelihood: -4358735.508053 EM: Round [36] log likelihood: -4358735.344545 EM: Round [37] log likelihood: -4358735.192146 EM: Round [38] log likelihood: -4358735.049868 EM: Round [39] log likelihood: -4358734.916832 EM: Round [40] log likelihood: -4358734.792255 EM: Round [41] log likelihood: -4358734.675437 EM: Round [42] log likelihood: -4358734.565751 EM: Round [43] log likelihood: -4358734.462632 EM: Round [44] log likelihood: -4358734.365573 EM: Round [45] log likelihood: -4358734.274112 EM: Round [46] log likelihood: -4358734.187834 EM: Round [47] log likelihood: -4358734.106360 EM: Round [48] log likelihood: -4358734.029348 EM: Round [49] log likelihood: -4358733.956482 EM: Round [50] log likelihood: -4358733.887477 EM: Round [51] log likelihood: -4358733.822070 EM: Round [52] log likelihood: -4358733.760022 EM: Round [53] log likelihood: -4358733.701111 EM: Round [54] log likelihood: -4358733.645136 EM: Round [55] log likelihood: -4358733.591908 EM: Round [56] log likelihood: -4358733.541256 EM: Round [57] log likelihood: -4358733.493021 EM: Round [58] log likelihood: -4358733.447055 EM: Round [59] log likelihood: -4358733.403223 EM: Round [60] log likelihood: -4358733.361398 EM: Round [61] log likelihood: -4358733.321463 EM: Round [62] log likelihood: -4358733.283310 EM: Round [63] log likelihood: -4358733.246837 EM: Round [64] log likelihood: -4358733.211949 EM: Round [65] log likelihood: -4358733.178561 EM: Round [66] log likelihood: -4358733.146589 EM: Round [67] log likelihood: -4358733.115957 EM: Round [68] log likelihood: -4358733.086594 EM: Round [69] log likelihood: -4358733.058434 EM: Round [70] log likelihood: -4358733.031413 EM: Round [71] log likelihood: -4358733.005474 EM: Round [72] log likelihood: -4358732.980561 EM: Round [73] log likelihood: -4358732.956624 EM: Round [74] log likelihood: -4358732.933613 EM: Round [75] log likelihood: -4358732.911485 EM: Round [76] log likelihood: -4358732.890196 EM: Round [77] log likelihood: -4358732.869706 EM: Round [78] log likelihood: -4358732.849977 EM: Round [79] log likelihood: -4358732.830975 EM: Round [80] log likelihood: -4358732.812665 EM: Round [81] log likelihood: -4358732.795016 EM: Round [82] log likelihood: -4358732.777998 EM: Round [83] log likelihood: -4358732.761583 EM: Round [84] log likelihood: -4358732.745745 EM: Round [85] log likelihood: -4358732.730458 EM: Round [86] log likelihood: -4358732.715699 EM: Round [87] log likelihood: -4358732.701445 EM: Round [88] log likelihood: -4358732.687674 EM: Round [89] log likelihood: -4358732.674367 EM: Round [90] log likelihood: -4358732.661505 EM: Round [91] log likelihood: -4358732.649069 EM: Round [92] log likelihood: -4358732.637041 EM: Round [93] log likelihood: -4358732.625407 EM: Round [94] log likelihood: -4358732.614149 EM: Round [95] log likelihood: -4358732.603254 EM: Round [96] log likelihood: -4358732.592706 EM: Round [97] log likelihood: -4358732.582494 EM: Round [98] log likelihood: -4358732.572603 EM: Round [99] log likelihood: -4358732.563022 EM: Round [100] log likelihood: -4358732.553739 EM: Round [101] log likelihood: -4358732.544743 EM: Round [102] log likelihood: -4358732.536024 EM: Round [103] log likelihood: -4358732.527571 EM: Round [104] log likelihood: -4358732.519375 EM: Round [105] log likelihood: -4358732.511426 EM: Round [106] log likelihood: -4358732.503716 EM: Round [107] log likelihood: -4358732.496237 EM: Round [108] log likelihood: -4358732.488980 EM: Round [109] log likelihood: -4358732.481937 EM: Round [110] log likelihood: -4358732.475102 EM: Round [111] log likelihood: -4358732.468467 EM: Round [112] log likelihood: -4358732.462025 EM: Round [113] log likelihood: -4358732.455770 EM: Round [114] log likelihood: -4358732.449696 EM: Round [115] log likelihood: -4358732.443797 EM: Round [116] log likelihood: -4358732.438066 EM: Round [117] log likelihood: -4358732.432499 EM: Round [118] log likelihood: -4358732.427090 EM: Round [119] log likelihood: -4358732.421833 EM: Round [120] log likelihood: -4358732.416725 EM: Round [121] log likelihood: -4358732.411761 EM: Round [122] log likelihood: -4358732.406935 EM: Round [123] log likelihood: -4358732.402244 EM: Round [124] log likelihood: -4358732.397683 EM: Round [125] log likelihood: -4358732.393248 EM: Round [126] log likelihood: -4358732.388936 EM: Round [127] log likelihood: -4358732.384742 EM: Round [128] log likelihood: -4358732.380664 EM: Round [129] log likelihood: -4358732.376697 EM: Round [130] log likelihood: -4358732.372838 EM: Round [131] log likelihood: -4358732.369084 EM: Round [132] log likelihood: -4358732.365431 EM: Round [133] log likelihood: -4358732.361878 EM: Round [134] log likelihood: -4358732.358420 EM: Round [135] log likelihood: -4358732.355055 EM: Round [136] log likelihood: -4358732.351781 EM: Round [137] log likelihood: -4358732.348594 EM: Round [138] log likelihood: -4358732.345493 EM: Round [139] log likelihood: -4358732.342474 EM: Round [140] log likelihood: -4358732.339535 EM: Round [141] log likelihood: -4358732.336674 EM: Round [142] log likelihood: -4358732.333889 EM: Round [143] log likelihood: -4358732.331178 EM: Round [144] log likelihood: -4358732.328538 EM: Round [145] log likelihood: -4358732.325968 EM: Round [146] log likelihood: -4358732.323465 EM: Round [147] log likelihood: -4358732.321028 EM: Round [148] log likelihood: -4358732.318654 EM: Round [149] log likelihood: -4358732.316343 EM: Round [150] log likelihood: -4358732.314092 EM: Round [151] log likelihood: -4358732.311900 EM: Round [152] log likelihood: -4358732.309764 EM: Round [153] log likelihood: -4358732.307684 EM: Round [154] log likelihood: -4358732.305659 EM: Round [155] log likelihood: -4358732.303685 EM: Round [156] log likelihood: -4358732.301763 EM: Round [157] log likelihood: -4358732.299890 EM: Round [158] log likelihood: -4358732.298065 EM: Round [159] log likelihood: -4358732.296288 EM: Round [160] log likelihood: -4358732.294556 EM: Round [161] log likelihood: -4358732.292869 EM: Round [162] log likelihood: -4358732.291225 EM: Round [163] log likelihood: -4358732.289623 EM: Round [164] log likelihood: -4358732.288062 EM: Round [165] log likelihood: -4358732.286541 EM: Round [166] log likelihood: -4358732.285059 EM: Round [167] log likelihood: -4358732.283614 EM: Round [168] log likelihood: -4358732.282207 EM: Round [169] log likelihood: -4358732.280835 EM: Round [170] log likelihood: -4358732.279498 EM: Round [171] log likelihood: -4358732.278195 EM: Round [172] log likelihood: -4358732.276925 EM: Round [173] log likelihood: -4358732.275688 EM: Round [174] log likelihood: -4358732.274481 EM: Round [175] log likelihood: -4358732.273305 EM: Round [176] log likelihood: -4358732.272159 EM: Round [177] log likelihood: -4358732.271042 EM: Round [178] log likelihood: -4358732.269953 EM: Round [179] log likelihood: -4358732.268891 EM: Round [180] log likelihood: -4358732.267856 EM: Round [181] log likelihood: -4358732.266847 EM: Round [182] log likelihood: -4358732.265863 EM: Round [183] log likelihood: -4358732.264904 EM: Round [184] log likelihood: -4358732.263969 EM: Round [185] log likelihood: -4358732.263057 EM: Round [186] log likelihood: -4358732.262168 EM: Round [187] log likelihood: -4358732.261301 EM: Round [188] log likelihood: -4358732.260456 EM: Round [189] log likelihood: -4358732.259632 EM: Round [190] log likelihood: -4358732.258828 EM: Round [191] log likelihood: -4358732.258044 EM: Round [192] log likelihood: -4358732.257280 EM: Round [193] log likelihood: -4358732.256535 EM: Round [194] log likelihood: -4358732.255808 EM: Round [195] log likelihood: -4358732.255099 EM: Round [196] log likelihood: -4358732.254407 EM: Round [197] log likelihood: -4358732.253733 EM: Round [198] log likelihood: -4358732.253075 EM: Round [199] log likelihood: -4358732.252433 EM: Round [200] log likelihood: -4358732.251807 EM: Round [201] log likelihood: -4358732.251196 EM: Round [202] log likelihood: -4358732.250600 EM: Round [203] log likelihood: -4358732.250019 EM: Round [204] log likelihood: -4358732.249452 EM: Round [205] log likelihood: -4358732.248899 EM: Round [206] log likelihood: -4358732.248359 EM: Round [207] log likelihood: -4358732.247833 EM: Round [208] log likelihood: -4358732.247319 EM: Round [209] log likelihood: -4358732.246817 EM: Round [210] log likelihood: -4358732.246328 EM: Round [211] log likelihood: -4358732.245850 EM: Round [212] log likelihood: -4358732.245384 EM: Round [213] log likelihood: -4358732.244930 EM: Round [214] log likelihood: -4358732.244486 EM: Round [215] log likelihood: -4358732.244052 EM: Round [216] log likelihood: -4358732.243629 EM: Round [217] log likelihood: -4358732.243217 EM: Round [218] log likelihood: -4358732.242814 EM: Round [219] log likelihood: -4358732.242420 EM: Round [220] log likelihood: -4358732.242036 EM: Round [221] log likelihood: -4358732.241661 EM: Round [222] log likelihood: -4358732.241295 EM: Round [223] log likelihood: -4358732.240937 EM: Round [224] log likelihood: -4358732.240588 EM: Round [225] log likelihood: -4358732.240248 EM: Round [226] log likelihood: -4358732.239915 EM: Round [227] log likelihood: -4358732.239590 EM: Round [228] log likelihood: -4358732.239272 EM: Round [229] log likelihood: -4358732.238962 EM: Round [230] log likelihood: -4358732.238659 EM: Round [231] log likelihood: -4358732.238363 EM: Round [232] log likelihood: -4358732.238074 EM: Round [233] log likelihood: -4358732.237792 EM: Round [234] log likelihood: -4358732.237516 EM: Round [235] log likelihood: -4358732.237247 EM: Round [236] log likelihood: -4358732.236984 EM: Round [237] log likelihood: -4358732.236726 EM: Round [238] log likelihood: -4358732.236475 EM: Round [239] log likelihood: -4358732.236229 EM: Round [240] log likelihood: -4358732.235989 EM: Round [241] log likelihood: -4358732.235755 EM: Round [242] log likelihood: -4358732.235526 EM: Round [243] log likelihood: -4358732.235302 EM: Round [244] log likelihood: -4358732.235083 EM: Round [245] log likelihood: -4358732.234868 EM: Round [246] log likelihood: -4358732.234659 EM: Round [247] log likelihood: -4358732.234455 EM: Round [248] log likelihood: -4358732.234255 EM: Round [249] log likelihood: -4358732.234059 EM: Round [250] log likelihood: -4358732.233868 EM: Round [251] log likelihood: -4358732.233681 EM: Round [252] log likelihood: -4358732.233498 EM: Round [253] log likelihood: -4358732.233319 EM: Round [254] log likelihood: -4358732.233144 EM: Round [255] log likelihood: -4358732.232973 EM: Round [256] log likelihood: -4358732.232806 EM: Round [257] log likelihood: -4358732.232642 EM: Round [258] log likelihood: -4358732.232482 EM: Round [259] log likelihood: -4358732.232326 EM: Round [260] log likelihood: -4358732.232173 EM: Round [261] log likelihood: -4358732.232023 EM: Round [262] log likelihood: -4358732.231876 EM: Round [263] log likelihood: -4358732.231733 EM: Round [264] log likelihood: -4358732.231593 EM: Round [265] log likelihood: -4358732.231455 EM: Round [266] log likelihood: -4358732.231321 EM: Round [267] log likelihood: -4358732.231189 EM: Round [268] log likelihood: -4358732.231061 EM: Round [269] log likelihood: -4358732.230935 EM: Round [270] log likelihood: -4358732.230811 EM: Round [271] log likelihood: -4358732.230691 EM: Round [272] log likelihood: -4358732.230572 EM: Round [273] log likelihood: -4358732.230457 EM: Round [274] log likelihood: -4358732.230344 EM: Round [275] log likelihood: -4358732.230233 EM: Round [276] log likelihood: -4358732.230124 EM: Round [277] log likelihood: -4358732.230018 EM: Round [278] log likelihood: -4358732.229914 EM: Round [279] log likelihood: -4358732.229812 EM: Round [280] log likelihood: -4358732.229712 EM: Stopping iterations at round 280 due to insufficient improvement in likelihood. EM: Starting log likelihood: -4353530.250089 EM: Round [1] log likelihood: -4353086.995794 EM: Round [2] log likelihood: -4352945.729297 EM: Round [3] log likelihood: -4352883.135201 EM: Round [4] log likelihood: -4352850.808842 EM: Round [5] log likelihood: -4352832.561675 EM: Round [6] log likelihood: -4352821.550440 EM: Round [7] log likelihood: -4352814.506022 EM: Round [8] log likelihood: -4352809.754660 EM: Round [9] log likelihood: -4352806.395259 EM: Round [10] log likelihood: -4352803.920756 EM: Round [11] log likelihood: -4352802.033539 EM: Round [12] log likelihood: -4352800.551684 EM: Round [13] log likelihood: -4352799.359582 EM: Round [14] log likelihood: -4352798.381053 EM: Round [15] log likelihood: -4352797.564192 EM: Round [16] log likelihood: -4352796.872555 EM: Round [17] log likelihood: -4352796.279860 EM: Round [18] log likelihood: -4352795.766695 EM: Round [19] log likelihood: -4352795.318419 EM: Round [20] log likelihood: -4352794.923784 EM: Round [21] log likelihood: -4352794.574007 EM: Round [22] log likelihood: -4352794.262126 EM: Round [23] log likelihood: -4352793.982551 EM: Round [24] log likelihood: -4352793.730743 EM: Round [25] log likelihood: -4352793.502973 EM: Round [26] log likelihood: -4352793.296153 EM: Round [27] log likelihood: -4352793.107698 EM: Round [28] log likelihood: -4352792.935433 EM: Round [29] log likelihood: -4352792.777508 EM: Round [30] log likelihood: -4352792.632345 EM: Round [31] log likelihood: -4352792.498586 EM: Round [32] log likelihood: -4352792.375057 EM: Round [33] log likelihood: -4352792.260736 EM: Round [34] log likelihood: -4352792.154732 EM: Round [35] log likelihood: -4352792.056263 EM: Round [36] log likelihood: -4352791.964638 EM: Round [37] log likelihood: -4352791.879247 EM: Round [38] log likelihood: -4352791.799549 EM: Round [39] log likelihood: -4352791.725060 EM: Round [40] log likelihood: -4352791.655348 EM: Round [41] log likelihood: -4352791.590025 EM: Round [42] log likelihood: -4352791.528743 EM: Round [43] log likelihood: -4352791.471187 EM: Round [44] log likelihood: -4352791.417072 EM: Round [45] log likelihood: -4352791.366141 EM: Round [46] log likelihood: -4352791.318160 EM: Round [47] log likelihood: -4352791.272915 EM: Round [48] log likelihood: -4352791.230212 EM: Round [49] log likelihood: -4352791.189872 EM: Round [50] log likelihood: -4352791.151733 EM: Round [51] log likelihood: -4352791.115646 EM: Round [52] log likelihood: -4352791.081472 EM: Round [53] log likelihood: -4352791.049086 EM: Round [54] log likelihood: -4352791.018373 EM: Round [55] log likelihood: -4352790.989223 EM: Round [56] log likelihood: -4352790.961539 EM: Round [57] log likelihood: -4352790.935228 EM: Round [58] log likelihood: -4352790.910206 EM: Round [59] log likelihood: -4352790.886395 EM: Round [60] log likelihood: -4352790.863721 EM: Round [61] log likelihood: -4352790.842116 EM: Round [62] log likelihood: -4352790.821518 EM: Round [63] log likelihood: -4352790.801869 EM: Round [64] log likelihood: -4352790.783113 EM: Round [65] log likelihood: -4352790.765200 EM: Round [66] log likelihood: -4352790.748083 EM: Round [67] log likelihood: -4352790.731717 EM: Round [68] log likelihood: -4352790.716061 EM: Round [69] log likelihood: -4352790.701077 EM: Round [70] log likelihood: -4352790.686728 EM: Round [71] log likelihood: -4352790.672981 EM: Round [72] log likelihood: -4352790.659804 EM: Round [73] log likelihood: -4352790.647168 EM: Round [74] log likelihood: -4352790.635044 EM: Round [75] log likelihood: -4352790.623406 EM: Round [76] log likelihood: -4352790.612231 EM: Round [77] log likelihood: -4352790.601495 EM: Round [78] log likelihood: -4352790.591176 EM: Round [79] log likelihood: -4352790.581254 EM: Round [80] log likelihood: -4352790.571710 EM: Round [81] log likelihood: -4352790.562526 EM: Round [82] log likelihood: -4352790.553684 EM: Round [83] log likelihood: -4352790.545170 EM: Round [84] log likelihood: -4352790.536967 EM: Round [85] log likelihood: -4352790.529062 EM: Round [86] log likelihood: -4352790.521440 EM: Round [87] log likelihood: -4352790.514090 EM: Round [88] log likelihood: -4352790.506999 EM: Round [89] log likelihood: -4352790.500156 EM: Round [90] log likelihood: -4352790.493549 EM: Round [91] log likelihood: -4352790.487170 EM: Round [92] log likelihood: -4352790.481007 EM: Round [93] log likelihood: -4352790.475052 EM: Round [94] log likelihood: -4352790.469297 EM: Round [95] log likelihood: -4352790.463733 EM: Round [96] log likelihood: -4352790.458352 EM: Round [97] log likelihood: -4352790.453146 EM: Round [98] log likelihood: -4352790.448109 EM: Round [99] log likelihood: -4352790.443234 EM: Round [100] log likelihood: -4352790.438515 EM: Round [101] log likelihood: -4352790.433945 EM: Round [102] log likelihood: -4352790.429519 EM: Round [103] log likelihood: -4352790.425230 EM: Round [104] log likelihood: -4352790.421075 EM: Round [105] log likelihood: -4352790.417048 EM: Round [106] log likelihood: -4352790.413143 EM: Round [107] log likelihood: -4352790.409357 EM: Round [108] log likelihood: -4352790.405686 EM: Round [109] log likelihood: -4352790.402124 EM: Round [110] log likelihood: -4352790.398668 EM: Round [111] log likelihood: -4352790.395315 EM: Round [112] log likelihood: -4352790.392060 EM: Round [113] log likelihood: -4352790.388900 EM: Round [114] log likelihood: -4352790.385832 EM: Round [115] log likelihood: -4352790.382853 EM: Round [116] log likelihood: -4352790.379959 EM: Round [117] log likelihood: -4352790.377147 EM: Round [118] log likelihood: -4352790.374416 EM: Round [119] log likelihood: -4352790.371762 EM: Round [120] log likelihood: -4352790.369182 EM: Round [121] log likelihood: -4352790.366674 EM: Round [122] log likelihood: -4352790.364236 EM: Round [123] log likelihood: -4352790.361865 EM: Round [124] log likelihood: -4352790.359560 EM: Round [125] log likelihood: -4352790.357317 EM: Round [126] log likelihood: -4352790.355136 EM: Round [127] log likelihood: -4352790.353014 EM: Round [128] log likelihood: -4352790.350949 EM: Round [129] log likelihood: -4352790.348940 EM: Round [130] log likelihood: -4352790.346984 EM: Round [131] log likelihood: -4352790.345080 EM: Round [132] log likelihood: -4352790.343227 EM: Round [133] log likelihood: -4352790.341423 EM: Round [134] log likelihood: -4352790.339666 EM: Round [135] log likelihood: -4352790.337955 EM: Round [136] log likelihood: -4352790.336289 EM: Round [137] log likelihood: -4352790.334665 EM: Round [138] log likelihood: -4352790.333084 EM: Round [139] log likelihood: -4352790.331544 EM: Round [140] log likelihood: -4352790.330043 EM: Round [141] log likelihood: -4352790.328580 EM: Round [142] log likelihood: -4352790.327154 EM: Round [143] log likelihood: -4352790.325765 EM: Round [144] log likelihood: -4352790.324411 EM: Round [145] log likelihood: -4352790.323091 EM: Round [146] log likelihood: -4352790.321804 EM: Round [147] log likelihood: -4352790.320549 EM: Round [148] log likelihood: -4352790.319325 EM: Round [149] log likelihood: -4352790.318131 EM: Round [150] log likelihood: -4352790.316968 EM: Round [151] log likelihood: -4352790.315832 EM: Round [152] log likelihood: -4352790.314725 EM: Round [153] log likelihood: -4352790.313645 EM: Round [154] log likelihood: -4352790.312591 EM: Round [155] log likelihood: -4352790.311563 EM: Round [156] log likelihood: -4352790.310559 EM: Round [157] log likelihood: -4352790.309580 EM: Round [158] log likelihood: -4352790.308625 EM: Round [159] log likelihood: -4352790.307692 EM: Round [160] log likelihood: -4352790.306782 EM: Round [161] log likelihood: -4352790.305893 EM: Round [162] log likelihood: -4352790.305026 EM: Round [163] log likelihood: -4352790.304179 EM: Round [164] log likelihood: -4352790.303352 EM: Round [165] log likelihood: -4352790.302545 EM: Round [166] log likelihood: -4352790.301757 EM: Round [167] log likelihood: -4352790.300987 EM: Round [168] log likelihood: -4352790.300235 EM: Round [169] log likelihood: -4352790.299501 EM: Round [170] log likelihood: -4352790.298783 EM: Round [171] log likelihood: -4352790.298083 EM: Round [172] log likelihood: -4352790.297398 EM: Round [173] log likelihood: -4352790.296730 EM: Round [174] log likelihood: -4352790.296077 EM: Round [175] log likelihood: -4352790.295438 EM: Round [176] log likelihood: -4352790.294815 EM: Round [177] log likelihood: -4352790.294205 EM: Round [178] log likelihood: -4352790.293610 EM: Round [179] log likelihood: -4352790.293028 EM: Round [180] log likelihood: -4352790.292459 EM: Round [181] log likelihood: -4352790.291903 EM: Round [182] log likelihood: -4352790.291360 EM: Round [183] log likelihood: -4352790.290829 EM: Round [184] log likelihood: -4352790.290309 EM: Round [185] log likelihood: -4352790.289802 EM: Round [186] log likelihood: -4352790.289305 EM: Round [187] log likelihood: -4352790.288820 EM: Round [188] log likelihood: -4352790.288346 EM: Round [189] log likelihood: -4352790.287882 EM: Round [190] log likelihood: -4352790.287428 EM: Round [191] log likelihood: -4352790.286984 EM: Round [192] log likelihood: -4352790.286550 EM: Round [193] log likelihood: -4352790.286126 EM: Round [194] log likelihood: -4352790.285711 EM: Round [195] log likelihood: -4352790.285305 EM: Round [196] log likelihood: -4352790.284908 EM: Round [197] log likelihood: -4352790.284519 EM: Round [198] log likelihood: -4352790.284139 EM: Round [199] log likelihood: -4352790.283768 EM: Round [200] log likelihood: -4352790.283404 EM: Round [201] log likelihood: -4352790.283048 EM: Round [202] log likelihood: -4352790.282700 EM: Round [203] log likelihood: -4352790.282359 EM: Round [204] log likelihood: -4352790.282026 EM: Round [205] log likelihood: -4352790.281699 EM: Round [206] log likelihood: -4352790.281380 EM: Round [207] log likelihood: -4352790.281067 EM: Round [208] log likelihood: -4352790.280762 EM: Round [209] log likelihood: -4352790.280462 EM: Round [210] log likelihood: -4352790.280169 EM: Round [211] log likelihood: -4352790.279882 EM: Round [212] log likelihood: -4352790.279602 EM: Round [213] log likelihood: -4352790.279327 EM: Round [214] log likelihood: -4352790.279058 EM: Round [215] log likelihood: -4352790.278795 EM: Round [216] log likelihood: -4352790.278537 EM: Round [217] log likelihood: -4352790.278284 EM: Round [218] log likelihood: -4352790.278037 EM: Round [219] log likelihood: -4352790.277795 EM: Round [220] log likelihood: -4352790.277558 EM: Round [221] log likelihood: -4352790.277326 EM: Round [222] log likelihood: -4352790.277099 EM: Round [223] log likelihood: -4352790.276876 EM: Round [224] log likelihood: -4352790.276658 EM: Round [225] log likelihood: -4352790.276445 EM: Round [226] log likelihood: -4352790.276236 EM: Round [227] log likelihood: -4352790.276031 EM: Round [228] log likelihood: -4352790.275830 EM: Round [229] log likelihood: -4352790.275634 EM: Round [230] log likelihood: -4352790.275442 EM: Round [231] log likelihood: -4352790.275253 EM: Round [232] log likelihood: -4352790.275069 EM: Round [233] log likelihood: -4352790.274888 EM: Round [234] log likelihood: -4352790.274710 EM: Round [235] log likelihood: -4352790.274537 EM: Round [236] log likelihood: -4352790.274367 EM: Round [237] log likelihood: -4352790.274200 EM: Round [238] log likelihood: -4352790.274037 EM: Round [239] log likelihood: -4352790.273877 EM: Round [240] log likelihood: -4352790.273720 EM: Round [241] log likelihood: -4352790.273567 EM: Round [242] log likelihood: -4352790.273416 EM: Round [243] log likelihood: -4352790.273269 EM: Round [244] log likelihood: -4352790.273124 EM: Round [245] log likelihood: -4352790.272982 EM: Round [246] log likelihood: -4352790.272844 EM: Round [247] log likelihood: -4352790.272708 EM: Round [248] log likelihood: -4352790.272574 EM: Round [249] log likelihood: -4352790.272443 EM: Round [250] log likelihood: -4352790.272315 EM: Round [251] log likelihood: -4352790.272190 EM: Round [252] log likelihood: -4352790.272067 EM: Round [253] log likelihood: -4352790.271946 EM: Round [254] log likelihood: -4352790.271828 EM: Round [255] log likelihood: -4352790.271712 EM: Round [256] log likelihood: -4352790.271598 EM: Round [257] log likelihood: -4352790.271487 EM: Round [258] log likelihood: -4352790.271378 EM: Round [259] log likelihood: -4352790.271271 EM: Round [260] log likelihood: -4352790.271166 EM: Round [261] log likelihood: -4352790.271063 EM: Round [262] log likelihood: -4352790.270962 EM: Round [263] log likelihood: -4352790.270863 EM: Stopping iterations at round 263 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.cUFto5FZ89/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.cUFto5FZ89/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.cUFto5FZ89/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 294646584 > /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.cUFto5FZ89/ctat_genome_lib_build_dir > /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.cUFto5FZ89/ctat_genome_lib_build_dir --annotate /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.cUFto5FZ89/ctat_genome_lib_build_dir -done, see /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.cUFto5FZ89/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 564, filtered: 3106) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.cUFto5FZ89/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.cUFto5FZ89/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000255139.2] WARNING, no entry stored in dbm for [ENSG00000281103.2] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000250251.6] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000259098.1] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000276758.1] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000232894.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000243753.5] WARNING, no entry stored in dbm for [ENSG00000181126.13] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000284977.2] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000197847.12] WARNING, no entry stored in dbm for [ENSG00000258451.1] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000260727.2] WARNING, no entry stored in dbm for [ENSG00000203413.3] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000230006.7] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000255185.6] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000282057.1] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000278834.1] WARNING, no entry stored in dbm for [ENSG00000232527.8] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000279058.2] WARNING, no entry stored in dbm for [ENSG00000267198.1] WARNING, no entry stored in dbm for [ENSG00000131484.4] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000274712.2] WARNING, no entry stored in dbm for [ENSG00000285051.2] WARNING, no entry stored in dbm for [ENSG00000286953.1] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000251557.2] WARNING, no entry stored in dbm for [ENSG00000251079.6] WARNING, no entry stored in dbm for [ENSG00000266356.1] WARNING, no entry stored in dbm for [ENSG00000213650.3] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000204622.11] WARNING, no entry stored in dbm for [ENSG00000225851.1] WARNING, no entry stored in dbm for [ENSG00000229608.1] WARNING, no entry stored in dbm for [ENSG00000283036.3] WARNING, no entry stored in dbm for [ENSG00000236698.1] WARNING, no entry stored in dbm for [ENSG00000230239.1] WARNING, no entry stored in dbm for [ENSG00000242999.3] WARNING, no entry stored in dbm for [ENSG00000218048.2] WARNING, no entry stored in dbm for [ENSG00000106133.18] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000215483.11] WARNING, no entry stored in dbm for [ENSG00000283345.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [ENSG00000285600.1] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000242338.6] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000275139.1] WARNING, no entry stored in dbm for [ENSG00000266904.6] WARNING, no entry stored in dbm for [ENSG00000287920.1] WARNING, no entry stored in dbm for [ENSG00000273125.2] WARNING, no entry stored in dbm for [ENSG00000215546.2] WARNING, no entry stored in dbm for [ENSG00000206028.1] WARNING, no entry stored in dbm for [ENSG00000251129.2] WARNING, no entry stored in dbm for [ENSG00000260924.2] WARNING, no entry stored in dbm for [ENSG00000241207.1] WARNING, no entry stored in dbm for [ENSG00000236438.7] WARNING, no entry stored in dbm for [ENSG00000258454.1] WARNING, no entry stored in dbm for [ENSG00000259755.1] WARNING, no entry stored in dbm for [ENSG00000251079.6] WARNING, no entry stored in dbm for [ENSG00000256591.5] WARNING, no entry stored in dbm for [ENSG00000227619.3] WARNING, no entry stored in dbm for [ENSG00000261011.1] WARNING, no entry stored in dbm for [ENSG00000243289.1] WARNING, no entry stored in dbm for [ENSG00000267198.1] WARNING, no entry stored in dbm for [ENSG00000131484.4] WARNING, no entry stored in dbm for [ENSG00000274712.2] WARNING, no entry stored in dbm for [ENSG00000231884.1] WARNING, no entry stored in dbm for [ENSG00000249489.1] WARNING, no entry stored in dbm for [ENSG00000277977.1] WARNING, no entry stored in dbm for [ENSG00000228507.1] WARNING, no entry stored in dbm for [ENSG00000228507.1] WARNING, no entry stored in dbm for [ENSG00000228507.1] WARNING, no entry stored in dbm for [ENSG00000230565.1] WARNING, no entry stored in dbm for [ENSG00000261590.1] WARNING, no entry stored in dbm for [ENSG00000283944.1] WARNING, no entry stored in dbm for [ENSG00000205325.3] WARNING, no entry stored in dbm for [ENSG00000268635.2] WARNING, no entry stored in dbm for [ENSG00000267809.1] WARNING, no entry stored in dbm for [ENSG00000223546.7] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000236130.2] WARNING, no entry stored in dbm for [ENSG00000287262.1] WARNING, no entry stored in dbm for [ENSG00000226054.2] WARNING, no entry stored in dbm for [ENSG00000240549.2] WARNING, no entry stored in dbm for [ENSG00000236044.1] WARNING, no entry stored in dbm for [ENSG00000234911.2] WARNING, no entry stored in dbm for [ENSG00000251313.1] WARNING, no entry stored in dbm for [ENSG00000235512.1] WARNING, no entry stored in dbm for [ENSG00000257444.1] WARNING, no entry stored in dbm for [ENSG00000228876.4] WARNING, no entry stored in dbm for [ENSG00000231607.13] WARNING, no entry stored in dbm for [ENSG00000245748.1] WARNING, no entry stored in dbm for [ENSG00000225345.3] WARNING, no entry stored in dbm for [ENSG00000236060.2] WARNING, no entry stored in dbm for [ENSG00000237714.1] WARNING, no entry stored in dbm for [ENSG00000224081.9] WARNING, no entry stored in dbm for [ENSG00000259776.1] WARNING, no entry stored in dbm for [ENSG00000213970.4] WARNING, no entry stored in dbm for [ENSG00000274421.1] WARNING, no entry stored in dbm for [ENSG00000245958.6] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000281641.3] WARNING, no entry stored in dbm for [ENSG00000272030.1] WARNING, no entry stored in dbm for [ENSG00000233071.3] WARNING, no entry stored in dbm for [ENSG00000183298.5] WARNING, no entry stored in dbm for [ENSG00000228335.1] WARNING, no entry stored in dbm for [ENSG00000238069.1] WARNING, no entry stored in dbm for [ENSG00000244705.1] WARNING, no entry stored in dbm for [ENSG00000244363.3] WARNING, no entry stored in dbm for [ENSG00000233518.1] WARNING, no entry stored in dbm for [ENSG00000236806.1] WARNING, no entry stored in dbm for [ENSG00000242445.1] WARNING, no entry stored in dbm for [ENSG00000219747.1] WARNING, no entry stored in dbm for [ENSG00000224796.1] WARNING, no entry stored in dbm for [ENSG00000241582.1] WARNING, no entry stored in dbm for [ENSG00000234851.4] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000239199.1] WARNING, no entry stored in dbm for [ENSG00000243181.2] WARNING, no entry stored in dbm for [ENSG00000225661.7] WARNING, no entry stored in dbm for [ENSG00000139239.7] WARNING, no entry stored in dbm for [ENSG00000237169.1] WARNING, no entry stored in dbm for [ENSG00000243824.1] WARNING, no entry stored in dbm for [ENSG00000260034.1] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000214182.5] WARNING, no entry stored in dbm for [ENSG00000214182.5] WARNING, no entry stored in dbm for [ENSG00000234518.2] WARNING, no entry stored in dbm for [ENSG00000254285.3] WARNING, no entry stored in dbm for [ENSG00000220585.4] WARNING, no entry stored in dbm for [ENSG00000250444.1] WARNING, no entry stored in dbm for [ENSG00000270571.2] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000233448.2] WARNING, no entry stored in dbm for [ENSG00000274461.2] WARNING, no entry stored in dbm for [ENSG00000224477.5] WARNING, no entry stored in dbm for [ENSG00000256751.6] WARNING, no entry stored in dbm for [ENSG00000253301.6] WARNING, no entry stored in dbm for [ENSG00000279077.1] WARNING, no entry stored in dbm for [ENSG00000183444.10] WARNING, no entry stored in dbm for [ENSG00000179799.9] WARNING, no entry stored in dbm for [ENSG00000238152.2] WARNING, no entry stored in dbm for [ENSG00000284707.2] WARNING, no entry stored in dbm for [ENSG00000246528.3] WARNING, no entry stored in dbm for [ENSG00000225377.6] WARNING, no entry stored in dbm for [ENSG00000198590.12] WARNING, no entry stored in dbm for [ENSG00000215086.2] WARNING, no entry stored in dbm for [ENSG00000233382.7] WARNING, no entry stored in dbm for [ENSG00000225031.1] WARNING, no entry stored in dbm for [ENSG00000259918.1] WARNING, no entry stored in dbm for [ENSG00000243847.3] WARNING, no entry stored in dbm for [ENSG00000272150.5] WARNING, no entry stored in dbm for [ENSG00000131401.11] WARNING, no entry stored in dbm for [ENSG00000259275.4] WARNING, no entry stored in dbm for [ENSG00000214049.8] WARNING, no entry stored in dbm for [ENSG00000231501.1] WARNING, no entry stored in dbm for [ENSG00000225536.2] WARNING, no entry stored in dbm for [ENSG00000270069.1] WARNING, no entry stored in dbm for [ENSG00000235724.10] WARNING, no entry stored in dbm for [ENSG00000256843.1] WARNING, no entry stored in dbm for [ENSG00000230699.2] WARNING, no entry stored in dbm for [ENSG00000239883.8] WARNING, no entry stored in dbm for [ENSG00000231312.7] WARNING, no entry stored in dbm for [ENSG00000267278.6] WARNING, no entry stored in dbm for [ENSG00000248973.3] WARNING, no entry stored in dbm for [ENSG00000215241.4] WARNING, no entry stored in dbm for [ENSG00000234184.6] WARNING, no entry stored in dbm for [ENSG00000245937.8] WARNING, no entry stored in dbm for [ENSG00000229404.6] WARNING, no entry stored in dbm for [ENSG00000229240.9] WARNING, no entry stored in dbm for [ENSG00000262480.2] WARNING, no entry stored in dbm for [ENSG00000258548.6] WARNING, no entry stored in dbm for [ENSG00000238121.6] WARNING, no entry stored in dbm for [ENSG00000238133.6] WARNING, no entry stored in dbm for [ENSG00000179219.5] WARNING, no entry stored in dbm for [ENSG00000283945.1] WARNING, no entry stored in dbm for [ENSG00000237854.3] WARNING, no entry stored in dbm for [ENSG00000233144.1] WARNING, no entry stored in dbm for [ENSG00000257702.3] WARNING, no entry stored in dbm for [ENSG00000231748.1] WARNING, no entry stored in dbm for [ENSG00000224520.2] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000226419.8] WARNING, no entry stored in dbm for [ENSG00000233308.2] WARNING, no entry stored in dbm for [ENSG00000246174.9] WARNING, no entry stored in dbm for [ENSG00000271856.1] WARNING, no entry stored in dbm for [ENSG00000235734.4] WARNING, no entry stored in dbm for [ENSG00000180769.10] WARNING, no entry stored in dbm for [ENSG00000248205.1] WARNING, no entry stored in dbm for [ENSG00000237181.1] WARNING, no entry stored in dbm for [ENSG00000263070.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000250959.2] WARNING, no entry stored in dbm for [ENSG00000180229.12] WARNING, no entry stored in dbm for [ENSG00000236969.2] WARNING, no entry stored in dbm for [ENSG00000276160.1] WARNING, no entry stored in dbm for [ENSG00000214184.3] WARNING, no entry stored in dbm for [ENSG00000219881.1] WARNING, no entry stored in dbm for [ENSG00000256963.1] WARNING, no entry stored in dbm for [ENSG00000240253.6] WARNING, no entry stored in dbm for [ENSG00000236438.7] WARNING, no entry stored in dbm for [ENSG00000250075.7] WARNING, no entry stored in dbm for [ENSG00000282924.1] WARNING, no entry stored in dbm for [ENSG00000180673.9] WARNING, no entry stored in dbm for [ENSG00000262096.2] WARNING, no entry stored in dbm for [ENSG00000223544.1] WARNING, no entry stored in dbm for [ENSG00000229847.9] WARNING, no entry stored in dbm for [ENSG00000234152.1] WARNING, no entry stored in dbm for [ENSG00000228887.3] WARNING, no entry stored in dbm for [ENSG00000229280.1] WARNING, no entry stored in dbm for [ENSG00000225728.2] WARNING, no entry stored in dbm for [ENSG00000287765.1] WARNING, no entry stored in dbm for [ENSG00000214826.5] WARNING, no entry stored in dbm for [ENSG00000255733.6] WARNING, no entry stored in dbm for [ENSG00000259678.1] WARNING, no entry stored in dbm for [ENSG00000259295.6] WARNING, no entry stored in dbm for [ENSG00000168405.17] WARNING, no entry stored in dbm for [ENSG00000205559.5] WARNING, no entry stored in dbm for [ENSG00000285668.1] WARNING, no entry stored in dbm for [ENSG00000269951.1] WARNING, no entry stored in dbm for [ENSG00000227676.4] WARNING, no entry stored in dbm for [ENSG00000253366.3] WARNING, no entry stored in dbm for [ENSG00000279968.3] WARNING, no entry stored in dbm for [ENSG00000234773.7] WARNING, no entry stored in dbm for [ENSG00000254633.2] WARNING, no entry stored in dbm for [ENSG00000274033.1] WARNING, no entry stored in dbm for [ENSG00000249669.10] WARNING, no entry stored in dbm for [ENSG00000227742.2] WARNING, no entry stored in dbm for [ENSG00000270453.1] WARNING, no entry stored in dbm for [ENSG00000204949.9] WARNING, no entry stored in dbm for [ENSG00000280424.1] WARNING, no entry stored in dbm for [ENSG00000251079.6] WARNING, no entry stored in dbm for [ENSG00000233967.7] WARNING, no entry stored in dbm for [ENSG00000247081.8] WARNING, no entry stored in dbm for [ENSG00000237945.7] WARNING, no entry stored in dbm for [ENSG00000285623.1] WARNING, no entry stored in dbm for [ENSG00000226835.3] WARNING, no entry stored in dbm for [ENSG00000275146.1] WARNING, no entry stored in dbm for [ENSG00000234479.2] WARNING, no entry stored in dbm for [ENSG00000242156.1] WARNING, no entry stored in dbm for [ENSG00000255114.1] WARNING, no entry stored in dbm for [ENSG00000259933.6] WARNING, no entry stored in dbm for [ENSG00000256591.5] WARNING, no entry stored in dbm for [ENSG00000239079.1] WARNING, no entry stored in dbm for [ENSG00000279081.2] WARNING, no entry stored in dbm for [ENSG00000283633.1] WARNING, no entry stored in dbm for [ENSG00000231355.1] WARNING, no entry stored in dbm for [ENSG00000236375.3] WARNING, no entry stored in dbm for [ENSG00000274114.2] WARNING, no entry stored in dbm for [ENSG00000238005.4] WARNING, no entry stored in dbm for [ENSG00000227619.3] WARNING, no entry stored in dbm for [ENSG00000235582.2] WARNING, no entry stored in dbm for [ENSG00000215016.2] WARNING, no entry stored in dbm for [ENSG00000233411.1] WARNING, no entry stored in dbm for [ENSG00000271551.2] WARNING, no entry stored in dbm for [ENSG00000215093.3] WARNING, no entry stored in dbm for [ENSG00000273550.2] WARNING, no entry stored in dbm for [ENSG00000234773.7] WARNING, no entry stored in dbm for [ENSG00000225032.5] WARNING, no entry stored in dbm for [ENSG00000227220.1] WARNING, no entry stored in dbm for [ENSG00000277476.1] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000288046.1] WARNING, no entry stored in dbm for [ENSG00000282740.1] WARNING, no entry stored in dbm for [ENSG00000231999.7] WARNING, no entry stored in dbm for [ENSG00000245498.7] WARNING, no entry stored in dbm for [ENSG00000277702.1] WARNING, no entry stored in dbm for [ENSG00000260126.2] WARNING, no entry stored in dbm for [ENSG00000254681.6] WARNING, no entry stored in dbm for [ENSG00000279196.1] WARNING, no entry stored in dbm for [ENSG00000278212.2] WARNING, no entry stored in dbm for [ENSG00000198555.7] WARNING, no entry stored in dbm for [ENSG00000260335.1] WARNING, no entry stored in dbm for [ENSG00000236722.1] WARNING, no entry stored in dbm for [ENSG00000243071.1] WARNING, no entry stored in dbm for [ENSG00000229097.1] WARNING, no entry stored in dbm for [ENSG00000250159.7] WARNING, no entry stored in dbm for [ENSG00000241770.1] WARNING, no entry stored in dbm for [ENSG00000254285.3] WARNING, no entry stored in dbm for [ENSG00000286436.1] WARNING, no entry stored in dbm for [ENSG00000241860.7] WARNING, no entry stored in dbm for [ENSG00000260278.1] WARNING, no entry stored in dbm for [ENSG00000237705.1] WARNING, no entry stored in dbm for [ENSG00000277007.1] WARNING, no entry stored in dbm for [ENSG00000251378.1] WARNING, no entry stored in dbm for [ENSG00000286839.1] WARNING, no entry stored in dbm for [ENSG00000205746.9] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000248126.1] WARNING, no entry stored in dbm for [ENSG00000225026.1] WARNING, no entry stored in dbm for [ENSG00000284783.1] WARNING, no entry stored in dbm for [ENSG00000285035.1] WARNING, no entry stored in dbm for [ENSG00000265936.1] WARNING, no entry stored in dbm for [ENSG00000214259.3] WARNING, no entry stored in dbm for [ENSG00000264151.6] WARNING, no entry stored in dbm for [ENSG00000236044.1] WARNING, no entry stored in dbm for [ENSG00000261628.1] WARNING, no entry stored in dbm for [ENSG00000259845.1] WARNING, no entry stored in dbm for [ENSG00000259380.6] WARNING, no entry stored in dbm for [ENSG00000253715.1] WARNING, no entry stored in dbm for [ENSG00000269274.1] WARNING, no entry stored in dbm for [ENSG00000269274.1] WARNING, no entry stored in dbm for [ENSG00000269373.1] WARNING, no entry stored in dbm for [ENSG00000239985.2] WARNING, no entry stored in dbm for [ENSG00000239985.2] WARNING, no entry stored in dbm for [ENSG00000230189.7] WARNING, no entry stored in dbm for [ENSG00000287710.1] WARNING, no entry stored in dbm for [ENSG00000259299.1] WARNING, no entry stored in dbm for [ENSG00000213527.5] WARNING, no entry stored in dbm for [ENSG00000260413.1] WARNING, no entry stored in dbm for [ENSG00000261273.1] WARNING, no entry stored in dbm for [ENSG00000286909.1] WARNING, no entry stored in dbm for [ENSG00000258449.1] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000242338.6] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000242338.6] WARNING, no entry stored in dbm for [ENSG00000248898.3] WARNING, no entry stored in dbm for [ENSG00000272800.3] WARNING, no entry stored in dbm for [ENSG00000279382.1] WARNING, no entry stored in dbm for [ENSG00000280417.1] WARNING, no entry stored in dbm for [ENSG00000259495.3] WARNING, no entry stored in dbm for [ENSG00000269032.1] WARNING, no entry stored in dbm for [ENSG00000223508.5] WARNING, no entry stored in dbm for [ENSG00000244675.2] WARNING, no entry stored in dbm for [ENSG00000186148.13] WARNING, no entry stored in dbm for [ENSG00000274499.1] WARNING, no entry stored in dbm for [ENSG00000260772.1] WARNING, no entry stored in dbm for [ENSG00000277977.1] WARNING, no entry stored in dbm for [ENSG00000224675.1] WARNING, no entry stored in dbm for [ENSG00000272234.1] WARNING, no entry stored in dbm for [ENSG00000244055.2] WARNING, no entry stored in dbm for [ENSG00000227827.3] WARNING, no entry stored in dbm for [ENSG00000264044.1] WARNING, no entry stored in dbm for [ENSG00000245385.2] WARNING, no entry stored in dbm for [ENSG00000266368.1] * STAR-Fusion complete. See output: /tmp/nxf.cUFto5FZ89/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)