.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:EXTRACT_VAF_FEATURES (1173_QJL_T1_RNA_SLD_01_A23T55JLT4_2)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/ff28fb7f62a9f4459f9269c51de04e/.command.log
Size: 582 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:EXTRACT_VAF_FEATURES (1173_QJL_T1_RNA_SLD_01_A23T55JLT4_2)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/02/4f4627641710d601ad92d96eaa2f6b/1173_QJL_T1_RNA_SLD_01_A23T55JLT4_2.vcf
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/ff28fb7f62a9f4459f9269c51de04e/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/ff28fb7f62a9f4459f9269c51de04e/.command.run
==> STAGING COMPLETE (3 inputs)

Processing 1 VCF file(s)...
  1173_QJL_T1_RNA_SLD_01_A23T55JLT4_2: n_snps=13522, vaf_p90=1.000000

Output saved to: 1173_QJL_T1_RNA_SLD_01_A23T55JLT4_2.features.csv
Processed 1 sample(s)