AIH curated blacklist: matched 4 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 553
Pass (FILTER=PASS): 21 (3.8%)
Fail (FILTER=FAIL): 532 (96.2%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 4
All 4 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 180
confidence_below_min(medium<high): 80
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 42
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 36
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 36
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 31
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 30
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 16
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 10
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 10
confidence_below_min(low<high): 10
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 6
Breakdown by confidence:
high: 21 pass, 6 fail (total: 27)
low: 0 pass, 307 fail (total: 307)
medium: 0 pass, 219 fail (total: 219)
Arriba filter: 553 rows -> 21 PASS; wrote 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filtered.tsv and 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filter_summary.txt