Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/d3d8587d0c13b786a10becb635d51b/1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2_1.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/e59bfa7c193a2490b8d360549d3266/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/86/d3d8587d0c13b786a10becb635d51b/1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2_2.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c2/e59bfa7c193a2490b8d360549d3266/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/4ae57a790d79b95a1c08daa9f95515/1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction ==> STAGING COMPLETE (6 inputs) -ctat genome lib [/tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.Ir91kNnE1W/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary -sample contains 293658735 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir -J /tmp/nxf.Ir91kNnE1W/1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction -O /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.Ir91kNnE1W/1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction -building interval tree based on /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=66666.67/min [20000], rate=75000.00/min [30000], rate=72000.00/min [40000], rate=75000.00/min [50000], rate=75000.00/min [60000], rate=76595.74/min [70000], rate=77777.78/min [80000], rate=77419.35/min [90000], rate=79411.76/min [100000], rate=80000.00/min [110000], rate=78571.43/min [120000], rate=78260.87/min [130000], rate=78787.88/min [140000], rate=79245.28/min [150000], rate=77586.21/min [160000], rate=78688.52/min [170000], rate=79687.50/min [180000], rate=80597.01/min [190000], rate=81428.57/min [200000], rate=82191.78/min [210000], rate=82894.74/min [220000], rate=83544.30/min [230000], rate=83636.36/min [240000], rate=85207.10/min [250000], rate=85714.29/min [260000], rate=86666.67/min [270000], rate=87096.77/min [280000], rate=85279.19/min [290000], rate=82857.14/min [300000], rate=80357.14/min [310000], rate=77178.42/min [320000], rate=72727.27/min [330000], rate=70714.29/min [340000], rate=68686.87/min [350000], rate=66878.98/min [360000], rate=64864.86/min [370000], rate=63428.57/min [380000], rate=62125.34/min [390000], rate=60937.50/min [400000], rate=59553.35/min [410000], rate=58851.67/min [420000], rate=57534.25/min [430000], rate=55603.45/min [440000], rate=55000.00/min [450000], rate=54216.87/min [460000], rate=53592.23/min [470000], rate=52908.07/min [480000], rate=52459.02/min [490000], rate=51308.90/min [500000], rate=50505.05/min [510000], rate=50081.83/min [520000], rate=49760.77/min [530000], rate=49609.98/min [540000], rate=49465.65/min [550000], rate=49475.26/min [560000], rate=49484.54/min [570000], rate=49279.54/min [580000], rate=49083.22/min [590000], rate=48693.26/min [600000], rate=48583.00/min [610000], rate=48412.70/min [620000], rate=48437.50/min [630000], rate=48399.49/min [640000], rate=48362.72/min [650000], rate=48507.46/min [660000], rate=48351.65/min [670000], rate=48143.71/min [680000], rate=48284.02/min [690000], rate=48308.05/min [700000], rate=48331.42/min [710000], rate=48354.14/min [720000], rate=48430.49/min [730000], rate=48504.98/min [740000], rate=48366.01/min [750000], rate=48283.26/min [760000], rate=48407.64/min [770000], rate=48478.49/min [780000], rate=48347.11/min [790000], rate=48073.02/min [800000], rate=47856.43/min [810000], rate=47600.39/min [820000], rate=47444.55/min [830000], rate=47564.47/min [840000], rate=47727.27/min [850000], rate=47842.40/min [860000], rate=48044.69/min [870000], rate=48199.45/min [880000], rate=48395.97/min [890000], rate=48589.63/min [900000], rate=48736.46/min [910000], rate=48837.21/min [920000], rate=49066.67/min [930000], rate=49249.78/min [940000], rate=49387.04/min [950000], rate=49522.15/min [960000], rate=49740.93/min [970000], rate=49743.59/min [980000], rate=49872.77/min [990000], rate=50084.32/min [1000000], rate=50251.26/min [1010000], rate=50457.95/min [1020000], rate=50620.35/min [1030000], rate=50780.61/min [1040000], rate=50980.39/min [1050000], rate=51136.36/min [1060000], rate=51166.53/min [1070000], rate=51155.38/min [1080000], rate=51144.44/min [1090000], rate=51093.75/min [1100000], rate=51083.59/min [1110000], rate=51073.62/min [1120000], rate=50716.98/min [1130000], rate=50259.45/min [1140000], rate=49817.92/min [1150000], rate=49356.22/min [1160000], rate=49048.63/min [1170000], rate=48988.14/min [1180000], rate=49098.47/min [1190000], rate=49207.44/min [1200000], rate=49281.31/min [1210000], rate=49387.76/min [1220000], rate=49226.63/min [1230000], rate=49036.54/min [1240000], rate=48850.95/min [1250000], rate=48638.13/min [1260000], rate=48492.62/min [1270000], rate=48380.95/min [1280000], rate=48271.53/min [1290000], rate=48194.27/min [1300000], rate=48118.45/min [1310000], rate=48044.01/min [1320000], rate=48087.43/min [1330000], rate=48217.52/min [1340000], rate=48375.45/min [1350000], rate=48532.06/min [1360000], rate=48658.32/min [1370000], rate=48783.38/min [1380000], rate=48907.27/min [1390000], rate=48914.96/min [1400000], rate=48922.54/min [1410000], rate=48958.33/min [1420000], rate=48993.67/min [1430000], rate=49056.60/min [1440000], rate=49202.73/min [1450000], rate=49347.70/min [1460000], rate=49463.58/min [1470000], rate=49578.41/min [1480000], rate=49775.78/min [1490000], rate=50084.03/min [1500000], rate=50420.17/min [1510000], rate=50727.88/min [1520000], rate=50978.20/min [1530000], rate=51142.06/min [1540000], rate=51333.33/min [1550000], rate=51495.02/min [1560000], rate=51627.14/min [1570000], rate=51758.24/min [1580000], rate=51888.34/min [1590000], rate=52045.83/min [1600000], rate=52145.57/min [1610000], rate=52244.46/min [1620000], rate=52314.32/min [1630000], rate=52299.47/min [1640000], rate=52536.04/min [1650000], rate=52659.57/min [1660000], rate=52670.54/min [1670000], rate=52764.61/min [1680000], rate=52774.87/min [1690000], rate=52730.11/min [1700000], rate=52604.44/min [1710000], rate=52642.38/min [1720000], rate=52895.95/min [1730000], rate=53149.00/min [1740000], rate=53401.53/min [1750000], rate=53571.43/min [1760000], rate=53549.70/min [1770000], rate=53609.29/min [1780000], rate=53587.56/min [1790000], rate=53592.81/min [1800000], rate=53624.63/min [1810000], rate=53550.30/min [1820000], rate=53660.93/min [1830000], rate=53744.49/min [1840000], rate=53644.31/min [1850000], rate=53571.43/min [1860000], rate=53473.89/min [1870000], rate=53403.14/min [1880000], rate=53637.66/min [1890000], rate=53795.07/min [1900000], rate=53926.21/min [1910000], rate=54031.12/min [1920000], rate=54186.27/min [1930000], rate=54264.29/min [1940000], rate=54494.38/min [1950000], rate=54749.65/min [1960000], rate=55004.68/min [1970000], rate=55079.22/min [1980000], rate=55230.13/min [1990000], rate=55354.66/min [2000000], rate=55427.25/min [2010000], rate=55524.86/min [2020000], rate=55570.84/min [2030000], rate=55641.85/min [2040000], rate=55737.70/min [2050000], rate=55832.96/min [2060000], rate=55927.60/min [2070000], rate=56021.65/min [2080000], rate=56115.11/min [2090000], rate=56207.98/min [2100000], rate=56275.12/min [2110000], rate=56266.67/min [2120000], rate=56258.29/min [2130000], rate=56274.77/min [2140000], rate=56291.10/min [2150000], rate=56381.12/min [2160000], rate=56421.42/min [2170000], rate=56461.41/min [2180000], rate=56427.96/min [2190000], rate=56443.30/min [2200000], rate=56482.67/min [2210000], rate=56401.53/min [2220000], rate=56321.35/min [2230000], rate=56336.84/min [2240000], rate=56352.20/min [2250000], rate=56390.98/min [2260000], rate=56452.96/min [2270000], rate=56561.46/min [2280000], rate=56599.09/min [2290000], rate=56659.79/min [2300000], rate=56720.10/min [2310000], rate=56733.52/min [2320000], rate=56793.15/min [2330000], rate=56737.01/min [2340000], rate=56612.90/min [2350000], rate=56558.36/min [2360000], rate=56526.95/min [2370000], rate=56608.28/min [2380000], rate=56689.16/min [2390000], rate=56769.60/min [2400000], rate=56827.15/min [2410000], rate=56884.34/min [2420000], rate=56985.87/min [2430000], rate=57042.25/min [2440000], rate=57120.56/min [2450000], rate=57198.44/min [2460000], rate=57275.90/min [2470000], rate=57352.94/min [2480000], rate=57341.04/min [2490000], rate=57153.79/min [2500000], rate=56753.69/min [2510000], rate=56552.76/min [2520000], rate=56375.84/min [2530000], rate=56222.22/min [2540000], rate=56111.93/min [2550000], rate=55982.44/min [2560000], rate=55874.86/min [2570000], rate=55748.37/min [2580000], rate=55603.45/min [2590000], rate=55599.28/min [2600000], rate=55595.15/min [2610000], rate=55257.59/min [2620000], rate=55196.63/min [2630000], rate=55097.77/min [2640000], rate=55019.10/min [2650000], rate=54827.59/min [2660000], rate=54732.51/min [2670000], rate=54526.89/min [2680000], rate=54379.44/min [2690000], rate=54252.10/min [2700000], rate=54180.60/min [2710000], rate=54073.83/min -building interval tree based on /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=75000.00/min [20000], rate=75000.00/min [30000], rate=75000.00/min [40000], rate=72727.27/min [50000], rate=75000.00/min [60000], rate=76595.74/min [70000], rate=77777.78/min [80000], rate=80000.00/min [90000], rate=80597.01/min [100000], rate=81081.08/min [110000], rate=80487.80/min [120000], rate=80898.88/min [130000], rate=81250.00/min [140000], rate=82352.94/min [150000], rate=82568.81/min [160000], rate=83478.26/min [170000], rate=83606.56/min [180000], rate=84375.00/min [190000], rate=85714.29/min [200000], rate=86956.52/min [210000], rate=86896.55/min [220000], rate=87417.22/min [230000], rate=87898.09/min [240000], rate=88343.56/min [250000], rate=88757.40/min [260000], rate=89655.17/min [270000], rate=89502.76/min [280000], rate=89839.57/min [290000], rate=90625.00/min [300000], rate=90000.00/min [310000], rate=87735.85/min [320000], rate=86098.65/min [330000], rate=84255.32/min [340000], rate=81927.71/min [350000], rate=80459.77/min [360000], rate=79411.76/min [370000], rate=78169.01/min [380000], rate=77551.02/min [390000], rate=76221.50/min [400000], rate=75000.00/min [410000], rate=73873.87/min [420000], rate=73469.39/min [430000], rate=72471.91/min [440000], rate=70967.74/min [450000], rate=70312.50/min [460000], rate=69521.41/min [470000], rate=66983.37/min [480000], rate=65753.42/min [490000], rate=64473.68/min [500000], rate=63291.14/min [510000], rate=61943.32/min [520000], rate=61417.32/min [530000], rate=61271.68/min [540000], rate=60560.75/min [550000], rate=60329.07/min [560000], rate=59469.03/min [570000], rate=58762.89/min [580000], rate=58193.98/min [590000], rate=58032.79/min [600000], rate=57877.81/min [610000], rate=57819.91/min [620000], rate=57674.42/min [630000], rate=57099.70/min [640000], rate=56470.59/min [650000], rate=55954.09/min [660000], rate=56011.32/min [670000], rate=56066.95/min [680000], rate=55890.41/min [690000], rate=55945.95/min [700000], rate=56000.00/min [710000], rate=56126.48/min [720000], rate=56323.34/min [730000], rate=56516.13/min [740000], rate=56704.98/min [750000], rate=57106.60/min [760000], rate=57000.00/min [770000], rate=56756.76/min [780000], rate=56590.08/min [790000], rate=56495.83/min [800000], rate=56338.03/min [810000], rate=56184.97/min [820000], rate=56100.34/min [830000], rate=56144.31/min [840000], rate=56000.00/min [850000], rate=55921.05/min [860000], rate=55965.29/min [870000], rate=55948.55/min [880000], rate=55873.02/min [890000], rate=55857.74/min [900000], rate=54655.87/min [910000], rate=53112.84/min [920000], rate=51588.79/min [930000], rate=50225.02/min [940000], rate=49086.16/min [950000], rate=48717.95/min [960000], rate=48689.77/min [970000], rate=48621.55/min [980000], rate=48554.91/min [990000], rate=48410.76/min [1000000], rate=48348.11/min [1010000], rate=47905.14/min [1020000], rate=46788.99/min [1030000], rate=46050.67/min [1040000], rate=46017.70/min [1050000], rate=45985.40/min [1060000], rate=45986.98/min [1070000], rate=45988.54/min [1080000], rate=45990.06/min [1090000], rate=45991.56/min [1100000], rate=45993.03/min [1110000], rate=45962.73/min [1120000], rate=45901.64/min [1130000], rate=45503.36/min [1140000], rate=45029.62/min [1150000], rate=44430.14/min [1160000], rate=44246.66/min [1170000], rate=44290.22/min [1180000], rate=44305.38/min [1190000], rate=44375.39/min [1200000], rate=44417.03/min [1210000], rate=44485.29/min [1220000], rate=44525.55/min [1230000], rate=44619.11/min [1240000], rate=44738.42/min [1250000], rate=44802.87/min [1260000], rate=44866.47/min [1270000], rate=44929.25/min [1280000], rate=44991.21/min [1290000], rate=45000.00/min [1300000], rate=45060.66/min [1310000], rate=45146.47/min [1320000], rate=45128.21/min [1330000], rate=45238.10/min [1340000], rate=45295.77/min [1350000], rate=45302.01/min [1360000], rate=45333.33/min [1370000], rate=45389.29/min [1380000], rate=45494.51/min [1390000], rate=45548.88/min [1400000], rate=45652.17/min [1410000], rate=45729.73/min [1420000], rate=45683.65/min [1430000], rate=45420.86/min [1440000], rate=45235.60/min [1450000], rate=45054.38/min [1460000], rate=44923.08/min [1470000], rate=44771.57/min [1480000], rate=44623.12/min [1490000], rate=44544.10/min [1500000], rate=44466.40/min [1510000], rate=44324.85/min [1520000], rate=44271.84/min [1530000], rate=44305.02/min [1540000], rate=44231.69/min [1550000], rate=44285.71/min [1560000], rate=44402.28/min [1570000], rate=44539.01/min [1580000], rate=44695.90/min [1590000], rate=44788.73/min [1600000], rate=44964.87/min [1610000], rate=45098.04/min [1620000], rate=45251.40/min [1630000], rate=45403.90/min [1640000], rate=45555.56/min [1650000], rate=45685.28/min [1660000], rate=45814.17/min [1670000], rate=45942.23/min [1680000], rate=46069.47/min [1690000], rate=46153.85/min [1700000], rate=46258.50/min [1710000], rate=46362.40/min [1720000], rate=46465.56/min [1730000], rate=46567.97/min [1740000], rate=46648.79/min [1750000], rate=46728.97/min [1760000], rate=46829.27/min [1770000], rate=46887.42/min [1780000], rate=46965.70/min [1790000], rate=47063.98/min [1800000], rate=47161.57/min [1810000], rate=47258.49/min [1820000], rate=47354.73/min [1830000], rate=47450.30/min [1840000], rate=47565.70/min [1850000], rate=47721.41/min [1860000], rate=47855.92/min [1870000], rate=47969.22/min [1880000], rate=48081.84/min [1890000], rate=48193.80/min [1900000], rate=48305.08/min [1910000], rate=48436.18/min [1920000], rate=48587.09/min [1930000], rate=48778.43/min [1940000], rate=48948.70/min [1950000], rate=49077.18/min [1960000], rate=49184.44/min [1970000], rate=49270.53/min [1980000], rate=49315.07/min [1990000], rate=49359.24/min [2000000], rate=49423.39/min [2010000], rate=49548.07/min [2020000], rate=49672.13/min [2030000], rate=49734.59/min [2040000], rate=49715.68/min [2050000], rate=49717.06/min [2060000], rate=49618.63/min [2070000], rate=49620.46/min [2080000], rate=49484.54/min [2090000], rate=49486.98/min [2100000], rate=49411.76/min [2110000], rate=49318.27/min [2120000], rate=49340.57/min [2130000], rate=49286.54/min [2140000], rate=49045.07/min [2150000], rate=48882.15/min [2160000], rate=48905.66/min [2170000], rate=48910.59/min [2180000], rate=48933.78/min [2190000], rate=48993.29/min [2200000], rate=49034.18/min [2210000], rate=49092.93/min [2220000], rate=49151.29/min [2230000], rate=49209.27/min [2240000], rate=49248.81/min [2250000], rate=49324.08/min [2260000], rate=49380.92/min [2270000], rate=49437.39/min [2280000], rate=49493.49/min [2290000], rate=49584.99/min [2300000], rate=49640.29/min [2310000], rate=49713.06/min [2320000], rate=49749.82/min [2330000], rate=49804.06/min [2340000], rate=49893.39/min [2350000], rate=49982.28/min [2360000], rate=50053.02/min [2370000], rate=50141.04/min [2380000], rate=50210.97/min [2390000], rate=50280.50/min [2400000], rate=50367.26/min [2410000], rate=50471.20/min [2420000], rate=50574.71/min [2430000], rate=50713.04/min [2440000], rate=50815.69/min [2450000], rate=50953.21/min [2460000], rate=51037.34/min [2470000], rate=51156.37/min [2480000], rate=51274.98/min [2490000], rate=51375.52/min [2500000], rate=51493.31/min [2510000], rate=51593.01/min [2520000], rate=51727.68/min [2530000], rate=51826.56/min [2540000], rate=51942.74/min [2550000], rate=52040.82/min [2560000], rate=52120.80/min [2570000], rate=52271.19/min [2580000], rate=52350.36/min [2590000], rate=52482.27/min [2600000], rate=52560.65/min [2610000], rate=52656.36/min [2620000], rate=52787.11/min [2630000], rate=52882.04/min [2640000], rate=52994.31/min [2650000], rate=53070.76/min [2660000], rate=53164.56/min [2670000], rate=53257.98/min [2680000], rate=53297.98/min [2690000], rate=53373.02/min [2700000], rate=53430.08/min [2710000], rate=53522.05/min -building interval tree based on /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=100000.00/min [20000], rate=100000.00/min [30000], rate=100000.00/min [40000], rate=92307.69/min [50000], rate=88235.29/min [60000], rate=85714.29/min [70000], rate=85714.29/min [80000], rate=84210.53/min [90000], 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rate=29227.05/min [1220000], rate=29209.90/min [1230000], rate=29227.72/min [1240000], rate=29245.28/min [1250000], rate=29274.00/min [1260000], rate=29200.46/min [1270000], rate=29072.87/min [1280000], rate=28959.28/min [1290000], rate=28837.56/min [1300000], rate=28856.83/min [1310000], rate=28907.69/min [1320000], rate=28905.11/min [1330000], rate=28955.01/min [1340000], rate=29025.27/min [1350000], rate=29094.83/min [1360000], rate=29174.12/min [1370000], rate=29242.26/min [1380000], rate=29257.95/min [1390000], rate=29335.21/min [1400000], rate=29411.76/min [1410000], rate=29477.35/min [1420000], rate=29562.80/min [1430000], rate=29637.31/min [1440000], rate=29721.36/min [1450000], rate=29804.73/min [1460000], rate=29877.22/min [1470000], rate=29949.07/min [1480000], rate=30020.28/min [1490000], rate=30060.52/min [1500000], rate=30130.57/min [1510000], rate=30220.15/min [1520000], rate=30288.94/min [1530000], rate=30347.11/min [1540000], rate=30434.78/min [1550000], rate=30511.81/min [1560000], rate=30588.24/min [1570000], rate=30654.08/min [1580000], rate=30729.34/min [1590000], rate=30813.95/min [1600000], rate=30897.97/min [1610000], rate=30991.34/min [1620000], rate=31094.05/min [1630000], rate=31186.22/min [1640000], rate=31297.71/min [1650000], rate=31398.67/min [1660000], rate=31499.05/min [1670000], rate=31598.86/min [1680000], rate=31708.08/min [1690000], rate=31806.78/min [1700000], rate=31904.91/min [1710000], rate=32012.48/min [1720000], rate=32119.51/min [1730000], rate=32226.02/min [1740000], rate=32331.99/min [1750000], rate=32437.44/min [1760000], rate=32552.40/min [1770000], rate=32656.83/min [1780000], rate=32770.79/min [1790000], rate=32884.26/min [1800000], rate=33007.33/min [1810000], rate=33119.85/min [1820000], rate=33231.89/min [1830000], rate=33343.46/min [1840000], rate=33454.55/min [1850000], rate=33575.32/min [1860000], rate=33695.65/min [1870000], rate=33815.55/min [1880000], rate=33914.61/min [1890000], rate=33972.44/min [1900000], rate=34029.85/min [1910000], rate=34096.99/min [1920000], rate=34173.84/min [1930000], rate=34250.22/min [1940000], rate=34316.04/min [1950000], rate=34391.53/min [1960000], rate=34466.59/min [1970000], rate=34531.11/min [1980000], rate=34605.30/min [1990000], rate=34699.22/min [2000000], rate=34792.69/min [2010000], rate=34875.65/min [2020000], rate=34968.26/min [2030000], rate=35050.36/min [2040000], rate=35142.12/min [2050000], rate=35223.37/min [2060000], rate=35314.29/min [2070000], rate=35404.79/min [2080000], rate=35504.98/min [2090000], rate=35594.66/min [2100000], rate=35694.05/min [2110000], rate=35793.04/min [2120000], rate=35891.65/min [2130000], rate=35989.86/min [2140000], rate=36087.69/min [2150000], rate=36185.13/min [2160000], rate=36282.19/min [2170000], rate=36389.04/min [2180000], rate=36495.54/min [2190000], rate=36601.67/min [2200000], rate=36697.25/min [2210000], rate=36802.66/min [2220000], rate=36907.73/min [2230000], rate=37012.45/min [2240000], rate=37116.82/min [2250000], rate=37220.84/min [2260000], rate=37324.53/min [2270000], rate=37438.15/min [2280000], rate=37541.16/min [2290000], rate=37654.15/min [2300000], rate=37766.83/min [2310000], rate=37868.85/min [2320000], rate=37960.19/min [2330000], rate=37989.13/min [2340000], rate=38017.87/min [2350000], rate=38056.68/min [2360000], rate=38084.99/min [2370000], rate=38113.11/min [2380000], rate=38130.84/min [2390000], rate=38158.59/min [2400000], rate=38186.16/min [2410000], rate=38243.85/min [2420000], rate=38291.14/min [2430000], rate=38338.15/min [2440000], rate=38384.90/min [2450000], rate=38431.37/min [2460000], rate=38477.58/min [2470000], rate=38523.52/min [2480000], rate=38579.21/min [2490000], rate=38624.61/min [2500000], rate=38679.73/min [2510000], rate=38734.57/min [2520000], rate=38789.12/min [2530000], rate=38853.34/min [2540000], rate=38907.33/min [2550000], rate=38970.96/min [2560000], rate=39024.39/min [2570000], rate=39077.55/min [2580000], rate=39130.43/min [2590000], rate=39192.94/min [2600000], rate=39255.16/min [2610000], rate=39317.10/min [2620000], rate=39378.76/min [2630000], rate=39440.14/min [2640000], rate=39520.96/min [2650000], rate=39601.49/min [2660000], rate=39681.75/min [2670000], rate=39761.73/min [2680000], rate=39811.83/min [2690000], rate=n [2720000], rate=45573.86/min [2730000], rate=45664.90/min [2740000], rate=45755.64/min [2750000], rate=45846.07/min [2760000], rate=45936.20/min [2770000], rate=46013.29/min [2780000], rate=46102.82/min [2790000], rate=46192.05/min [2800000], rate=46280.99/min [2810000], rate=46369.64/min [2820000], rate=46457.99/min [2830000], rate=46533.30/min [2840000], rate=46621.07/min [2850000], rate=46772.43/min [2860000], rate=46846.85/min [2870000], rate=46933.77/min [2880000], rate=47033.21/min [2890000], rate=47119.57/min [2900000], rate=47205.64/min [2910000], rate=47304.25/min [2920000], rate=47389.78/min [2930000], rate=47487.84/min [2940000], rate=47534.36/min [2950000], rate=47516.78/min [2960000], rate=47524.75/min [2970000], rate=47532.68/min [2980000], rate=47540.55/min [2990000], rate=47548.37/min [3000000], rate=47568.71/min [3010000], rate=47588.93/min [3020000], rate=47596.53/min [3030000], rate=47616.55/min [3040000], rate=47624.02/min [3050000], rate=47631.44/min [3060000], rate=47638.82/min [3070000], rate=47646.15/min [3080000], rate=47653.43/min [3090000], rate=47672.92/min [3100000], rate=47692.31/min [3110000], rate=47711.58/min [3120000], rate=47730.75/min [3130000], rate=47737.67/min [3140000], rate=47756.65/min [3150000], rate=47775.53/min [3160000], rate=47782.26/min [3170000], rate=47800.96/min [3180000], rate=47819.55/min [3190000], rate=47838.04/min [3200000], rate=47880.30/min [3210000], rate=47898.53/min [3220000], rate=47916.67/min [3230000], rate=47958.43/min [3240000], rate=47988.15/min [3250000], rate=48017.73/min [3260000], rate=48047.16/min [3270000], rate=48076.45/min [3280000], rate=48105.60/min [3290000], rate=48134.60/min [3300000], rate=48163.46/min [3310000], rate=48203.88/min [3320000], rate=48232.45/min [3330000], rate=48272.53/min [3340000], rate=48300.80/min [3350000], rate=48340.55/min [3360000], rate=48380.13/min [3370000], rate=48407.95/min [3380000], rate=48447.20/min [3390000], rate=48486.29/min [3400000], rate=48513.67/min [3410000], rate=48552.44/min [3420000], rate=48602.56/min [3430000], rate=48663.99/min [3440000], rate=48713.71/min [3450000], rate=48763.25/min [3460000], rate=48824.08/min [3470000], rate=48873.24/min [3480000], rate=48922.21/min [3490000], rate=48971.00/min [3500000], rate=49031.05/min [3510000], rate=49079.47/min [3520000], rate=49127.70/min [3530000], rate=49187.18/min [3540000], rate=49246.46/min [3550000], rate=49294.14/min [3560000], rate=49353.05/min [3570000], rate=49411.76/min [3580000], rate=49470.29/min [3590000], rate=49528.63/min [3600000], rate=49586.78/min [3610000], rate=49656.12/min [3620000], rate=49713.89/min [3630000], rate=49771.48/min [3640000], rate=49840.26/min [3650000], rate=49908.84/min [3660000], rate=49965.87/min [3670000], rate=50034.08/min 39871.54/min [2700000], rate=39940.83/min [2710000], rate=40000.00/min [2720000], rate=40058.91/min [2730000], rate=40127.39/min [2740000], rate=40185.77/min [2750000], rate=40253.72/min [2760000], rate=40331.22/min [2770000], rate=40388.82/min [2780000], rate=40455.98/min [2790000], rate=40532.69/min [2800000], rate=40599.32/min [2810000], rate=40665.70/min [2820000], rate=40731.82/min [2830000], rate=40807.50/min [2840000], rate=40873.11/min [2850000], rate=40958.08/min [2860000], rate=41033.00/min [2870000], rate=41107.66/min [2880000], rate=41182.08/min [2890000], rate=41266.06/min [2900000], rate=41339.99/min [2910000], rate=41433.32/min [2920000], rate=41526.43/min [2930000], rate=41609.47/min [2940000], rate=41702.13/min [2950000], rate=41794.57/min [2960000], rate=41896.67/min [2970000], rate=41988.69/min [2980000], rate=42080.49/min [2990000], rate=42172.07/min [3000000], rate=42263.44/min [3010000], rate=42354.60/min [3020000], rate=42445.54/min [3030000], rate=42546.22/min [3040000], rate=42636.75/min [3050000], rate=42737.04/min [3060000], rate=42787.23/min [3070000], rate=42817.29/min [3080000], rate=42857.14/min [3090000], rate=42886.88/min [3100000], rate=42906.57/min [3110000], rate=42936.03/min [3120000], rate=42975.21/min [3130000], rate=43014.20/min [3140000], rate=43072.70/min [3150000], rate=43111.31/min [3160000], rate=43159.57/min [3170000], rate=43207.63/min [3180000], rate=43255.50/min [3190000], rate=43293.37/min [3200000], rate=43350.64/min [3210000], rate=43407.71/min [3220000], rate=43454.79/min [3230000], rate=43501.68/min [3240000], rate=43558.14/min [3250000], rate=43614.40/min [3260000], rate=43660.71/min [3270000], rate=43706.84/min [3280000], rate=43762.51/min [3290000], rate=43817.98/min [3300000], rate=43873.26/min [3310000], rate=43928.33/min [3320000], rate=43973.51/min [3330000], rate=44028.21/min [3340000], rate=44082.71/min [3350000], rate=44127.33/min [3360000], rate=44181.46/min [3370000], rate=44235.40/min [3380000], rate=44289.15/min [3390000], rate=44342.71/min [3400000], rate=44386.42/min [3410000], rate=44439.62/min [3420000], rate=44482.98/min [3430000], rate=44545.45/min [3440000], rate=44627.03/min [3450000], rate=44689.12/min [3460000], rate=44751.02/min [3470000], rate=44812.74/min [3480000], rate=44883.92/min [3490000], rate=44954.92/min [3500000], rate=45025.73/min [3510000], rate=45096.36/min [3520000], rate=45176.47/min [3530000], rate=45246.74/min [3540000], rate=45316.83/min [3550000], rate=45396.42/min [3560000], rate=45466.16/min [3570000], rate=45555.08/min [3580000], rate=45634.16/min [3590000], rate=45703.37/min [3600000], rate=45782.11/min [3610000], rate=45850.97/min [3620000], rate=45929.37/min [3630000], rate=45997.89/min [3640000], rate=46075.95/min [3650000], rate=46163.58/min [3660000], rate=46260.80/min [3670000], rate=46338.38/min [3680000], rate=46425.57/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir --filt_file /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 12000000.00 reads per min processed... 18000000.00 reads per min processed... 12000000.00 reads per min processed... 15000000.00 reads per min processed... 18000000.00 reads per min processed... 10500000.00 reads per min processed... 9600000.00 reads per min processed... 7714285.71 reads per min processed... 7500000.00 reads per min processed... 7333333.33 reads per min processed... 6545454.55 reads per min processed... 6500000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 5666666.67 reads per min processed... 5684210.53 reads per min processed... 5700000.00 reads per min processed... 5454545.45 reads per min processed... 5478260.87 reads per min processed... 5500000.00 reads per min processed... 5307692.31 reads per min processed... 5333333.33 reads per min processed... 5357142.86 reads per min processed... 5200000.00 reads per min processed... 5225806.45 reads per min processed... 5250000.00 reads per min processed... 5117647.06 reads per min processed... 5142857.14 reads per min processed... 5027027.03 reads per min processed... 5052631.58 reads per min processed... 5076923.08 reads per min processed... 4975609.76 reads per min processed... 5000000.00 reads per min processed... 4909090.91 reads per min processed... 4933333.33 reads per min processed... 4956521.74 reads per min processed... 4875000.00 reads per min processed... 4897959.18 reads per min processed... 4920000.00 reads per min processed... 4846153.85 reads per min processed... 4867924.53 reads per min processed... 4888888.89 reads per min processed... 4909090.91 reads per min processed... 4928571.43 reads per min processed... 4947368.42 reads per min processed... 4881355.93 reads per min processed... 4900000.00 reads per min processed... 4918032.79 reads per min processed... 4935483.87 reads per min processed... 4875000.00 reads per min processed... 4892307.69 reads per min processed... 4909090.91 reads per min processed... 4852941.18 reads per min processed... 4869565.22 reads per min processed... 4885714.29 reads per min processed... 4901408.45 reads per min processed... 4849315.07 reads per min processed... 4864864.86 reads per min processed... 4880000.00 reads per min processed... 4894736.84 reads per min processed... 4909090.91 reads per min processed... 4923076.92 reads per min processed... 5000000.00 reads per min processed... 5076923.08 reads per min processed... 5088607.59 reads per min processed... 5100000.00 reads per min processed... 5111111.11 reads per min processed... 5121951.22 reads per min processed... 5132530.12 reads per min processed... 5082352.94 reads per min processed... 5093023.26 reads per min processed... 5103448.28 reads per min processed... 5056179.78 reads per min processed... 5066666.67 reads per min processed... 5076923.08 reads per min processed... 5086956.52 reads per min processed... 5096774.19 reads per min processed... 5052631.58 reads per min processed... 5062500.00 reads per min processed... 5072164.95 reads per min processed... 5030303.03 reads per min processed... 5040000.00 reads per min processed... 5049504.95 reads per min processed... 5058823.53 reads per min processed... 5067961.17 reads per min processed... 5028571.43 reads per min processed... 5037735.85 reads per min processed... 5046728.97 reads per min processed... 5055555.56 reads per min processed... 5018181.82 reads per min processed... 5027027.03 reads per min processed... 5035714.29 reads per min processed... 5044247.79 reads per min processed... 5052631.58 reads per min processed... 5060869.57 reads per min processed... 5025641.03 reads per min processed... 5033898.31 reads per min processed... 5042016.81 reads per min processed... 5050000.00 reads per min processed... 5057851.24 reads per min processed... 5024390.24 reads per min processed... 5032258.06 reads per min processed... 5040000.00 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.Ir91kNnE1W/1173_CRX_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -1965260.427835 EM: Round [1] log likelihood: -1964779.762501 EM: Round [2] log likelihood: -1964611.136563 EM: Round [3] log likelihood: -1964532.670969 EM: Round [4] log likelihood: -1964490.821666 EM: Round [5] log likelihood: -1964466.579824 EM: Round [6] log likelihood: -1964451.637348 EM: Round [7] log likelihood: -1964441.917890 EM: Round [8] log likelihood: -1964435.284158 EM: Round [9] log likelihood: -1964430.560918 EM: Round [10] log likelihood: -1964427.073669 EM: Round [11] log likelihood: -1964424.418869 EM: Round [12] log likelihood: -1964422.345257 EM: Round [13] log likelihood: -1964420.690463 EM: Round [14] log likelihood: -1964419.345947 EM: Round [15] log likelihood: -1964418.236892 EM: Round [16] log likelihood: -1964417.310286 EM: Round [17] log likelihood: -1964416.527618 EM: Round [18] log likelihood: -1964415.860282 EM: Round [19] log likelihood: -1964415.286601 EM: Round [20] log likelihood: -1964414.789861 EM: Round [21] log likelihood: -1964414.356975 EM: Round [22] log likelihood: -1964413.977556 EM: Round [23] log likelihood: -1964413.643265 EM: Round [24] log likelihood: -1964413.347336 EM: Round [25] log likelihood: -1964413.084229 EM: Round [26] log likelihood: -1964412.849372 EM: Round [27] log likelihood: -1964412.638959 EM: Round [28] log likelihood: -1964412.449805 EM: Round [29] log likelihood: -1964412.279226 EM: Round [30] log likelihood: -1964412.124945 EM: Round [31] log likelihood: -1964411.985024 EM: Round [32] log likelihood: -1964411.857802 EM: Round [33] log likelihood: -1964411.741849 EM: Round [34] log likelihood: -1964411.635929 EM: Round [35] log likelihood: -1964411.538970 EM: Round [36] log likelihood: -1964411.450037 EM: Round [37] log likelihood: -1964411.368314 EM: Round [38] log likelihood: -1964411.293083 EM: Round [39] log likelihood: -1964411.223711 EM: Round [40] log likelihood: -1964411.159641 EM: Round [41] log likelihood: -1964411.100379 EM: Round [42] log likelihood: -1964411.045486 EM: Round [43] log likelihood: -1964410.994569 EM: Round [44] log likelihood: -1964410.947281 EM: Round [45] log likelihood: -1964410.903307 EM: Round [46] log likelihood: -1964410.862367 EM: Round [47] log likelihood: -1964410.824210 EM: Round [48] log likelihood: -1964410.788607 EM: Round [49] log likelihood: -1964410.755353 EM: Round [50] log likelihood: -1964410.724262 EM: Round [51] log likelihood: -1964410.695166 EM: Round [52] log likelihood: -1964410.667912 EM: Round [53] log likelihood: -1964410.642362 EM: Round [54] log likelihood: -1964410.618387 EM: Round [55] log likelihood: -1964410.595874 EM: Round [56] log likelihood: -1964410.574716 EM: Round [57] log likelihood: -1964410.554817 EM: Round [58] log likelihood: -1964410.536088 EM: Round [59] log likelihood: -1964410.518448 EM: Round [60] log likelihood: -1964410.501823 EM: Round [61] log likelihood: -1964410.486143 EM: Round [62] log likelihood: -1964410.471347 EM: Round [63] log likelihood: -1964410.457375 EM: Round [64] log likelihood: -1964410.444173 EM: Round [65] log likelihood: -1964410.431693 EM: Round [66] log likelihood: -1964410.419888 EM: Round [67] log likelihood: -1964410.408716 EM: Round [68] log likelihood: -1964410.398137 EM: Round [69] log likelihood: -1964410.388114 EM: Round [70] log likelihood: -1964410.378615 EM: Round [71] log likelihood: -1964410.369606 EM: Round [72] log likelihood: -1964410.361060 EM: Round [73] log likelihood: -1964410.352948 EM: Round [74] log likelihood: -1964410.345245 EM: Round [75] log likelihood: -1964410.337928 EM: Round [76] log likelihood: -1964410.330973 EM: Round [77] log likelihood: -1964410.324362 EM: Round [78] log likelihood: -1964410.318074 EM: Round [79] log likelihood: -1964410.312091 EM: Round [80] log likelihood: -1964410.306396 EM: Round [81] log likelihood: -1964410.300974 EM: Round [82] log likelihood: -1964410.295809 EM: Round [83] log likelihood: -1964410.290888 EM: Round [84] log likelihood: -1964410.286198 EM: Round [85] log likelihood: -1964410.281727 EM: Round [86] log likelihood: -1964410.277462 EM: Round [87] log likelihood: -1964410.273394 EM: Round [88] log likelihood: -1964410.269511 EM: Round [89] log likelihood: -1964410.265805 EM: Round [90] log likelihood: -1964410.262266 EM: Round [91] log likelihood: -1964410.258886 EM: Round [92] log likelihood: -1964410.255658 EM: Round [93] log likelihood: -1964410.252572 EM: Round [94] log likelihood: -1964410.249623 EM: Round [95] log likelihood: -1964410.246803 EM: Round [96] log likelihood: -1964410.244106 EM: Round [97] log likelihood: -1964410.241527 EM: Round [98] log likelihood: -1964410.239059 EM: Round [99] log likelihood: -1964410.236697 EM: Round [100] log likelihood: -1964410.234437 EM: Round [101] log likelihood: -1964410.232273 EM: Round [102] log likelihood: -1964410.230200 EM: Round [103] log likelihood: -1964410.228215 EM: Round [104] log likelihood: -1964410.226313 EM: Round [105] log likelihood: -1964410.224491 EM: Round [106] log likelihood: -1964410.222745 EM: Round [107] log likelihood: -1964410.221071 EM: Round [108] log likelihood: -1964410.219466 EM: Round [109] log likelihood: -1964410.217927 EM: Round [110] log likelihood: -1964410.216451 EM: Round [111] log likelihood: -1964410.215035 EM: Round [112] log likelihood: -1964410.213677 EM: Round [113] log likelihood: -1964410.212373 EM: Round [114] log likelihood: -1964410.211122 EM: Round [115] log likelihood: -1964410.209921 EM: Round [116] log likelihood: -1964410.208769 EM: Round [117] log likelihood: -1964410.207662 EM: Round [118] log likelihood: -1964410.206598 EM: Round [119] log likelihood: -1964410.205577 EM: Round [120] log likelihood: -1964410.204596 EM: Round [121] log likelihood: -1964410.203654 EM: Round [122] log likelihood: -1964410.202748 EM: Round [123] log likelihood: -1964410.201878 EM: Round [124] log likelihood: -1964410.201041 EM: Round [125] log likelihood: -1964410.200236 EM: Round [126] log likelihood: -1964410.199463 EM: Round [127] log likelihood: -1964410.198719 EM: Round [128] log likelihood: -1964410.198004 EM: Round [129] log likelihood: -1964410.197316 EM: Round [130] log likelihood: -1964410.196654 EM: Round [131] log likelihood: -1964410.196017 EM: Round [132] log likelihood: -1964410.195404 EM: Round [133] log likelihood: -1964410.194814 EM: Round [134] log likelihood: -1964410.194247 EM: Round [135] log likelihood: -1964410.193700 EM: Round [136] log likelihood: -1964410.193174 EM: Round [137] log likelihood: -1964410.192667 EM: Round [138] log likelihood: -1964410.192179 EM: Round [139] log likelihood: -1964410.191710 EM: Round [140] log likelihood: -1964410.191257 EM: Round [141] log likelihood: -1964410.190821 EM: Round [142] log likelihood: -1964410.190401 EM: Round [143] log likelihood: -1964410.189996 EM: Round [144] log likelihood: -1964410.189605 EM: Round [145] log likelihood: -1964410.189229 EM: Round [146] log likelihood: -1964410.188867 EM: Round [147] log likelihood: -1964410.188517 EM: Round [148] log likelihood: -1964410.188180 EM: Round [149] log likelihood: -1964410.187855 EM: Round [150] log likelihood: -1964410.187542 EM: Round [151] log likelihood: -1964410.187239 EM: Round [152] log likelihood: -1964410.186948 EM: Round [153] log likelihood: -1964410.186666 EM: Round [154] log likelihood: -1964410.186395 EM: Round [155] log likelihood: -1964410.186133 EM: Round [156] log likelihood: -1964410.185880 EM: Round [157] log likelihood: -1964410.185636 EM: Round [158] log likelihood: -1964410.185400 EM: Round [159] log likelihood: -1964410.185173 EM: Round [160] log likelihood: -1964410.184953 EM: Round [161] log likelihood: -1964410.184741 EM: Round [162] log likelihood: -1964410.184536 EM: Round [163] log likelihood: -1964410.184338 EM: Round [164] log likelihood: -1964410.184147 EM: Round [165] log likelihood: -1964410.183962 EM: Round [166] log likelihood: -1964410.183783 EM: Round [167] log likelihood: -1964410.183611 EM: Round [168] log likelihood: -1964410.183444 EM: Round [169] log likelihood: -1964410.183283 EM: Round [170] log likelihood: -1964410.183127 EM: Round [171] log likelihood: -1964410.182977 EM: Round [172] log likelihood: -1964410.182831 EM: Round [173] log likelihood: -1964410.182690 EM: Round [174] log likelihood: -1964410.182554 EM: Round [175] log likelihood: -1964410.182422 EM: Round [176] log likelihood: -1964410.182294 EM: Round [177] log likelihood: -1964410.182171 EM: Round [178] log likelihood: -1964410.182052 EM: Round [179] log likelihood: -1964410.181936 EM: Round [180] log likelihood: -1964410.181824 EM: Round [181] log likelihood: -1964410.181716 EM: Round [182] log likelihood: -1964410.181611 EM: Round [183] log likelihood: -1964410.181510 EM: Round [184] log likelihood: -1964410.181411 EM: Stopping iterations at round 184 due to insufficient improvement in likelihood. EM: Starting log likelihood: -1963245.736939 EM: Round [1] log likelihood: -1962842.606548 EM: Round [2] log likelihood: -1962705.201610 EM: Round [3] log likelihood: -1962642.221833 EM: Round [4] log likelihood: -1962609.130717 EM: Round [5] log likelihood: -1962590.310039 EM: Round [6] log likelihood: -1962578.958614 EM: Round [7] log likelihood: -1962571.754992 EM: Round [8] log likelihood: -1962566.969083 EM: Round [9] log likelihood: -1962563.656951 EM: Round [10] log likelihood: -1962561.281578 EM: Round [11] log likelihood: -1962559.524837 EM: Round [12] log likelihood: -1962558.190882 EM: Round [13] log likelihood: -1962557.154796 EM: Round [14] log likelihood: -1962556.334316 EM: Round [15] log likelihood: -1962555.673678 EM: Round [16] log likelihood: -1962555.134084 EM: Round [17] log likelihood: -1962554.687877 EM: Round [18] log likelihood: -1962554.314909 EM: Round [19] log likelihood: -1962554.000203 EM: Round [20] log likelihood: -1962553.732428 EM: Round [21] log likelihood: -1962553.502868 EM: Round [22] log likelihood: -1962553.304732 EM: Round [23] log likelihood: -1962553.132656 EM: Round [24] log likelihood: -1962552.982363 EM: Round [25] log likelihood: -1962552.850405 EM: Round [26] log likelihood: -1962552.733983 EM: Round [27] log likelihood: -1962552.630801 EM: Round [28] log likelihood: -1962552.538970 EM: Round [29] log likelihood: -1962552.456918 EM: Round [30] log likelihood: -1962552.383334 EM: Round [31] log likelihood: -1962552.317116 EM: Round [32] log likelihood: -1962552.257334 EM: Round [33] log likelihood: -1962552.203199 EM: Round [34] log likelihood: -1962552.154036 EM: Round [35] log likelihood: -1962552.109270 EM: Round [36] log likelihood: -1962552.068403 EM: Round [37] log likelihood: -1962552.031007 EM: Round [38] log likelihood: -1962551.996709 EM: Round [39] log likelihood: -1962551.965187 EM: Round [40] log likelihood: -1962551.936156 EM: Round [41] log likelihood: -1962551.909370 EM: Round [42] log likelihood: -1962551.884609 EM: Round [43] log likelihood: -1962551.861682 EM: Round [44] log likelihood: -1962551.840417 EM: Round [45] log likelihood: -1962551.820664 EM: Round [46] log likelihood: -1962551.802289 EM: Round [47] log likelihood: -1962551.785171 EM: Round [48] log likelihood: -1962551.769202 EM: Round [49] log likelihood: -1962551.754287 EM: Round [50] log likelihood: -1962551.740339 EM: Round [51] log likelihood: -1962551.727281 EM: Round [52] log likelihood: -1962551.715041 EM: Round [53] log likelihood: -1962551.703556 EM: Round [54] log likelihood: -1962551.692769 EM: Round [55] log likelihood: -1962551.682628 EM: Round [56] log likelihood: -1962551.673084 EM: Round [57] log likelihood: -1962551.664095 EM: Round [58] log likelihood: -1962551.655621 EM: Round [59] log likelihood: -1962551.647625 EM: Round [60] log likelihood: -1962551.640075 EM: Round [61] log likelihood: -1962551.632941 EM: Round [62] log likelihood: -1962551.626194 EM: Round [63] log likelihood: -1962551.619809 EM: Round [64] log likelihood: -1962551.613763 EM: Round [65] log likelihood: -1962551.608033 EM: Round [66] log likelihood: -1962551.602599 EM: Round [67] log likelihood: -1962551.597444 EM: Round [68] log likelihood: -1962551.592550 EM: Round [69] log likelihood: -1962551.587900 EM: Round [70] log likelihood: -1962551.583482 EM: Round [71] log likelihood: -1962551.579279 EM: Round [72] log likelihood: -1962551.575281 EM: Round [73] log likelihood: -1962551.571475 EM: Round [74] log likelihood: -1962551.567850 EM: Round [75] log likelihood: -1962551.564396 EM: Round [76] log likelihood: -1962551.561104 EM: Round [77] log likelihood: -1962551.557964 EM: Round [78] log likelihood: -1962551.554968 EM: Round [79] log likelihood: -1962551.552109 EM: Round [80] log likelihood: -1962551.549379 EM: Round [81] log likelihood: -1962551.546771 EM: Round [82] log likelihood: -1962551.544279 EM: Round [83] log likelihood: -1962551.541896 EM: Round [84] log likelihood: -1962551.539618 EM: Round [85] log likelihood: -1962551.537439 EM: Round [86] log likelihood: -1962551.535354 EM: Round [87] log likelihood: -1962551.533358 EM: Round [88] log likelihood: -1962551.531447 EM: Round [89] log likelihood: -1962551.529617 EM: Round [90] log likelihood: -1962551.527864 EM: Round [91] log likelihood: -1962551.526183 EM: Round [92] log likelihood: -1962551.524573 EM: Round [93] log likelihood: -1962551.523028 EM: Round [94] log likelihood: -1962551.521547 EM: Round [95] log likelihood: -1962551.520126 EM: Round [96] log likelihood: -1962551.518763 EM: Round [97] log likelihood: -1962551.517454 EM: Round [98] log likelihood: -1962551.516198 EM: Round [99] log likelihood: -1962551.514992 EM: Round [100] log likelihood: -1962551.513834 EM: Round [101] log likelihood: -1962551.512721 EM: Round [102] log likelihood: -1962551.511652 EM: Round [103] log likelihood: -1962551.510625 EM: Round [104] log likelihood: -1962551.509638 EM: Round [105] log likelihood: -1962551.508688 EM: Round [106] log likelihood: -1962551.507776 EM: Round [107] log likelihood: -1962551.506898 EM: Round [108] log likelihood: -1962551.506054 EM: Round [109] log likelihood: -1962551.505242 EM: Round [110] log likelihood: -1962551.504460 EM: Round [111] log likelihood: -1962551.503708 EM: Round [112] log likelihood: -1962551.502985 EM: Round [113] log likelihood: -1962551.502288 EM: Round [114] log likelihood: -1962551.501617 EM: Round [115] log likelihood: -1962551.500972 EM: Round [116] log likelihood: -1962551.500350 EM: Round [117] log likelihood: -1962551.499751 EM: Round [118] log likelihood: -1962551.499173 EM: Round [119] log likelihood: -1962551.498617 EM: Round [120] log likelihood: -1962551.498082 EM: Round [121] log likelihood: -1962551.497566 EM: Round [122] log likelihood: -1962551.497068 EM: Round [123] log likelihood: -1962551.496588 EM: Round [124] log likelihood: -1962551.496126 EM: Round [125] log likelihood: -1962551.495680 EM: Round [126] log likelihood: -1962551.495251 EM: Round [127] log likelihood: -1962551.494836 EM: Round [128] log likelihood: -1962551.494436 EM: Round [129] log likelihood: -1962551.494051 EM: Round [130] log likelihood: -1962551.493679 EM: Round [131] log likelihood: -1962551.493320 EM: Round [132] log likelihood: -1962551.492973 EM: Round [133] log likelihood: -1962551.492639 EM: Round [134] log likelihood: -1962551.492317 EM: Round [135] log likelihood: -1962551.492005 EM: Round [136] log likelihood: -1962551.491705 EM: Round [137] log likelihood: -1962551.491415 EM: Round [138] log likelihood: -1962551.491135 EM: Round [139] log likelihood: -1962551.490864 EM: Round [140] log likelihood: -1962551.490603 EM: Round [141] log likelihood: -1962551.490351 EM: Round [142] log likelihood: -1962551.490107 EM: Round [143] log likelihood: -1962551.489872 EM: Round [144] log likelihood: -1962551.489645 EM: Round [145] log likelihood: -1962551.489425 EM: Round [146] log likelihood: -1962551.489213 EM: Round [147] log likelihood: -1962551.489008 EM: Round [148] log likelihood: -1962551.488809 EM: Round [149] log likelihood: -1962551.488618 EM: Round [150] log likelihood: -1962551.488433 EM: Round [151] log likelihood: -1962551.488254 EM: Round [152] log likelihood: -1962551.488081 EM: Round [153] log likelihood: -1962551.487913 EM: Round [154] log likelihood: -1962551.487752 EM: Round [155] log likelihood: -1962551.487595 EM: Round [156] log likelihood: -1962551.487444 EM: Round [157] log likelihood: -1962551.487297 EM: Round [158] log likelihood: -1962551.487156 EM: Round [159] log likelihood: -1962551.487019 EM: Round [160] log likelihood: -1962551.486886 EM: Round [161] log likelihood: -1962551.486758 EM: Round [162] log likelihood: -1962551.486634 EM: Round [163] log likelihood: -1962551.486514 EM: Round [164] log likelihood: -1962551.486398 EM: Round [165] log likelihood: -1962551.486285 EM: Round [166] log likelihood: -1962551.486176 EM: Round [167] log likelihood: -1962551.486071 EM: Round [168] log likelihood: -1962551.485969 EM: Round [169] log likelihood: -1962551.485870 EM: Stopping iterations at round 169 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 293658735 > /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir > /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir --annotate /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir -done, see /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 1067, filtered: 6289) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.Ir91kNnE1W/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.Ir91kNnE1W/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000231421.8] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000230092.7] WARNING, no entry stored in dbm for [ENSG00000245958.6] WARNING, no entry stored in dbm for [ENSG00000203413.3] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000265480.5] WARNING, no entry stored in dbm for [ENSG00000271699.5] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000288549.1] WARNING, no entry stored in dbm for [ENSG00000228327.3] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000234769.7] WARNING, no entry stored in dbm for [ENSG00000265018.6] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000241104.5] WARNING, no entry stored in dbm for [ENSG00000257252.6] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000251314.2] WARNING, no entry stored in dbm for [ENSG00000272693.4] WARNING, no entry stored in dbm for [ENSG00000234420.7] WARNING, no entry stored in dbm for [ENSG00000230131.6] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000225851.1] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000251378.1] WARNING, no entry stored in dbm for [ENSG00000271018.1] WARNING, no entry stored in dbm for [ENSG00000224237.1] WARNING, no entry stored in dbm for [ENSG00000284977.2] WARNING, no entry stored in dbm for [ENSG00000262801.6] WARNING, no entry stored in dbm for [ENSG00000214807.2] WARNING, no entry stored in dbm for [ENSG00000226703.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000214433.4] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000213280.2] WARNING, no entry stored in dbm for [ENSG00000267408.1] WARNING, no entry stored in dbm for [ENSG00000260905.1] WARNING, no entry stored in dbm for [ENSG00000266869.2] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000229500.1] WARNING, no entry stored in dbm for [ENSG00000253154.2] WARNING, no entry stored in dbm for [ENSG00000262188.2] WARNING, no entry stored in dbm for [ENSG00000251675.1] WARNING, no entry stored in dbm for [ENSG00000204622.11] WARNING, no entry stored in dbm for [ENSG00000235290.1] WARNING, no entry stored in dbm for [ENSG00000232226.2] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000286912.1] WARNING, no entry stored in dbm for [ENSG00000284648.1] WARNING, no entry stored in dbm for [ENSG00000242759.8] WARNING, no entry stored in dbm for [ENSG00000265936.1] WARNING, no entry stored in dbm for [ENSG00000214259.3] WARNING, no entry stored in dbm for [ENSG00000272800.3] WARNING, no entry stored in dbm for [ENSG00000225594.1] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000260735.2] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000228349.1] WARNING, no entry stored in dbm for [ENSG00000243538.1] WARNING, no entry stored in dbm for [ENSG00000237854.3] WARNING, no entry stored in dbm for [ENSG00000273125.2] WARNING, no entry stored in dbm for [ENSG00000228262.10] WARNING, no entry stored in dbm for [ENSG00000153363.13] WARNING, no entry stored in dbm for [ENSG00000276758.1] WARNING, no entry stored in dbm for [ENSG00000233652.1] WARNING, no entry stored in dbm for [ENSG00000232226.2] WARNING, no entry stored in dbm for [ENSG00000254349.6] WARNING, no entry stored in dbm for [ENSG00000231646.6] WARNING, no entry stored in dbm for [ENSG00000287129.1] WARNING, no entry stored in dbm for [ENSG00000255052.5] WARNING, no entry stored in dbm for [ENSG00000254016.3] WARNING, no entry stored in dbm for [ENSG00000285417.1] WARNING, no entry stored in dbm for [ENSG00000286156.1] WARNING, no entry stored in dbm for [ENSG00000244198.7] WARNING, no entry stored in dbm for [ENSG00000285799.1] WARNING, no entry stored in dbm for [ENSG00000254741.1] WARNING, no entry stored in dbm for [ENSG00000227619.3] WARNING, no entry stored in dbm for [ENSG00000228685.1] WARNING, no entry stored in dbm for [ENSG00000234851.4] WARNING, no entry stored in dbm for [ENSG00000285424.1] WARNING, no entry stored in dbm for [ENSG00000286546.1] WARNING, no entry stored in dbm for [ENSG00000288543.1] WARNING, no entry stored in dbm for [ENSG00000226310.1] WARNING, no entry stored in dbm for [ENSG00000223959.8] WARNING, no entry stored in dbm for [ENSG00000255185.6] WARNING, no entry stored in dbm for [ENSG00000285062.1] WARNING, no entry stored in dbm for [ENSG00000285215.2] WARNING, no entry stored in dbm for [ENSG00000267198.1] WARNING, no entry stored in dbm for [ENSG00000131484.4] WARNING, no entry stored in dbm for [ENSG00000286935.1] WARNING, no entry stored in dbm for [ENSG00000259511.3] WARNING, no entry stored in dbm for [ENSG00000280331.1] WARNING, no entry stored in dbm for [ENSG00000233862.7] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000266869.2] WARNING, no entry stored in dbm for [ENSG00000254610.3] WARNING, no entry stored in dbm for [ENSG00000241278.1] WARNING, no entry stored in dbm for [ENSG00000237004.4] WARNING, no entry stored in dbm for [ENSG00000237004.4] WARNING, no entry stored in dbm for [ENSG00000231952.3] WARNING, no entry stored in dbm for [ENSG00000133624.13] WARNING, no entry stored in dbm for [ENSG00000268266.1] WARNING, no entry stored in dbm for [ENSG00000268266.1] WARNING, no entry stored in dbm for [ENSG00000278212.2] WARNING, no entry stored in dbm for [ENSG00000227671.4] WARNING, no entry stored in dbm for [ENSG00000235653.1] WARNING, no entry stored in dbm for [ENSG00000237232.9] WARNING, no entry stored in dbm for [ENSG00000240622.1] WARNING, no entry stored in dbm for [ENSG00000285331.2] WARNING, no entry stored in dbm for [ENSG00000186594.14] WARNING, no entry stored in dbm for [ENSG00000273192.1] WARNING, no entry stored in dbm for [ENSG00000287538.1] WARNING, no entry stored in dbm for [ENSG00000259652.1] WARNING, no entry stored in dbm for [ENSG00000232554.9] WARNING, no entry stored in dbm for [ENSG00000259577.2] WARNING, no entry stored in dbm for [ENSG00000233090.1] WARNING, no entry stored in dbm for [ENSG00000200434.1] WARNING, no entry stored in dbm for [ENSG00000279281.1] WARNING, no entry stored in dbm for [ENSG00000254762.1] WARNING, no entry stored in dbm for [ENSG00000189136.9] WARNING, no entry stored in dbm for [ENSG00000241621.1] WARNING, no entry stored in dbm for [ENSG00000277741.4] WARNING, no entry stored in dbm for [ENSG00000226803.9] WARNING, no entry stored in dbm for [ENSG00000269416.6] WARNING, no entry stored in dbm for [ENSG00000226383.7] WARNING, no entry stored in dbm for [ENSG00000235782.1] WARNING, no entry stored in dbm for [ENSG00000278866.1] WARNING, no entry stored in dbm for [ENSG00000240291.1] WARNING, no entry stored in dbm for [ENSG00000275643.1] WARNING, no entry stored in dbm for [ENSG00000273658.1] WARNING, no entry stored in dbm for [ENSG00000224081.9] WARNING, no entry stored in dbm for [ENSG00000234936.1] WARNING, no entry stored in dbm for [ENSG00000263669.2] WARNING, no entry stored in dbm for [ENSG00000223459.6] WARNING, no entry stored in dbm for [ENSG00000215158.9] WARNING, no entry stored in dbm for [ENSG00000266931.2] WARNING, no entry stored in dbm for [ENSG00000227101.2] WARNING, no entry stored in dbm for [ENSG00000260304.1] WARNING, no entry stored in dbm for [ENSG00000214870.9] WARNING, no entry stored in dbm for [ENSG00000205482.9] WARNING, no entry stored in dbm for [ENSG00000260917.1] WARNING, no entry stored in dbm for [ENSG00000158482.10] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000267321.3] WARNING, no entry stored in dbm for [ENSG00000267321.3] WARNING, no entry stored in dbm for [ENSG00000248121.8] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000225689.2] WARNING, no entry stored in dbm for [ENSG00000249258.2] WARNING, no entry stored in dbm for [ENSG00000206341.7] WARNING, no entry stored in dbm for [ENSG00000274370.1] WARNING, no entry stored in dbm for [ENSG00000228929.1] WARNING, no entry stored in dbm for [ENSG00000225750.1] WARNING, no entry stored in dbm for [ENSG00000283141.1] WARNING, no entry stored in dbm for [ENSG00000237877.7] WARNING, no entry stored in dbm for [ENSG00000228878.8] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000238035.8] WARNING, no entry stored in dbm for [ENSG00000283341.2] WARNING, no entry stored in dbm for [ENSG00000185986.12] WARNING, no entry stored in dbm for [ENSG00000188002.10] WARNING, no entry stored in dbm for [ENSG00000250159.7] WARNING, no entry stored in dbm for [ENSG00000225648.5] WARNING, no entry stored in dbm for [ENSG00000256969.2] WARNING, no entry stored in dbm for [ENSG00000281641.3] WARNING, no entry stored in dbm for [ENSG00000182841.12] WARNING, no entry stored in dbm for [ENSG00000238110.1] WARNING, no entry stored in dbm for [ENSG00000244378.1] WARNING, no entry stored in dbm for [ENSG00000214535.3] WARNING, no entry stored in dbm for [ENSG00000214089.3] WARNING, no entry stored in dbm for [ENSG00000243696.5] WARNING, no entry stored in dbm for [ENSG00000242248.2] WARNING, no entry stored in dbm for [ENSG00000242071.3] WARNING, no entry stored in dbm for [ENSG00000236801.1] WARNING, no entry stored in dbm for [ENSG00000244237.1] WARNING, no entry stored in dbm for [ENSG00000213178.3] WARNING, no entry stored in dbm for [ENSG00000213700.3] WARNING, no entry stored in dbm for [ENSG00000240624.1] WARNING, no entry stored in dbm for [ENSG00000244053.1] WARNING, no entry stored in dbm for [ENSG00000228754.1] WARNING, no entry stored in dbm for [ENSG00000241228.1] WARNING, no entry stored in dbm for [ENSG00000243007.1] WARNING, no entry stored in dbm for [ENSG00000235590.7] WARNING, no entry stored in dbm for [ENSG00000236195.1] WARNING, no entry stored in dbm for [ENSG00000236548.2] WARNING, no entry stored in dbm for [ENSG00000229956.11] WARNING, no entry stored in dbm for [ENSG00000255248.9] WARNING, no entry stored in dbm for [ENSG00000242315.3] WARNING, no entry stored in dbm for [ENSG00000223299.1] WARNING, no entry stored in dbm for [ENSG00000268754.4] WARNING, no entry stored in dbm for [ENSG00000234895.1] WARNING, no entry stored in dbm for [ENSG00000229419.1] WARNING, no entry stored in dbm for [ENSG00000196204.12] WARNING, no entry stored in dbm for [ENSG00000265313.7] WARNING, no entry stored in dbm for [ENSG00000253799.1] WARNING, no entry stored in dbm for [ENSG00000228031.4] WARNING, no entry stored in dbm for [ENSG00000270706.1] WARNING, no entry stored in dbm for [ENSG00000287984.1] WARNING, no entry stored in dbm for [ENSG00000124224.17] WARNING, no entry stored in dbm for [ENSG00000248441.7] WARNING, no entry stored in dbm for [ENSG00000262429.1] WARNING, no entry stored in dbm for [ENSG00000270571.2] WARNING, no entry stored in dbm for [ENSG00000228314.1] WARNING, no entry stored in dbm for [ENSG00000225724.1] WARNING, no entry stored in dbm for [ENSG00000280109.3] WARNING, no entry stored in dbm for [ENSG00000246889.2] WARNING, no entry stored in dbm for [ENSG00000242622.2] WARNING, no entry stored in dbm for [ENSG00000265273.1] WARNING, no entry stored in dbm for [ENSG00000255185.6] WARNING, no entry stored in dbm for [ENSG00000261845.2] WARNING, no entry stored in dbm for [ENSG00000226416.1] WARNING, no entry stored in dbm for [ENSG00000236366.3] WARNING, no entry stored in dbm for [ENSG00000255240.6] WARNING, no entry stored in dbm for [ENSG00000255875.2] WARNING, no entry stored in dbm for [ENSG00000269176.2] WARNING, no entry stored in dbm for [ENSG00000285999.1] WARNING, no entry stored in dbm for [ENSG00000235831.7] WARNING, no entry stored in dbm for [ENSG00000260075.1] WARNING, no entry stored in dbm for [ENSG00000263033.2] WARNING, no entry stored in dbm for [ENSG00000255213.1] WARNING, no entry stored in dbm for [ENSG00000237859.2] WARNING, no entry stored in dbm for [ENSG00000226232.8] WARNING, no entry stored in dbm for [ENSG00000228549.4] WARNING, no entry stored in dbm for [ENSG00000232729.8] WARNING, no entry stored in dbm for [ENSG00000250412.1] WARNING, no entry stored in dbm for [ENSG00000131484.4] WARNING, no entry stored in dbm for [ENSG00000243560.3] WARNING, no entry stored in dbm for [ENSG00000237263.1] WARNING, no entry stored in dbm for [ENSG00000269904.2] WARNING, no entry stored in dbm for [ENSG00000255521.2] WARNING, no entry stored in dbm for [ENSG00000286539.1] WARNING, no entry stored in dbm for [ENSG00000271404.1] WARNING, no entry stored in dbm for [ENSG00000267858.6] WARNING, no entry stored in dbm for [ENSG00000210194.1] WARNING, no entry stored in dbm for [ENSG00000214955.5] WARNING, no entry stored in dbm for [ENSG00000253200.1] WARNING, no entry stored in dbm for [ENSG00000254708.1] WARNING, no entry stored in dbm for [ENSG00000269609.6] WARNING, no entry stored in dbm for [ENSG00000267532.5] WARNING, no entry stored in dbm for [ENSG00000257084.1] WARNING, no entry stored in dbm for [ENSG00000244625.7] WARNING, no entry stored in dbm for [ENSG00000237609.1] WARNING, no entry stored in dbm for [ENSG00000234381.1] WARNING, no entry stored in dbm for [ENSG00000248796.1] WARNING, no entry stored in dbm for [ENSG00000242326.1] WARNING, no entry stored in dbm for [ENSG00000178722.13] WARNING, no entry stored in dbm for [ENSG00000286125.1] WARNING, no entry stored in dbm for [ENSG00000255856.2] WARNING, no entry stored in dbm for [ENSG00000277561.5] WARNING, no entry stored in dbm for [ENSG00000229291.1] WARNING, no entry stored in dbm for [ENSG00000248323.7] WARNING, no entry stored in dbm for [ENSG00000283196.2] WARNING, no entry stored in dbm for [ENSG00000258410.1] WARNING, no entry stored in dbm for [ENSG00000143429.10] WARNING, no entry stored in dbm for [ENSG00000266931.2] WARNING, no entry stored in dbm for [ENSG00000226419.8] WARNING, no entry stored in dbm for [ENSG00000228412.9] WARNING, no entry stored in dbm for [ENSG00000228412.9] WARNING, no entry stored in dbm for [ENSG00000182366.10] WARNING, no entry stored in dbm for [ENSG00000273356.1] WARNING, no entry stored in dbm for [ENSG00000234928.1] WARNING, no entry stored in dbm for [ENSG00000227755.1] WARNING, no entry stored in dbm for [ENSG00000218357.3] WARNING, no entry stored in dbm for [ENSG00000224017.2] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000267252.6] WARNING, no entry stored in dbm for [ENSG00000228659.1] WARNING, no entry stored in dbm for [ENSG00000213250.5] WARNING, no entry stored in dbm for [ENSG00000204588.5] WARNING, no entry stored in dbm for [ENSG00000228393.4] WARNING, no entry stored in dbm for [ENSG00000235314.1] WARNING, no entry stored in dbm for [ENSG00000225269.3] WARNING, no entry stored in dbm for [ENSG00000226067.7] WARNING, no entry stored in dbm for [ENSG00000237854.3] WARNING, no entry stored in dbm for [ENSG00000250274.2] WARNING, no entry stored in dbm for [ENSG00000253219.1] WARNING, no entry stored in dbm for [ENSG00000215807.4] WARNING, no entry stored in dbm for [ENSG00000226967.1] WARNING, no entry stored in dbm for [ENSG00000230710.2] WARNING, no entry stored in dbm for [ENSG00000255229.1] WARNING, no entry stored in dbm for [ENSG00000203799.13] WARNING, no entry stored in dbm for [ENSG00000213068.3] WARNING, no entry stored in dbm for [ENSG00000248968.1] WARNING, no entry stored in dbm for [ENSG00000249618.6] WARNING, no entry stored in dbm for [ENSG00000243759.1] WARNING, no entry stored in dbm for [ENSG00000230198.1] WARNING, no entry stored in dbm for [ENSG00000237916.1] WARNING, no entry stored in dbm for [ENSG00000254034.2] WARNING, no entry stored in dbm for [ENSG00000228918.4] WARNING, no entry stored in dbm for [ENSG00000286675.1] WARNING, no entry stored in dbm for [ENSG00000273763.2] WARNING, no entry stored in dbm for [ENSG00000214135.8] WARNING, no entry stored in dbm for [ENSG00000227733.10] WARNING, no entry stored in dbm for [ENSG00000285219.2] WARNING, no entry stored in dbm for [ENSG00000275767.1] WARNING, no entry stored in dbm for [ENSG00000233101.10] WARNING, no entry stored in dbm for [ENSG00000206228.4] WARNING, no entry stored in dbm for [ENSG00000213412.3] WARNING, no entry stored in dbm for [ENSG00000255050.1] WARNING, no entry stored in dbm for [ENSG00000204622.11] WARNING, no entry stored in dbm for [ENSG00000233299.1] WARNING, no entry stored in dbm for [ENSG00000279066.1] WARNING, no entry stored in dbm for [ENSG00000188388.10] WARNING, no entry stored in dbm for [ENSG00000228876.4] WARNING, no entry stored in dbm for [ENSG00000261716.2] WARNING, no entry stored in dbm for [ENSG00000220323.4] WARNING, no entry stored in dbm for [ENSG00000181201.3] WARNING, no entry stored in dbm for [ENSG00000231711.2] WARNING, no entry stored in dbm for [ENSG00000251451.1] WARNING, no entry stored in dbm for [ENSG00000230189.7] WARNING, no entry stored in dbm for [ENSG00000277053.4] WARNING, no entry stored in dbm for [ENSG00000078319.10] WARNING, no entry stored in dbm for [ENSG00000254454.2] WARNING, no entry stored in dbm for [ENSG00000103832.10] WARNING, no entry stored in dbm for [ENSG00000254618.1] WARNING, no entry stored in dbm for [ENSG00000274615.1] WARNING, no entry stored in dbm for [ENSG00000250959.2] WARNING, no entry stored in dbm for [ENSG00000246596.7] WARNING, no entry stored in dbm for [ENSG00000247982.6] WARNING, no entry stored in dbm for [ENSG00000282572.2] WARNING, no entry stored in dbm for [ENSG00000160766.14] WARNING, no entry stored in dbm for [ENSG00000214293.9] WARNING, no entry stored in dbm for [ENSG00000237264.4] WARNING, no entry stored in dbm for [ENSG00000253604.1] WARNING, no entry stored in dbm for [ENSG00000243243.5] WARNING, no entry stored in dbm for [ENSG00000223652.2] WARNING, no entry stored in dbm for [ENSG00000251600.8] WARNING, no entry stored in dbm for [ENSG00000241449.6] WARNING, no entry stored in dbm for [ENSG00000286912.1] WARNING, no entry stored in dbm for [ENSG00000233117.4] WARNING, no entry stored in dbm for [ENSG00000234709.2] WARNING, no entry stored in dbm for [ENSG00000224216.1] WARNING, no entry stored in dbm for [ENSG00000268869.6] WARNING, no entry stored in dbm for [ENSG00000273763.2] WARNING, no entry stored in dbm for [ENSG00000255035.2] WARNING, no entry stored in dbm for [ENSG00000226472.8] WARNING, no entry stored in dbm for [ENSG00000224963.3] WARNING, no entry stored in dbm for [ENSG00000244044.3] WARNING, no entry stored in dbm for [ENSG00000283544.1] WARNING, no entry stored in dbm for [ENSG00000225728.2] WARNING, no entry stored in dbm for [ENSG00000231952.3] WARNING, no entry stored in dbm for [ENSG00000214322.3] WARNING, no entry stored in dbm for [ENSG00000257556.2] WARNING, no entry stored in dbm for [ENSG00000260261.2] WARNING, no entry stored in dbm for [ENSG00000261879.7] WARNING, no entry stored in dbm for [ENSG00000206896.1] WARNING, no entry stored in dbm for [ENSG00000257913.2] WARNING, no entry stored in dbm for [ENSG00000288025.1] WARNING, no entry stored in dbm for [ENSG00000287463.1] WARNING, no entry stored in dbm for [ENSG00000251643.1] WARNING, no entry stored in dbm for [ENSG00000233369.7] WARNING, no entry stored in dbm for [ENSG00000239653.1] WARNING, no entry stored in dbm for [ENSG00000260896.6] WARNING, no entry stored in dbm for [ENSG00000259585.2] WARNING, no entry stored in dbm for [ENSG00000249917.3] WARNING, no entry stored in dbm for [ENSG00000247572.8] WARNING, no entry stored in dbm for [ENSG00000253803.1] WARNING, no entry stored in dbm for [ENSG00000243389.1] WARNING, no entry stored in dbm for [ENSG00000217769.4] WARNING, no entry stored in dbm for [ENSG00000238287.1] WARNING, no entry stored in dbm for [ENSG00000283458.1] WARNING, no entry stored in dbm for [ENSG00000215039.7] WARNING, no entry stored in dbm for [ENSG00000237187.9] WARNING, no entry stored in dbm for [ENSG00000223745.8] WARNING, no entry stored in dbm for [ENSG00000154874.15] WARNING, no entry stored in dbm for [ENSG00000154874.15] WARNING, no entry stored in dbm for [ENSG00000239521.9] WARNING, no entry stored in dbm for [ENSG00000227742.2] WARNING, no entry stored in dbm for [ENSG00000178722.13] WARNING, no entry stored in dbm for [ENSG00000259933.6] WARNING, no entry stored in dbm for [ENSG00000279497.1] WARNING, no entry stored in dbm for [ENSG00000254838.5] WARNING, no entry stored in dbm for [ENSG00000280424.1] WARNING, no entry stored in dbm for [ENSG00000216657.1] WARNING, no entry stored in dbm for [ENSG00000124549.14] WARNING, no entry stored in dbm for [ENSG00000236626.1] WARNING, no entry stored in dbm for [ENSG00000239791.2] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000243289.1] WARNING, no entry stored in dbm for [ENSG00000283101.1] WARNING, no entry stored in dbm for [ENSG00000204177.10] WARNING, no entry stored in dbm for [ENSG00000279022.1] WARNING, no entry stored in dbm for [ENSG00000233967.7] WARNING, no entry stored in dbm for [ENSG00000233967.7] WARNING, no entry stored in dbm for [ENSG00000253837.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000235919.4] WARNING, no entry stored in dbm for [ENSG00000235919.4] WARNING, no entry stored in dbm for [ENSG00000271147.8] WARNING, no entry stored in dbm for [ENSG00000244198.7] WARNING, no entry stored in dbm for [ENSG00000270641.1] WARNING, no entry stored in dbm for [ENSG00000267136.1] WARNING, no entry stored in dbm for [ENSG00000255191.1] WARNING, no entry stored in dbm for [ENSG00000231811.3] WARNING, no entry stored in dbm for [ENSG00000254632.2] WARNING, no entry stored in dbm for [ENSG00000255177.2] WARNING, no entry stored in dbm for [ENSG00000266373.1] WARNING, no entry stored in dbm for [ENSG00000257086.1] WARNING, no entry stored in dbm for [ENSG00000179967.11] WARNING, no entry stored in dbm for [ENSG00000246889.2] WARNING, no entry stored in dbm for [ENSG00000259516.2] WARNING, no entry stored in dbm for [ENSG00000223784.2] WARNING, no entry stored in dbm for [ENSG00000214389.2] WARNING, no entry stored in dbm for [ENSG00000235085.3] WARNING, no entry stored in dbm for [ENSG00000270780.1] WARNING, no entry stored in dbm for [ENSG00000234589.4] WARNING, no entry stored in dbm for [ENSG00000286537.1] WARNING, no entry stored in dbm for [ENSG00000227034.1] WARNING, no entry stored in dbm for [ENSG00000223478.1] WARNING, no entry stored in dbm for [ENSG00000226403.2] WARNING, no entry stored in dbm for [ENSG00000270103.3] WARNING, no entry stored in dbm for [ENSG00000286215.1] WARNING, no entry stored in dbm for [ENSG00000254473.1] WARNING, no entry stored in dbm for [ENSG00000247970.2] WARNING, no entry stored in dbm for [ENSG00000283773.1] WARNING, no entry stored in dbm for [ENSG00000287449.1] WARNING, no entry stored in dbm for [ENSG00000287430.1] WARNING, no entry stored in dbm for [ENSG00000228863.8] WARNING, no entry stored in dbm for [ENSG00000240401.9] WARNING, no entry stored in dbm for [ENSG00000235122.4] WARNING, no entry stored in dbm for [ENSG00000243831.1] WARNING, no entry stored in dbm for [ENSG00000223653.6] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000274760.1] WARNING, no entry stored in dbm for [ENSG00000250917.1] WARNING, no entry stored in dbm for [ENSG00000288543.1] WARNING, no entry stored in dbm for [ENSG00000280011.1] WARNING, no entry stored in dbm for [ENSG00000286652.1] WARNING, no entry stored in dbm for [ENSG00000232599.1] WARNING, no entry stored in dbm for [ENSG00000277053.4] WARNING, no entry stored in dbm for [ENSG00000255085.8] WARNING, no entry stored in dbm for [ENSG00000236548.2] WARNING, no entry stored in dbm for [ENSG00000234667.2] WARNING, no entry stored in dbm for [ENSG00000260391.2] WARNING, no entry stored in dbm for [ENSG00000234981.1] WARNING, no entry stored in dbm for [ENSG00000226448.1] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000261093.1] WARNING, no entry stored in dbm for [ENSG00000287905.1] WARNING, no entry stored in dbm for [ENSG00000235354.1] WARNING, no entry stored in dbm for [ENSG00000287935.1] WARNING, no entry stored in dbm for [ENSG00000278212.2] WARNING, no entry stored in dbm for [ENSG00000099725.14] WARNING, no entry stored in dbm for [ENSG00000255991.2] WARNING, no entry stored in dbm for [ENSG00000213979.3] WARNING, no entry stored in dbm for [ENSG00000277332.1] WARNING, no entry stored in dbm for [ENSG00000230282.1] WARNING, no entry stored in dbm for [ENSG00000287067.1] WARNING, no entry stored in dbm for [ENSG00000250159.7] WARNING, no entry stored in dbm for [ENSG00000229498.1] WARNING, no entry stored in dbm for [ENSG00000259692.6] WARNING, no entry stored in dbm for [ENSG00000257178.5] WARNING, no entry stored in dbm for [ENSG00000287129.1] WARNING, no entry stored in dbm for [ENSG00000284624.1] WARNING, no entry stored in dbm for [ENSG00000248618.1] WARNING, no entry stored in dbm for [ENSG00000236773.1] WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [ENSG00000266931.2] WARNING, no entry stored in dbm for [ENSG00000288633.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000239969.5] WARNING, no entry stored in dbm for [ENSG00000249923.1] WARNING, no entry stored in dbm for [ENSG00000259363.6] WARNING, no entry stored in dbm for [ENSG00000253107.1] WARNING, no entry stored in dbm for [ENSG00000253107.1] WARNING, no entry stored in dbm for [ENSG00000204055.5] WARNING, no entry stored in dbm for [ENSG00000253107.1] WARNING, no entry stored in dbm for [ENSG00000204055.5] WARNING, no entry stored in dbm for [ENSG00000253107.1] WARNING, no entry stored in dbm for [ENSG00000204055.5] WARNING, no entry stored in dbm for [ENSG00000265750.1] WARNING, no entry stored in dbm for [ENSG00000235530.7] WARNING, no entry stored in dbm for [ENSG00000272693.4] WARNING, no entry stored in dbm for [ENSG00000227113.2] WARNING, no entry stored in dbm for [ENSG00000229172.1] WARNING, no entry stored in dbm for [ENSG00000284663.1] WARNING, no entry stored in dbm for [ENSG00000284610.1] WARNING, no entry stored in dbm for [ENSG00000274828.1] WARNING, no entry stored in dbm for [ENSG00000279421.1] WARNING, no entry stored in dbm for [ENSG00000287710.1] WARNING, no entry stored in dbm for [ENSG00000267002.4] WARNING, no entry stored in dbm for [ENSG00000188002.10] WARNING, no entry stored in dbm for [ENSG00000257386.1] WARNING, no entry stored in dbm for [ENSG00000287286.1] WARNING, no entry stored in dbm for [ENSG00000255621.1] WARNING, no entry stored in dbm for [ENSG00000285600.1] WARNING, no entry stored in dbm for [ENSG00000213386.3] WARNING, no entry stored in dbm for [ENSG00000286415.1] WARNING, no entry stored in dbm for [ENSG00000269032.1] WARNING, no entry stored in dbm for [ENSG00000184319.16] WARNING, no entry stored in dbm for [ENSG00000288559.1] WARNING, no entry stored in dbm for [ENSG00000235036.4] WARNING, no entry stored in dbm for [ENSG00000288535.1] WARNING, no entry stored in dbm for [ENSG00000280061.1] WARNING, no entry stored in dbm for [ENSG00000249839.1] WARNING, no entry stored in dbm for [ENSG00000233539.5] WARNING, no entry stored in dbm for [ENSG00000225582.2] WARNING, no entry stored in dbm for [ENSG00000181524.6] WARNING, no entry stored in dbm for [ENSG00000230355.1] WARNING, no entry stored in dbm for [ENSG00000216895.9] WARNING, no entry stored in dbm for [ENSG00000216895.9] WARNING, no entry stored in dbm for [ENSG00000280416.1] WARNING, no entry stored in dbm for [ENSG00000249526.1] WARNING, no entry stored in dbm for [ENSG00000226472.8] WARNING, no entry stored in dbm for [ENSG00000267498.2] WARNING, no entry stored in dbm for [ENSG00000287712.1] WARNING, no entry stored in dbm for [ENSG00000164845.16] WARNING, no entry stored in dbm for [ENSG00000259005.1] WARNING, no entry stored in dbm for [ENSG00000267243.6] WARNING, no entry stored in dbm for [ENSG00000286830.1] WARNING, no entry stored in dbm for [ENSG00000267623.3] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000243554.1] WARNING, no entry stored in dbm for [ENSG00000272854.1] WARNING, no entry stored in dbm for [ENSG00000228204.2] WARNING, no entry stored in dbm for [ENSG00000250522.1] WARNING, no entry stored in dbm for [ENSG00000224322.2] WARNING, no entry stored in dbm for [ENSG00000267328.1] * STAR-Fusion complete. See output: /tmp/nxf.Ir91kNnE1W/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)