AIH curated blacklist: matched 10 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 168
Pass (FILTER=PASS): 8 (4.8%)
Fail (FILTER=FAIL): 160 (95.2%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 10
All 10 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 71
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 13
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 7
confidence_below_min(low<high): 7
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0);aih_curated_blacklist: 2
confidence_below_min(low<high);aih_curated_blacklist: 2
total_reads_below_min(5.0<8.0): 1
Breakdown by confidence:
high: 8 pass, 2 fail (total: 10)
low: 0 pass, 58 fail (total: 58)
medium: 0 pass, 100 fail (total: 100)
Arriba filter: 168 rows -> 8 PASS; wrote 1173_C31_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filtered.tsv and 1173_C31_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: 1173_C31_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filter_summary.txt