Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dd/5ab519dc5305afa91803cb6278c001/1173_C31_T1_RNA_SLD_01_A23T55JLT4_1.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fb/8293133c87bf7e99b6cc103e35bcc6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fb/8293133c87bf7e99b6cc103e35bcc6/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/90/aacaa29cdc7a67fecf76c641093dbb/1173_C31_T1_RNA_SLD_01_A23T55JLT4_1
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 1173_C31_T1_RNA_SLD_01_A23T55JLT4_1/abundance.h5
Successfully converted 1173_C31_T1_RNA_SLD_01_A23T55JLT4_1/abundance.h5 to 1173_C31_T1_RNA_SLD_01_A23T55JLT4_1_kallisto_mqc.tsv
  Sample: 1173_C31_T1_RNA_SLD_01_A23T55JLT4_1
  Mean Fragment Length: 113.3 bp
  Median Fragment Length: 106.0 bp
  pct_mito_est_counts: 0.031%
  pct_ribo_est_counts: 1.154%
  pct_hk_est_counts: 0.515%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.062%
  pct_ribo_tpm: 3.335%
  pct_hk_tpm: 0.769%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 5.829%