Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/d3d8587d0c13b786a10becb635d51b/1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/e59bfa7c193a2490b8d360549d3266/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/d3d8587d0c13b786a10becb635d51b/1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/e59bfa7c193a2490b8d360549d3266/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/4ae57a790d79b95a1c08daa9f95515/1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.Ir91kNnE1W/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary
-sample contains 293658735 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir  -J /tmp/nxf.Ir91kNnE1W/1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction  -O /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.Ir91kNnE1W/1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction
-building interval tree based on /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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-building interval tree based on /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

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[2700000], rate=53430.08/min 
[2710000], rate=53522.05/min 
-building interval tree based on /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=100000.00/min 
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[3670000], rate=57105.81/min 
[3680000], rate=57157.65/min 
[3690000], rate=57209.30/min -building interval tree based on /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.07 min).
-mapping reads to genes

[10000], rate=100000.00/min 
[20000], rate=100000.00/min 
[30000], rate=94736.84/min 
[40000], rate=92307.69/min 
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[2650000], rate=39601.49/min 
[2660000], rate=39681.75/min 
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[2680000], rate=39811.83/min 
[2690000], rate=n 
[2720000], rate=45573.86/min 
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[3670000], rate=50034.08/min 39871.54/min 
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[3500000], rate=45025.73/min 
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[3600000], rate=45782.11/min 
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[3620000], rate=45929.37/min 
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[3650000], rate=46163.58/min 
[3660000], rate=46260.80/min 
[3670000], rate=46338.38/min 
[3680000], rate=46425.57/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
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done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.Ir91kNnE1W/1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -1965260.427835
EM: Round [1] log likelihood: -1964779.762501
EM: Round [2] log likelihood: -1964611.136563
EM: Round [3] log likelihood: -1964532.670969
EM: Round [4] log likelihood: -1964490.821666
EM: Round [5] log likelihood: -1964466.579824
EM: Round [6] log likelihood: -1964451.637348
EM: Round [7] log likelihood: -1964441.917890
EM: Round [8] log likelihood: -1964435.284158
EM: Round [9] log likelihood: -1964430.560918
EM: Round [10] log likelihood: -1964427.073669
EM: Round [11] log likelihood: -1964424.418869
EM: Round [12] log likelihood: -1964422.345257
EM: Round [13] log likelihood: -1964420.690463
EM: Round [14] log likelihood: -1964419.345947
EM: Round [15] log likelihood: -1964418.236892
EM: Round [16] log likelihood: -1964417.310286
EM: Round [17] log likelihood: -1964416.527618
EM: Round [18] log likelihood: -1964415.860282
EM: Round [19] log likelihood: -1964415.286601
EM: Round [20] log likelihood: -1964414.789861
EM: Round [21] log likelihood: -1964414.356975
EM: Round [22] log likelihood: -1964413.977556
EM: Round [23] log likelihood: -1964413.643265
EM: Round [24] log likelihood: -1964413.347336
EM: Round [25] log likelihood: -1964413.084229
EM: Round [26] log likelihood: -1964412.849372
EM: Round [27] log likelihood: -1964412.638959
EM: Round [28] log likelihood: -1964412.449805
EM: Round [29] log likelihood: -1964412.279226
EM: Round [30] log likelihood: -1964412.124945
EM: Round [31] log likelihood: -1964411.985024
EM: Round [32] log likelihood: -1964411.857802
EM: Round [33] log likelihood: -1964411.741849
EM: Round [34] log likelihood: -1964411.635929
EM: Round [35] log likelihood: -1964411.538970
EM: Round [36] log likelihood: -1964411.450037
EM: Round [37] log likelihood: -1964411.368314
EM: Round [38] log likelihood: -1964411.293083
EM: Round [39] log likelihood: -1964411.223711
EM: Round [40] log likelihood: -1964411.159641
EM: Round [41] log likelihood: -1964411.100379
EM: Round [42] log likelihood: -1964411.045486
EM: Round [43] log likelihood: -1964410.994569
EM: Round [44] log likelihood: -1964410.947281
EM: Round [45] log likelihood: -1964410.903307
EM: Round [46] log likelihood: -1964410.862367
EM: Round [47] log likelihood: -1964410.824210
EM: Round [48] log likelihood: -1964410.788607
EM: Round [49] log likelihood: -1964410.755353
EM: Round [50] log likelihood: -1964410.724262
EM: Round [51] log likelihood: -1964410.695166
EM: Round [52] log likelihood: -1964410.667912
EM: Round [53] log likelihood: -1964410.642362
EM: Round [54] log likelihood: -1964410.618387
EM: Round [55] log likelihood: -1964410.595874
EM: Round [56] log likelihood: -1964410.574716
EM: Round [57] log likelihood: -1964410.554817
EM: Round [58] log likelihood: -1964410.536088
EM: Round [59] log likelihood: -1964410.518448
EM: Round [60] log likelihood: -1964410.501823
EM: Round [61] log likelihood: -1964410.486143
EM: Round [62] log likelihood: -1964410.471347
EM: Round [63] log likelihood: -1964410.457375
EM: Round [64] log likelihood: -1964410.444173
EM: Round [65] log likelihood: -1964410.431693
EM: Round [66] log likelihood: -1964410.419888
EM: Round [67] log likelihood: -1964410.408716
EM: Round [68] log likelihood: -1964410.398137
EM: Round [69] log likelihood: -1964410.388114
EM: Round [70] log likelihood: -1964410.378615
EM: Round [71] log likelihood: -1964410.369606
EM: Round [72] log likelihood: -1964410.361060
EM: Round [73] log likelihood: -1964410.352948
EM: Round [74] log likelihood: -1964410.345245
EM: Round [75] log likelihood: -1964410.337928
EM: Round [76] log likelihood: -1964410.330973
EM: Round [77] log likelihood: -1964410.324362
EM: Round [78] log likelihood: -1964410.318074
EM: Round [79] log likelihood: -1964410.312091
EM: Round [80] log likelihood: -1964410.306396
EM: Round [81] log likelihood: -1964410.300974
EM: Round [82] log likelihood: -1964410.295809
EM: Round [83] log likelihood: -1964410.290888
EM: Round [84] log likelihood: -1964410.286198
EM: Round [85] log likelihood: -1964410.281727
EM: Round [86] log likelihood: -1964410.277462
EM: Round [87] log likelihood: -1964410.273394
EM: Round [88] log likelihood: -1964410.269511
EM: Round [89] log likelihood: -1964410.265805
EM: Round [90] log likelihood: -1964410.262266
EM: Round [91] log likelihood: -1964410.258886
EM: Round [92] log likelihood: -1964410.255658
EM: Round [93] log likelihood: -1964410.252572
EM: Round [94] log likelihood: -1964410.249623
EM: Round [95] log likelihood: -1964410.246803
EM: Round [96] log likelihood: -1964410.244106
EM: Round [97] log likelihood: -1964410.241527
EM: Round [98] log likelihood: -1964410.239059
EM: Round [99] log likelihood: -1964410.236697
EM: Round [100] log likelihood: -1964410.234437
EM: Round [101] log likelihood: -1964410.232273
EM: Round [102] log likelihood: -1964410.230200
EM: Round [103] log likelihood: -1964410.228215
EM: Round [104] log likelihood: -1964410.226313
EM: Round [105] log likelihood: -1964410.224491
EM: Round [106] log likelihood: -1964410.222745
EM: Round [107] log likelihood: -1964410.221071
EM: Round [108] log likelihood: -1964410.219466
EM: Round [109] log likelihood: -1964410.217927
EM: Round [110] log likelihood: -1964410.216451
EM: Round [111] log likelihood: -1964410.215035
EM: Round [112] log likelihood: -1964410.213677
EM: Round [113] log likelihood: -1964410.212373
EM: Round [114] log likelihood: -1964410.211122
EM: Round [115] log likelihood: -1964410.209921
EM: Round [116] log likelihood: -1964410.208769
EM: Round [117] log likelihood: -1964410.207662
EM: Round [118] log likelihood: -1964410.206598
EM: Round [119] log likelihood: -1964410.205577
EM: Round [120] log likelihood: -1964410.204596
EM: Round [121] log likelihood: -1964410.203654
EM: Round [122] log likelihood: -1964410.202748
EM: Round [123] log likelihood: -1964410.201878
EM: Round [124] log likelihood: -1964410.201041
EM: Round [125] log likelihood: -1964410.200236
EM: Round [126] log likelihood: -1964410.199463
EM: Round [127] log likelihood: -1964410.198719
EM: Round [128] log likelihood: -1964410.198004
EM: Round [129] log likelihood: -1964410.197316
EM: Round [130] log likelihood: -1964410.196654
EM: Round [131] log likelihood: -1964410.196017
EM: Round [132] log likelihood: -1964410.195404
EM: Round [133] log likelihood: -1964410.194814
EM: Round [134] log likelihood: -1964410.194247
EM: Round [135] log likelihood: -1964410.193700
EM: Round [136] log likelihood: -1964410.193174
EM: Round [137] log likelihood: -1964410.192667
EM: Round [138] log likelihood: -1964410.192179
EM: Round [139] log likelihood: -1964410.191710
EM: Round [140] log likelihood: -1964410.191257
EM: Round [141] log likelihood: -1964410.190821
EM: Round [142] log likelihood: -1964410.190401
EM: Round [143] log likelihood: -1964410.189996
EM: Round [144] log likelihood: -1964410.189605
EM: Round [145] log likelihood: -1964410.189229
EM: Round [146] log likelihood: -1964410.188867
EM: Round [147] log likelihood: -1964410.188517
EM: Round [148] log likelihood: -1964410.188180
EM: Round [149] log likelihood: -1964410.187855
EM: Round [150] log likelihood: -1964410.187542
EM: Round [151] log likelihood: -1964410.187239
EM: Round [152] log likelihood: -1964410.186948
EM: Round [153] log likelihood: -1964410.186666
EM: Round [154] log likelihood: -1964410.186395
EM: Round [155] log likelihood: -1964410.186133
EM: Round [156] log likelihood: -1964410.185880
EM: Round [157] log likelihood: -1964410.185636
EM: Round [158] log likelihood: -1964410.185400
EM: Round [159] log likelihood: -1964410.185173
EM: Round [160] log likelihood: -1964410.184953
EM: Round [161] log likelihood: -1964410.184741
EM: Round [162] log likelihood: -1964410.184536
EM: Round [163] log likelihood: -1964410.184338
EM: Round [164] log likelihood: -1964410.184147
EM: Round [165] log likelihood: -1964410.183962
EM: Round [166] log likelihood: -1964410.183783
EM: Round [167] log likelihood: -1964410.183611
EM: Round [168] log likelihood: -1964410.183444
EM: Round [169] log likelihood: -1964410.183283
EM: Round [170] log likelihood: -1964410.183127
EM: Round [171] log likelihood: -1964410.182977
EM: Round [172] log likelihood: -1964410.182831
EM: Round [173] log likelihood: -1964410.182690
EM: Round [174] log likelihood: -1964410.182554
EM: Round [175] log likelihood: -1964410.182422
EM: Round [176] log likelihood: -1964410.182294
EM: Round [177] log likelihood: -1964410.182171
EM: Round [178] log likelihood: -1964410.182052
EM: Round [179] log likelihood: -1964410.181936
EM: Round [180] log likelihood: -1964410.181824
EM: Round [181] log likelihood: -1964410.181716
EM: Round [182] log likelihood: -1964410.181611
EM: Round [183] log likelihood: -1964410.181510
EM: Round [184] log likelihood: -1964410.181411
EM: Stopping iterations at round 184 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -1963245.736939
EM: Round [1] log likelihood: -1962842.606548
EM: Round [2] log likelihood: -1962705.201610
EM: Round [3] log likelihood: -1962642.221833
EM: Round [4] log likelihood: -1962609.130717
EM: Round [5] log likelihood: -1962590.310039
EM: Round [6] log likelihood: -1962578.958614
EM: Round [7] log likelihood: -1962571.754992
EM: Round [8] log likelihood: -1962566.969083
EM: Round [9] log likelihood: -1962563.656951
EM: Round [10] log likelihood: -1962561.281578
EM: Round [11] log likelihood: -1962559.524837
EM: Round [12] log likelihood: -1962558.190882
EM: Round [13] log likelihood: -1962557.154796
EM: Round [14] log likelihood: -1962556.334316
EM: Round [15] log likelihood: -1962555.673678
EM: Round [16] log likelihood: -1962555.134084
EM: Round [17] log likelihood: -1962554.687877
EM: Round [18] log likelihood: -1962554.314909
EM: Round [19] log likelihood: -1962554.000203
EM: Round [20] log likelihood: -1962553.732428
EM: Round [21] log likelihood: -1962553.502868
EM: Round [22] log likelihood: -1962553.304732
EM: Round [23] log likelihood: -1962553.132656
EM: Round [24] log likelihood: -1962552.982363
EM: Round [25] log likelihood: -1962552.850405
EM: Round [26] log likelihood: -1962552.733983
EM: Round [27] log likelihood: -1962552.630801
EM: Round [28] log likelihood: -1962552.538970
EM: Round [29] log likelihood: -1962552.456918
EM: Round [30] log likelihood: -1962552.383334
EM: Round [31] log likelihood: -1962552.317116
EM: Round [32] log likelihood: -1962552.257334
EM: Round [33] log likelihood: -1962552.203199
EM: Round [34] log likelihood: -1962552.154036
EM: Round [35] log likelihood: -1962552.109270
EM: Round [36] log likelihood: -1962552.068403
EM: Round [37] log likelihood: -1962552.031007
EM: Round [38] log likelihood: -1962551.996709
EM: Round [39] log likelihood: -1962551.965187
EM: Round [40] log likelihood: -1962551.936156
EM: Round [41] log likelihood: -1962551.909370
EM: Round [42] log likelihood: -1962551.884609
EM: Round [43] log likelihood: -1962551.861682
EM: Round [44] log likelihood: -1962551.840417
EM: Round [45] log likelihood: -1962551.820664
EM: Round [46] log likelihood: -1962551.802289
EM: Round [47] log likelihood: -1962551.785171
EM: Round [48] log likelihood: -1962551.769202
EM: Round [49] log likelihood: -1962551.754287
EM: Round [50] log likelihood: -1962551.740339
EM: Round [51] log likelihood: -1962551.727281
EM: Round [52] log likelihood: -1962551.715041
EM: Round [53] log likelihood: -1962551.703556
EM: Round [54] log likelihood: -1962551.692769
EM: Round [55] log likelihood: -1962551.682628
EM: Round [56] log likelihood: -1962551.673084
EM: Round [57] log likelihood: -1962551.664095
EM: Round [58] log likelihood: -1962551.655621
EM: Round [59] log likelihood: -1962551.647625
EM: Round [60] log likelihood: -1962551.640075
EM: Round [61] log likelihood: -1962551.632941
EM: Round [62] log likelihood: -1962551.626194
EM: Round [63] log likelihood: -1962551.619809
EM: Round [64] log likelihood: -1962551.613763
EM: Round [65] log likelihood: -1962551.608033
EM: Round [66] log likelihood: -1962551.602599
EM: Round [67] log likelihood: -1962551.597444
EM: Round [68] log likelihood: -1962551.592550
EM: Round [69] log likelihood: -1962551.587900
EM: Round [70] log likelihood: -1962551.583482
EM: Round [71] log likelihood: -1962551.579279
EM: Round [72] log likelihood: -1962551.575281
EM: Round [73] log likelihood: -1962551.571475
EM: Round [74] log likelihood: -1962551.567850
EM: Round [75] log likelihood: -1962551.564396
EM: Round [76] log likelihood: -1962551.561104
EM: Round [77] log likelihood: -1962551.557964
EM: Round [78] log likelihood: -1962551.554968
EM: Round [79] log likelihood: -1962551.552109
EM: Round [80] log likelihood: -1962551.549379
EM: Round [81] log likelihood: -1962551.546771
EM: Round [82] log likelihood: -1962551.544279
EM: Round [83] log likelihood: -1962551.541896
EM: Round [84] log likelihood: -1962551.539618
EM: Round [85] log likelihood: -1962551.537439
EM: Round [86] log likelihood: -1962551.535354
EM: Round [87] log likelihood: -1962551.533358
EM: Round [88] log likelihood: -1962551.531447
EM: Round [89] log likelihood: -1962551.529617
EM: Round [90] log likelihood: -1962551.527864
EM: Round [91] log likelihood: -1962551.526183
EM: Round [92] log likelihood: -1962551.524573
EM: Round [93] log likelihood: -1962551.523028
EM: Round [94] log likelihood: -1962551.521547
EM: Round [95] log likelihood: -1962551.520126
EM: Round [96] log likelihood: -1962551.518763
EM: Round [97] log likelihood: -1962551.517454
EM: Round [98] log likelihood: -1962551.516198
EM: Round [99] log likelihood: -1962551.514992
EM: Round [100] log likelihood: -1962551.513834
EM: Round [101] log likelihood: -1962551.512721
EM: Round [102] log likelihood: -1962551.511652
EM: Round [103] log likelihood: -1962551.510625
EM: Round [104] log likelihood: -1962551.509638
EM: Round [105] log likelihood: -1962551.508688
EM: Round [106] log likelihood: -1962551.507776
EM: Round [107] log likelihood: -1962551.506898
EM: Round [108] log likelihood: -1962551.506054
EM: Round [109] log likelihood: -1962551.505242
EM: Round [110] log likelihood: -1962551.504460
EM: Round [111] log likelihood: -1962551.503708
EM: Round [112] log likelihood: -1962551.502985
EM: Round [113] log likelihood: -1962551.502288
EM: Round [114] log likelihood: -1962551.501617
EM: Round [115] log likelihood: -1962551.500972
EM: Round [116] log likelihood: -1962551.500350
EM: Round [117] log likelihood: -1962551.499751
EM: Round [118] log likelihood: -1962551.499173
EM: Round [119] log likelihood: -1962551.498617
EM: Round [120] log likelihood: -1962551.498082
EM: Round [121] log likelihood: -1962551.497566
EM: Round [122] log likelihood: -1962551.497068
EM: Round [123] log likelihood: -1962551.496588
EM: Round [124] log likelihood: -1962551.496126
EM: Round [125] log likelihood: -1962551.495680
EM: Round [126] log likelihood: -1962551.495251
EM: Round [127] log likelihood: -1962551.494836
EM: Round [128] log likelihood: -1962551.494436
EM: Round [129] log likelihood: -1962551.494051
EM: Round [130] log likelihood: -1962551.493679
EM: Round [131] log likelihood: -1962551.493320
EM: Round [132] log likelihood: -1962551.492973
EM: Round [133] log likelihood: -1962551.492639
EM: Round [134] log likelihood: -1962551.492317
EM: Round [135] log likelihood: -1962551.492005
EM: Round [136] log likelihood: -1962551.491705
EM: Round [137] log likelihood: -1962551.491415
EM: Round [138] log likelihood: -1962551.491135
EM: Round [139] log likelihood: -1962551.490864
EM: Round [140] log likelihood: -1962551.490603
EM: Round [141] log likelihood: -1962551.490351
EM: Round [142] log likelihood: -1962551.490107
EM: Round [143] log likelihood: -1962551.489872
EM: Round [144] log likelihood: -1962551.489645
EM: Round [145] log likelihood: -1962551.489425
EM: Round [146] log likelihood: -1962551.489213
EM: Round [147] log likelihood: -1962551.489008
EM: Round [148] log likelihood: -1962551.488809
EM: Round [149] log likelihood: -1962551.488618
EM: Round [150] log likelihood: -1962551.488433
EM: Round [151] log likelihood: -1962551.488254
EM: Round [152] log likelihood: -1962551.488081
EM: Round [153] log likelihood: -1962551.487913
EM: Round [154] log likelihood: -1962551.487752
EM: Round [155] log likelihood: -1962551.487595
EM: Round [156] log likelihood: -1962551.487444
EM: Round [157] log likelihood: -1962551.487297
EM: Round [158] log likelihood: -1962551.487156
EM: Round [159] log likelihood: -1962551.487019
EM: Round [160] log likelihood: -1962551.486886
EM: Round [161] log likelihood: -1962551.486758
EM: Round [162] log likelihood: -1962551.486634
EM: Round [163] log likelihood: -1962551.486514
EM: Round [164] log likelihood: -1962551.486398
EM: Round [165] log likelihood: -1962551.486285
EM: Round [166] log likelihood: -1962551.486176
EM: Round [167] log likelihood: -1962551.486071
EM: Round [168] log likelihood: -1962551.485969
EM: Round [169] log likelihood: -1962551.485870
EM: Stopping iterations at round 169 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 293658735 > /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir > /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir --annotate /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir
-done, see /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1067, filtered: 6289)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [ENSG00000231421.8]
WARNING, no entry stored in dbm for [ENSG00000227681.5]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000230092.7]
WARNING, no entry stored in dbm for [ENSG00000245958.6]
WARNING, no entry stored in dbm for [ENSG00000203413.3]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000265480.5]
WARNING, no entry stored in dbm for [ENSG00000271699.5]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000230559.1]
WARNING, no entry stored in dbm for [ENSG00000288549.1]
WARNING, no entry stored in dbm for [ENSG00000228327.3]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [ENSG00000234769.7]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000241104.5]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000277125.1]
WARNING, no entry stored in dbm for [ENSG00000251314.2]
WARNING, no entry stored in dbm for [ENSG00000272693.4]
WARNING, no entry stored in dbm for [ENSG00000234420.7]
WARNING, no entry stored in dbm for [ENSG00000230131.6]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000225851.1]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000251378.1]
WARNING, no entry stored in dbm for [ENSG00000271018.1]
WARNING, no entry stored in dbm for [ENSG00000224237.1]
WARNING, no entry stored in dbm for [ENSG00000284977.2]
WARNING, no entry stored in dbm for [ENSG00000262801.6]
WARNING, no entry stored in dbm for [ENSG00000214807.2]
WARNING, no entry stored in dbm for [ENSG00000226703.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000213280.2]
WARNING, no entry stored in dbm for [ENSG00000267408.1]
WARNING, no entry stored in dbm for [ENSG00000260905.1]
WARNING, no entry stored in dbm for [ENSG00000266869.2]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000229500.1]
WARNING, no entry stored in dbm for [ENSG00000253154.2]
WARNING, no entry stored in dbm for [ENSG00000262188.2]
WARNING, no entry stored in dbm for [ENSG00000251675.1]
WARNING, no entry stored in dbm for [ENSG00000204622.11]
WARNING, no entry stored in dbm for [ENSG00000235290.1]
WARNING, no entry stored in dbm for [ENSG00000232226.2]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000286912.1]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000242759.8]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000272800.3]
WARNING, no entry stored in dbm for [ENSG00000225594.1]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000260735.2]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000228349.1]
WARNING, no entry stored in dbm for [ENSG00000243538.1]
WARNING, no entry stored in dbm for [ENSG00000237854.3]
WARNING, no entry stored in dbm for [ENSG00000273125.2]
WARNING, no entry stored in dbm for [ENSG00000228262.10]
WARNING, no entry stored in dbm for [ENSG00000153363.13]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000233652.1]
WARNING, no entry stored in dbm for [ENSG00000232226.2]
WARNING, no entry stored in dbm for [ENSG00000254349.6]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000255052.5]
WARNING, no entry stored in dbm for [ENSG00000254016.3]
WARNING, no entry stored in dbm for [ENSG00000285417.1]
WARNING, no entry stored in dbm for [ENSG00000286156.1]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000227619.3]
WARNING, no entry stored in dbm for [ENSG00000228685.1]
WARNING, no entry stored in dbm for [ENSG00000234851.4]
WARNING, no entry stored in dbm for [ENSG00000285424.1]
WARNING, no entry stored in dbm for [ENSG00000286546.1]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000223959.8]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000285062.1]
WARNING, no entry stored in dbm for [ENSG00000285215.2]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000131484.4]
WARNING, no entry stored in dbm for [ENSG00000286935.1]
WARNING, no entry stored in dbm for [ENSG00000259511.3]
WARNING, no entry stored in dbm for [ENSG00000280331.1]
WARNING, no entry stored in dbm for [ENSG00000233862.7]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000266869.2]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000241278.1]
WARNING, no entry stored in dbm for [ENSG00000237004.4]
WARNING, no entry stored in dbm for [ENSG00000237004.4]
WARNING, no entry stored in dbm for [ENSG00000231952.3]
WARNING, no entry stored in dbm for [ENSG00000133624.13]
WARNING, no entry stored in dbm for [ENSG00000268266.1]
WARNING, no entry stored in dbm for [ENSG00000268266.1]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000227671.4]
WARNING, no entry stored in dbm for [ENSG00000235653.1]
WARNING, no entry stored in dbm for [ENSG00000237232.9]
WARNING, no entry stored in dbm for [ENSG00000240622.1]
WARNING, no entry stored in dbm for [ENSG00000285331.2]
WARNING, no entry stored in dbm for [ENSG00000186594.14]
WARNING, no entry stored in dbm for [ENSG00000273192.1]
WARNING, no entry stored in dbm for [ENSG00000287538.1]
WARNING, no entry stored in dbm for [ENSG00000259652.1]
WARNING, no entry stored in dbm for [ENSG00000232554.9]
WARNING, no entry stored in dbm for [ENSG00000259577.2]
WARNING, no entry stored in dbm for [ENSG00000233090.1]
WARNING, no entry stored in dbm for [ENSG00000200434.1]
WARNING, no entry stored in dbm for [ENSG00000279281.1]
WARNING, no entry stored in dbm for [ENSG00000254762.1]
WARNING, no entry stored in dbm for [ENSG00000189136.9]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000277741.4]
WARNING, no entry stored in dbm for [ENSG00000226803.9]
WARNING, no entry stored in dbm for [ENSG00000269416.6]
WARNING, no entry stored in dbm for [ENSG00000226383.7]
WARNING, no entry stored in dbm for [ENSG00000235782.1]
WARNING, no entry stored in dbm for [ENSG00000278866.1]
WARNING, no entry stored in dbm for [ENSG00000240291.1]
WARNING, no entry stored in dbm for [ENSG00000275643.1]
WARNING, no entry stored in dbm for [ENSG00000273658.1]
WARNING, no entry stored in dbm for [ENSG00000224081.9]
WARNING, no entry stored in dbm for [ENSG00000234936.1]
WARNING, no entry stored in dbm for [ENSG00000263669.2]
WARNING, no entry stored in dbm for [ENSG00000223459.6]
WARNING, no entry stored in dbm for [ENSG00000215158.9]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000227101.2]
WARNING, no entry stored in dbm for [ENSG00000260304.1]
WARNING, no entry stored in dbm for [ENSG00000214870.9]
WARNING, no entry stored in dbm for [ENSG00000205482.9]
WARNING, no entry stored in dbm for [ENSG00000260917.1]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000267321.3]
WARNING, no entry stored in dbm for [ENSG00000267321.3]
WARNING, no entry stored in dbm for [ENSG00000248121.8]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000249258.2]
WARNING, no entry stored in dbm for [ENSG00000206341.7]
WARNING, no entry stored in dbm for [ENSG00000274370.1]
WARNING, no entry stored in dbm for [ENSG00000228929.1]
WARNING, no entry stored in dbm for [ENSG00000225750.1]
WARNING, no entry stored in dbm for [ENSG00000283141.1]
WARNING, no entry stored in dbm for [ENSG00000237877.7]
WARNING, no entry stored in dbm for [ENSG00000228878.8]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000283341.2]
WARNING, no entry stored in dbm for [ENSG00000185986.12]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000250159.7]
WARNING, no entry stored in dbm for [ENSG00000225648.5]
WARNING, no entry stored in dbm for [ENSG00000256969.2]
WARNING, no entry stored in dbm for [ENSG00000281641.3]
WARNING, no entry stored in dbm for [ENSG00000182841.12]
WARNING, no entry stored in dbm for [ENSG00000238110.1]
WARNING, no entry stored in dbm for [ENSG00000244378.1]
WARNING, no entry stored in dbm for [ENSG00000214535.3]
WARNING, no entry stored in dbm for [ENSG00000214089.3]
WARNING, no entry stored in dbm for [ENSG00000243696.5]
WARNING, no entry stored in dbm for [ENSG00000242248.2]
WARNING, no entry stored in dbm for [ENSG00000242071.3]
WARNING, no entry stored in dbm for [ENSG00000236801.1]
WARNING, no entry stored in dbm for [ENSG00000244237.1]
WARNING, no entry stored in dbm for [ENSG00000213178.3]
WARNING, no entry stored in dbm for [ENSG00000213700.3]
WARNING, no entry stored in dbm for [ENSG00000240624.1]
WARNING, no entry stored in dbm for [ENSG00000244053.1]
WARNING, no entry stored in dbm for [ENSG00000228754.1]
WARNING, no entry stored in dbm for [ENSG00000241228.1]
WARNING, no entry stored in dbm for [ENSG00000243007.1]
WARNING, no entry stored in dbm for [ENSG00000235590.7]
WARNING, no entry stored in dbm for [ENSG00000236195.1]
WARNING, no entry stored in dbm for [ENSG00000236548.2]
WARNING, no entry stored in dbm for [ENSG00000229956.11]
WARNING, no entry stored in dbm for [ENSG00000255248.9]
WARNING, no entry stored in dbm for [ENSG00000242315.3]
WARNING, no entry stored in dbm for [ENSG00000223299.1]
WARNING, no entry stored in dbm for [ENSG00000268754.4]
WARNING, no entry stored in dbm for [ENSG00000234895.1]
WARNING, no entry stored in dbm for [ENSG00000229419.1]
WARNING, no entry stored in dbm for [ENSG00000196204.12]
WARNING, no entry stored in dbm for [ENSG00000265313.7]
WARNING, no entry stored in dbm for [ENSG00000253799.1]
WARNING, no entry stored in dbm for [ENSG00000228031.4]
WARNING, no entry stored in dbm for [ENSG00000270706.1]
WARNING, no entry stored in dbm for [ENSG00000287984.1]
WARNING, no entry stored in dbm for [ENSG00000124224.17]
WARNING, no entry stored in dbm for [ENSG00000248441.7]
WARNING, no entry stored in dbm for [ENSG00000262429.1]
WARNING, no entry stored in dbm for [ENSG00000270571.2]
WARNING, no entry stored in dbm for [ENSG00000228314.1]
WARNING, no entry stored in dbm for [ENSG00000225724.1]
WARNING, no entry stored in dbm for [ENSG00000280109.3]
WARNING, no entry stored in dbm for [ENSG00000246889.2]
WARNING, no entry stored in dbm for [ENSG00000242622.2]
WARNING, no entry stored in dbm for [ENSG00000265273.1]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000261845.2]
WARNING, no entry stored in dbm for [ENSG00000226416.1]
WARNING, no entry stored in dbm for [ENSG00000236366.3]
WARNING, no entry stored in dbm for [ENSG00000255240.6]
WARNING, no entry stored in dbm for [ENSG00000255875.2]
WARNING, no entry stored in dbm for [ENSG00000269176.2]
WARNING, no entry stored in dbm for [ENSG00000285999.1]
WARNING, no entry stored in dbm for [ENSG00000235831.7]
WARNING, no entry stored in dbm for [ENSG00000260075.1]
WARNING, no entry stored in dbm for [ENSG00000263033.2]
WARNING, no entry stored in dbm for [ENSG00000255213.1]
WARNING, no entry stored in dbm for [ENSG00000237859.2]
WARNING, no entry stored in dbm for [ENSG00000226232.8]
WARNING, no entry stored in dbm for [ENSG00000228549.4]
WARNING, no entry stored in dbm for [ENSG00000232729.8]
WARNING, no entry stored in dbm for [ENSG00000250412.1]
WARNING, no entry stored in dbm for [ENSG00000131484.4]
WARNING, no entry stored in dbm for [ENSG00000243560.3]
WARNING, no entry stored in dbm for [ENSG00000237263.1]
WARNING, no entry stored in dbm for [ENSG00000269904.2]
WARNING, no entry stored in dbm for [ENSG00000255521.2]
WARNING, no entry stored in dbm for [ENSG00000286539.1]
WARNING, no entry stored in dbm for [ENSG00000271404.1]
WARNING, no entry stored in dbm for [ENSG00000267858.6]
WARNING, no entry stored in dbm for [ENSG00000210194.1]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000253200.1]
WARNING, no entry stored in dbm for [ENSG00000254708.1]
WARNING, no entry stored in dbm for [ENSG00000269609.6]
WARNING, no entry stored in dbm for [ENSG00000267532.5]
WARNING, no entry stored in dbm for [ENSG00000257084.1]
WARNING, no entry stored in dbm for [ENSG00000244625.7]
WARNING, no entry stored in dbm for [ENSG00000237609.1]
WARNING, no entry stored in dbm for [ENSG00000234381.1]
WARNING, no entry stored in dbm for [ENSG00000248796.1]
WARNING, no entry stored in dbm for [ENSG00000242326.1]
WARNING, no entry stored in dbm for [ENSG00000178722.13]
WARNING, no entry stored in dbm for [ENSG00000286125.1]
WARNING, no entry stored in dbm for [ENSG00000255856.2]
WARNING, no entry stored in dbm for [ENSG00000277561.5]
WARNING, no entry stored in dbm for [ENSG00000229291.1]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000283196.2]
WARNING, no entry stored in dbm for [ENSG00000258410.1]
WARNING, no entry stored in dbm for [ENSG00000143429.10]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000226419.8]
WARNING, no entry stored in dbm for [ENSG00000228412.9]
WARNING, no entry stored in dbm for [ENSG00000228412.9]
WARNING, no entry stored in dbm for [ENSG00000182366.10]
WARNING, no entry stored in dbm for [ENSG00000273356.1]
WARNING, no entry stored in dbm for [ENSG00000234928.1]
WARNING, no entry stored in dbm for [ENSG00000227755.1]
WARNING, no entry stored in dbm for [ENSG00000218357.3]
WARNING, no entry stored in dbm for [ENSG00000224017.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000267252.6]
WARNING, no entry stored in dbm for [ENSG00000228659.1]
WARNING, no entry stored in dbm for [ENSG00000213250.5]
WARNING, no entry stored in dbm for [ENSG00000204588.5]
WARNING, no entry stored in dbm for [ENSG00000228393.4]
WARNING, no entry stored in dbm for [ENSG00000235314.1]
WARNING, no entry stored in dbm for [ENSG00000225269.3]
WARNING, no entry stored in dbm for [ENSG00000226067.7]
WARNING, no entry stored in dbm for [ENSG00000237854.3]
WARNING, no entry stored in dbm for [ENSG00000250274.2]
WARNING, no entry stored in dbm for [ENSG00000253219.1]
WARNING, no entry stored in dbm for [ENSG00000215807.4]
WARNING, no entry stored in dbm for [ENSG00000226967.1]
WARNING, no entry stored in dbm for [ENSG00000230710.2]
WARNING, no entry stored in dbm for [ENSG00000255229.1]
WARNING, no entry stored in dbm for [ENSG00000203799.13]
WARNING, no entry stored in dbm for [ENSG00000213068.3]
WARNING, no entry stored in dbm for [ENSG00000248968.1]
WARNING, no entry stored in dbm for [ENSG00000249618.6]
WARNING, no entry stored in dbm for [ENSG00000243759.1]
WARNING, no entry stored in dbm for [ENSG00000230198.1]
WARNING, no entry stored in dbm for [ENSG00000237916.1]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000228918.4]
WARNING, no entry stored in dbm for [ENSG00000286675.1]
WARNING, no entry stored in dbm for [ENSG00000273763.2]
WARNING, no entry stored in dbm for [ENSG00000214135.8]
WARNING, no entry stored in dbm for [ENSG00000227733.10]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000275767.1]
WARNING, no entry stored in dbm for [ENSG00000233101.10]
WARNING, no entry stored in dbm for [ENSG00000206228.4]
WARNING, no entry stored in dbm for [ENSG00000213412.3]
WARNING, no entry stored in dbm for [ENSG00000255050.1]
WARNING, no entry stored in dbm for [ENSG00000204622.11]
WARNING, no entry stored in dbm for [ENSG00000233299.1]
WARNING, no entry stored in dbm for [ENSG00000279066.1]
WARNING, no entry stored in dbm for [ENSG00000188388.10]
WARNING, no entry stored in dbm for [ENSG00000228876.4]
WARNING, no entry stored in dbm for [ENSG00000261716.2]
WARNING, no entry stored in dbm for [ENSG00000220323.4]
WARNING, no entry stored in dbm for [ENSG00000181201.3]
WARNING, no entry stored in dbm for [ENSG00000231711.2]
WARNING, no entry stored in dbm for [ENSG00000251451.1]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000277053.4]
WARNING, no entry stored in dbm for [ENSG00000078319.10]
WARNING, no entry stored in dbm for [ENSG00000254454.2]
WARNING, no entry stored in dbm for [ENSG00000103832.10]
WARNING, no entry stored in dbm for [ENSG00000254618.1]
WARNING, no entry stored in dbm for [ENSG00000274615.1]
WARNING, no entry stored in dbm for [ENSG00000250959.2]
WARNING, no entry stored in dbm for [ENSG00000246596.7]
WARNING, no entry stored in dbm for [ENSG00000247982.6]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000160766.14]
WARNING, no entry stored in dbm for [ENSG00000214293.9]
WARNING, no entry stored in dbm for [ENSG00000237264.4]
WARNING, no entry stored in dbm for [ENSG00000253604.1]
WARNING, no entry stored in dbm for [ENSG00000243243.5]
WARNING, no entry stored in dbm for [ENSG00000223652.2]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000241449.6]
WARNING, no entry stored in dbm for [ENSG00000286912.1]
WARNING, no entry stored in dbm for [ENSG00000233117.4]
WARNING, no entry stored in dbm for [ENSG00000234709.2]
WARNING, no entry stored in dbm for [ENSG00000224216.1]
WARNING, no entry stored in dbm for [ENSG00000268869.6]
WARNING, no entry stored in dbm for [ENSG00000273763.2]
WARNING, no entry stored in dbm for [ENSG00000255035.2]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000224963.3]
WARNING, no entry stored in dbm for [ENSG00000244044.3]
WARNING, no entry stored in dbm for [ENSG00000283544.1]
WARNING, no entry stored in dbm for [ENSG00000225728.2]
WARNING, no entry stored in dbm for [ENSG00000231952.3]
WARNING, no entry stored in dbm for [ENSG00000214322.3]
WARNING, no entry stored in dbm for [ENSG00000257556.2]
WARNING, no entry stored in dbm for [ENSG00000260261.2]
WARNING, no entry stored in dbm for [ENSG00000261879.7]
WARNING, no entry stored in dbm for [ENSG00000206896.1]
WARNING, no entry stored in dbm for [ENSG00000257913.2]
WARNING, no entry stored in dbm for [ENSG00000288025.1]
WARNING, no entry stored in dbm for [ENSG00000287463.1]
WARNING, no entry stored in dbm for [ENSG00000251643.1]
WARNING, no entry stored in dbm for [ENSG00000233369.7]
WARNING, no entry stored in dbm for [ENSG00000239653.1]
WARNING, no entry stored in dbm for [ENSG00000260896.6]
WARNING, no entry stored in dbm for [ENSG00000259585.2]
WARNING, no entry stored in dbm for [ENSG00000249917.3]
WARNING, no entry stored in dbm for [ENSG00000247572.8]
WARNING, no entry stored in dbm for [ENSG00000253803.1]
WARNING, no entry stored in dbm for [ENSG00000243389.1]
WARNING, no entry stored in dbm for [ENSG00000217769.4]
WARNING, no entry stored in dbm for [ENSG00000238287.1]
WARNING, no entry stored in dbm for [ENSG00000283458.1]
WARNING, no entry stored in dbm for [ENSG00000215039.7]
WARNING, no entry stored in dbm for [ENSG00000237187.9]
WARNING, no entry stored in dbm for [ENSG00000223745.8]
WARNING, no entry stored in dbm for [ENSG00000154874.15]
WARNING, no entry stored in dbm for [ENSG00000154874.15]
WARNING, no entry stored in dbm for [ENSG00000239521.9]
WARNING, no entry stored in dbm for [ENSG00000227742.2]
WARNING, no entry stored in dbm for [ENSG00000178722.13]
WARNING, no entry stored in dbm for [ENSG00000259933.6]
WARNING, no entry stored in dbm for [ENSG00000279497.1]
WARNING, no entry stored in dbm for [ENSG00000254838.5]
WARNING, no entry stored in dbm for [ENSG00000280424.1]
WARNING, no entry stored in dbm for [ENSG00000216657.1]
WARNING, no entry stored in dbm for [ENSG00000124549.14]
WARNING, no entry stored in dbm for [ENSG00000236626.1]
WARNING, no entry stored in dbm for [ENSG00000239791.2]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000283101.1]
WARNING, no entry stored in dbm for [ENSG00000204177.10]
WARNING, no entry stored in dbm for [ENSG00000279022.1]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000233967.7]
WARNING, no entry stored in dbm for [ENSG00000253837.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000235919.4]
WARNING, no entry stored in dbm for [ENSG00000235919.4]
WARNING, no entry stored in dbm for [ENSG00000271147.8]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000270641.1]
WARNING, no entry stored in dbm for [ENSG00000267136.1]
WARNING, no entry stored in dbm for [ENSG00000255191.1]
WARNING, no entry stored in dbm for [ENSG00000231811.3]
WARNING, no entry stored in dbm for [ENSG00000254632.2]
WARNING, no entry stored in dbm for [ENSG00000255177.2]
WARNING, no entry stored in dbm for [ENSG00000266373.1]
WARNING, no entry stored in dbm for [ENSG00000257086.1]
WARNING, no entry stored in dbm for [ENSG00000179967.11]
WARNING, no entry stored in dbm for [ENSG00000246889.2]
WARNING, no entry stored in dbm for [ENSG00000259516.2]
WARNING, no entry stored in dbm for [ENSG00000223784.2]
WARNING, no entry stored in dbm for [ENSG00000214389.2]
WARNING, no entry stored in dbm for [ENSG00000235085.3]
WARNING, no entry stored in dbm for [ENSG00000270780.1]
WARNING, no entry stored in dbm for [ENSG00000234589.4]
WARNING, no entry stored in dbm for [ENSG00000286537.1]
WARNING, no entry stored in dbm for [ENSG00000227034.1]
WARNING, no entry stored in dbm for [ENSG00000223478.1]
WARNING, no entry stored in dbm for [ENSG00000226403.2]
WARNING, no entry stored in dbm for [ENSG00000270103.3]
WARNING, no entry stored in dbm for [ENSG00000286215.1]
WARNING, no entry stored in dbm for [ENSG00000254473.1]
WARNING, no entry stored in dbm for [ENSG00000247970.2]
WARNING, no entry stored in dbm for [ENSG00000283773.1]
WARNING, no entry stored in dbm for [ENSG00000287449.1]
WARNING, no entry stored in dbm for [ENSG00000287430.1]
WARNING, no entry stored in dbm for [ENSG00000228863.8]
WARNING, no entry stored in dbm for [ENSG00000240401.9]
WARNING, no entry stored in dbm for [ENSG00000235122.4]
WARNING, no entry stored in dbm for [ENSG00000243831.1]
WARNING, no entry stored in dbm for [ENSG00000223653.6]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000274760.1]
WARNING, no entry stored in dbm for [ENSG00000250917.1]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000280011.1]
WARNING, no entry stored in dbm for [ENSG00000286652.1]
WARNING, no entry stored in dbm for [ENSG00000232599.1]
WARNING, no entry stored in dbm for [ENSG00000277053.4]
WARNING, no entry stored in dbm for [ENSG00000255085.8]
WARNING, no entry stored in dbm for [ENSG00000236548.2]
WARNING, no entry stored in dbm for [ENSG00000234667.2]
WARNING, no entry stored in dbm for [ENSG00000260391.2]
WARNING, no entry stored in dbm for [ENSG00000234981.1]
WARNING, no entry stored in dbm for [ENSG00000226448.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000261093.1]
WARNING, no entry stored in dbm for [ENSG00000287905.1]
WARNING, no entry stored in dbm for [ENSG00000235354.1]
WARNING, no entry stored in dbm for [ENSG00000287935.1]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000099725.14]
WARNING, no entry stored in dbm for [ENSG00000255991.2]
WARNING, no entry stored in dbm for [ENSG00000213979.3]
WARNING, no entry stored in dbm for [ENSG00000277332.1]
WARNING, no entry stored in dbm for [ENSG00000230282.1]
WARNING, no entry stored in dbm for [ENSG00000287067.1]
WARNING, no entry stored in dbm for [ENSG00000250159.7]
WARNING, no entry stored in dbm for [ENSG00000229498.1]
WARNING, no entry stored in dbm for [ENSG00000259692.6]
WARNING, no entry stored in dbm for [ENSG00000257178.5]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000284624.1]
WARNING, no entry stored in dbm for [ENSG00000248618.1]
WARNING, no entry stored in dbm for [ENSG00000236773.1]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000288633.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000239969.5]
WARNING, no entry stored in dbm for [ENSG00000249923.1]
WARNING, no entry stored in dbm for [ENSG00000259363.6]
WARNING, no entry stored in dbm for [ENSG00000253107.1]
WARNING, no entry stored in dbm for [ENSG00000253107.1]
WARNING, no entry stored in dbm for [ENSG00000204055.5]
WARNING, no entry stored in dbm for [ENSG00000253107.1]
WARNING, no entry stored in dbm for [ENSG00000204055.5]
WARNING, no entry stored in dbm for [ENSG00000253107.1]
WARNING, no entry stored in dbm for [ENSG00000204055.5]
WARNING, no entry stored in dbm for [ENSG00000265750.1]
WARNING, no entry stored in dbm for [ENSG00000235530.7]
WARNING, no entry stored in dbm for [ENSG00000272693.4]
WARNING, no entry stored in dbm for [ENSG00000227113.2]
WARNING, no entry stored in dbm for [ENSG00000229172.1]
WARNING, no entry stored in dbm for [ENSG00000284663.1]
WARNING, no entry stored in dbm for [ENSG00000284610.1]
WARNING, no entry stored in dbm for [ENSG00000274828.1]
WARNING, no entry stored in dbm for [ENSG00000279421.1]
WARNING, no entry stored in dbm for [ENSG00000287710.1]
WARNING, no entry stored in dbm for [ENSG00000267002.4]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000257386.1]
WARNING, no entry stored in dbm for [ENSG00000287286.1]
WARNING, no entry stored in dbm for [ENSG00000255621.1]
WARNING, no entry stored in dbm for [ENSG00000285600.1]
WARNING, no entry stored in dbm for [ENSG00000213386.3]
WARNING, no entry stored in dbm for [ENSG00000286415.1]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000184319.16]
WARNING, no entry stored in dbm for [ENSG00000288559.1]
WARNING, no entry stored in dbm for [ENSG00000235036.4]
WARNING, no entry stored in dbm for [ENSG00000288535.1]
WARNING, no entry stored in dbm for [ENSG00000280061.1]
WARNING, no entry stored in dbm for [ENSG00000249839.1]
WARNING, no entry stored in dbm for [ENSG00000233539.5]
WARNING, no entry stored in dbm for [ENSG00000225582.2]
WARNING, no entry stored in dbm for [ENSG00000181524.6]
WARNING, no entry stored in dbm for [ENSG00000230355.1]
WARNING, no entry stored in dbm for [ENSG00000216895.9]
WARNING, no entry stored in dbm for [ENSG00000216895.9]
WARNING, no entry stored in dbm for [ENSG00000280416.1]
WARNING, no entry stored in dbm for [ENSG00000249526.1]
WARNING, no entry stored in dbm for [ENSG00000226472.8]
WARNING, no entry stored in dbm for [ENSG00000267498.2]
WARNING, no entry stored in dbm for [ENSG00000287712.1]
WARNING, no entry stored in dbm for [ENSG00000164845.16]
WARNING, no entry stored in dbm for [ENSG00000259005.1]
WARNING, no entry stored in dbm for [ENSG00000267243.6]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000214243.3]
WARNING, no entry stored in dbm for [ENSG00000243554.1]
WARNING, no entry stored in dbm for [ENSG00000272854.1]
WARNING, no entry stored in dbm for [ENSG00000228204.2]
WARNING, no entry stored in dbm for [ENSG00000250522.1]
WARNING, no entry stored in dbm for [ENSG00000224322.2]
WARNING, no entry stored in dbm for [ENSG00000267328.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.Ir91kNnE1W/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)