AIH curated blacklist: matched 6 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 313
Pass (FILTER=PASS): 71 (22.7%)
Fail (FILTER=FAIL): 242 (77.3%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 6
All 6 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 72
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 30
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 28
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 19
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(low<high): 8
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 4
total_reads_below_min(6.0<8.0): 3
Breakdown by confidence:
high: 71 pass, 9 fail (total: 80)
low: 0 pass, 82 fail (total: 82)
medium: 0 pass, 151 fail (total: 151)
Arriba filter: 313 rows -> 71 PASS; wrote 1173_KTN_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filtered.tsv and 1173_KTN_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 1173_KTN_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filter_summary.txt