Work Directory

Task
NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (FFPE_V4_0002_RNA_0001_A23T55JLT4_1)
Attempt
2
S3 Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0f/4ea969fe630b24f721dec847d6cf0f

Files (32)

Name Size Modified
.command.begin 6 bytes Jun 08, 2026 2:12 AM
.command.err 46.3 KB Jun 08, 2026 3:16 AM
.command.log 47.7 KB Jun 08, 2026 3:16 AM
.command.out 453 bytes Jun 08, 2026 3:16 AM
.command.run 15.1 KB Jun 08, 2026 2:12 AM
.command.sh 1.3 KB Jun 08, 2026 2:12 AM
.command.trace 292 bytes Jun 08, 2026 3:16 AM
.command.yaml 3.8 KB Jun 08, 2026 2:12 AM
.exitcode 1 byte Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.cancer.introns 528.3 KB Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.cancer.introns.prelim 1.0 MB Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.cancer_intron_reads.sorted.bam 4.7 MB Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.cancer_intron_reads.sorted.bam.bai 1.4 MB Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.chckpts/FFPE_V4_0002_RNA_0001_A23T55JLT4_1.cancer_intron_reads.sorted.bam.indexed.ok 0 bytes Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.chckpts/FFPE_V4_0002_RNA_0001_A23T55JLT4_1.gene_reads.sorted.sifted.bam.indexed.ok 0 bytes Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.chckpts/FFPE_V4_0002_RNA_0001_A23T55JLT4_1.gene_reads.sorted.sifted.bam.tmp.ok 0 bytes Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.chckpts/FFPE_V4_0002_RNA_0001_A23T55JLT4_1.gene_reads.sorted.sifted.bam.tmpsorted.ok 0 bytes Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.chckpts/igv_create_html.ok 0 bytes Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.chckpts/intron_igv_bed.ok 0 bytes Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.chckpts/introns.ok 0 bytes Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.chckpts/introns_filtered.ok 0 bytes Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.chckpts/prelim_introns.ok 0 bytes Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.chckpts/reads_alignments_extracted.ok 0 bytes Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.chckpts/sort_cancer_intron_reads.ok 0 bytes Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.chckpts/sort_gene_reads.ok 0 bytes Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.ctat-splicing.igv.html 574.5 MB Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.gene_reads.sorted.sifted.bam 266.2 MB Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.gene_reads.sorted.sifted.bam.bai 1.6 MB Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.igv.tracks 1.1 KB Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.introns 14.4 MB Jun 08, 2026 3:16 AM
FFPE_V4_0002_RNA_0001_A23T55JLT4_1.introns.for_IGV.bed 5.3 MB Jun 08, 2026 3:16 AM
versions.yml 88 bytes Jun 08, 2026 3:16 AM