Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/8cce9acd6b906a1647cde72c28b3eb/1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/3ab7b14fc9d28e11740fb0abdee03b/1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/a7c905120b0984236ef799048045f5/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/8cce9acd6b906a1647cde72c28b3eb/1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1_2.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/da/a7c905120b0984236ef799048045f5/.command.run
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.19m9onKBR3/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.19m9onKBR3/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.19m9onKBR3/./star-fusion.preliminary
-sample contains 265946703 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.19m9onKBR3/ctat_genome_lib_build_dir  -J /tmp/nxf.19m9onKBR3/1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction  -O /tmp/nxf.19m9onKBR3/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.19m9onKBR3/1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.19m9onKBR3/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[2630000], ra-building interval tree based on /tmp/nxf.19m9onKBR3/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[2680000], rate=53051.80/min 
[2690000], rate=52883.36/min 
[2700000], rate=52768.73/min 
[2710000], rate=52621.36/min 
-building interval tree based on /tmp/nxf.19m9onKBR3/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=50000.00/min 
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[30000], rate=41860.47/min 
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[2680000], rate=40059.79/min 
[2690000], rate=40059.57/min 
[2700000], rate=39980.26/min 
[2710000], rate=39921.43/min 
-building interval tree based on /tmp/nxf.19m9onKBR3/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=60000.00/min 
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[5570000], rate=45862.49/min 
[5580000], rate=45888.16/min 
[5590000], rate=45907.47/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.19m9onKBR3/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.19m9onKBR3/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.19m9onKBR3/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.19m9onKBR3/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.19m9onKBR3/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

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done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.19m9onKBR3/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.19m9onKBR3/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.19m9onKBR3/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.19m9onKBR3/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.19m9onKBR3/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.19m9onKBR3/1173_JXL_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.19m9onKBR3/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.19m9onKBR3/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.19m9onKBR3/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -6955266.775554
EM: Round [1] log likelihood: -6954678.914974
EM: Round [2] log likelihood: -6954476.597193
EM: Round [3] log likelihood: -6954382.489292
EM: Round [4] log likelihood: -6954332.101519
EM: Round [5] log likelihood: -6954302.815404
EM: Round [6] log likelihood: -6954284.741398
EM: Round [7] log likelihood: -6954273.004930
EM: Round [8] log likelihood: -6954265.026160
EM: Round [9] log likelihood: -6954259.372591
EM: Round [10] log likelihood: -6954255.217554
EM: Round [11] log likelihood: -6954252.066272
EM: Round [12] log likelihood: -6954249.611674
EM: Round [13] log likelihood: -6954247.656311
EM: Round [14] log likelihood: -6954246.068862
EM: Round [15] log likelihood: -6954244.759212
EM: Round [16] log likelihood: -6954243.663745
EM: Round [17] log likelihood: -6954242.736410
EM: Round [18] log likelihood: -6954241.943134
EM: Round [19] log likelihood: -6954241.258220
EM: Round [20] log likelihood: -6954240.661970
EM: Round [21] log likelihood: -6954240.139059
EM: Round [22] log likelihood: -6954239.677412
EM: Round [23] log likelihood: -6954239.267404
EM: Round [24] log likelihood: -6954238.901280
EM: Round [25] log likelihood: -6954238.572735
EM: Round [26] log likelihood: -6954238.276592
EM: Round [27] log likelihood: -6954238.008571
EM: Round [28] log likelihood: -6954237.765100
EM: Round [29] log likelihood: -6954237.543182
EM: Round [30] log likelihood: -6954237.340279
EM: Round [31] log likelihood: -6954237.154235
EM: Round [32] log likelihood: -6954236.983203
EM: Round [33] log likelihood: -6954236.825592
EM: Round [34] log likelihood: -6954236.680026
EM: Round [35] log likelihood: -6954236.545308
EM: Round [36] log likelihood: -6954236.420392
EM: Round [37] log likelihood: -6954236.304360
EM: Round [38] log likelihood: -6954236.196403
EM: Round [39] log likelihood: -6954236.095803
EM: Round [40] log likelihood: -6954236.001925
EM: Round [41] log likelihood: -6954235.914202
EM: Round [42] log likelihood: -6954235.832126
EM: Round [43] log likelihood: -6954235.755242
EM: Round [44] log likelihood: -6954235.683140
EM: Round [45] log likelihood: -6954235.615451
EM: Round [46] log likelihood: -6954235.551841
EM: Round [47] log likelihood: -6954235.492005
EM: Round [48] log likelihood: -6954235.435670
EM: Round [49] log likelihood: -6954235.382583
EM: Round [50] log likelihood: -6954235.332515
EM: Round [51] log likelihood: -6954235.285257
EM: Round [52] log likelihood: -6954235.240616
EM: Round [53] log likelihood: -6954235.198417
EM: Round [54] log likelihood: -6954235.158496
EM: Round [55] log likelihood: -6954235.120705
EM: Round [56] log likelihood: -6954235.084906
EM: Round [57] log likelihood: -6954235.050972
EM: Round [58] log likelihood: -6954235.018785
EM: Round [59] log likelihood: -6954234.988237
EM: Round [60] log likelihood: -6954234.959227
EM: Round [61] log likelihood: -6954234.931660
EM: Round [62] log likelihood: -6954234.905451
EM: Round [63] log likelihood: -6954234.880519
EM: Round [64] log likelihood: -6954234.856787
EM: Round [65] log likelihood: -6954234.834187
EM: Round [66] log likelihood: -6954234.812653
EM: Round [67] log likelihood: -6954234.792124
EM: Round [68] log likelihood: -6954234.772544
EM: Round [69] log likelihood: -6954234.753858
EM: Round [70] log likelihood: -6954234.736018
EM: Round [71] log likelihood: -6954234.718977
EM: Round [72] log likelihood: -6954234.702692
EM: Round [73] log likelihood: -6954234.687122
EM: Round [74] log likelihood: -6954234.672228
EM: Round [75] log likelihood: -6954234.657975
EM: Round [76] log likelihood: -6954234.644329
EM: Round [77] log likelihood: -6954234.631258
EM: Round [78] log likelihood: -6954234.618734
EM: Round [79] log likelihood: -6954234.606727
EM: Round [80] log likelihood: -6954234.595212
EM: Round [81] log likelihood: -6954234.584164
EM: Round [82] log likelihood: -6954234.573560
EM: Round [83] log likelihood: -6954234.563378
EM: Round [84] log likelihood: -6954234.553596
EM: Round [85] log likelihood: -6954234.544197
EM: Round [86] log likelihood: -6954234.535161
EM: Round [87] log likelihood: -6954234.526471
EM: Round [88] log likelihood: -6954234.518111
EM: Round [89] log likelihood: -6954234.510066
EM: Round [90] log likelihood: -6954234.502320
EM: Round [91] log likelihood: -6954234.494860
EM: Round [92] log likelihood: -6954234.487673
EM: Round [93] log likelihood: -6954234.480746
EM: Round [94] log likelihood: -6954234.474068
EM: Round [95] log likelihood: -6954234.467628
EM: Round [96] log likelihood: -6954234.461416
EM: Round [97] log likelihood: -6954234.455420
EM: Round [98] log likelihood: -6954234.449633
EM: Round [99] log likelihood: -6954234.444045
EM: Round [100] log likelihood: -6954234.438647
EM: Round [101] log likelihood: -6954234.433432
EM: Round [102] log likelihood: -6954234.428392
EM: Round [103] log likelihood: -6954234.423520
EM: Round [104] log likelihood: -6954234.418808
EM: Round [105] log likelihood: -6954234.414251
EM: Round [106] log likelihood: -6954234.409842
EM: Round [107] log likelihood: -6954234.405575
EM: Round [108] log likelihood: -6954234.401444
EM: Round [109] log likelihood: -6954234.397445
EM: Round [110] log likelihood: -6954234.393571
EM: Round [111] log likelihood: -6954234.389819
EM: Round [112] log likelihood: -6954234.386183
EM: Round [113] log likelihood: -6954234.382659
EM: Round [114] log likelihood: -6954234.379243
EM: Round [115] log likelihood: -6954234.375931
EM: Round [116] log likelihood: -6954234.372719
EM: Round [117] log likelihood: -6954234.369604
EM: Round [118] log likelihood: -6954234.366581
EM: Round [119] log likelihood: -6954234.363647
EM: Round [120] log likelihood: -6954234.360800
EM: Round [121] log likelihood: -6954234.358036
EM: Round [122] log likelihood: -6954234.355353
EM: Round [123] log likelihood: -6954234.352746
EM: Round [124] log likelihood: -6954234.350215
EM: Round [125] log likelihood: -6954234.347756
EM: Round [126] log likelihood: -6954234.345367
EM: Round [127] log likelihood: -6954234.343045
EM: Round [128] log likelihood: -6954234.340788
EM: Round [129] log likelihood: -6954234.338594
EM: Round [130] log likelihood: -6954234.336461
EM: Round [131] log likelihood: -6954234.334387
EM: Round [132] log likelihood: -6954234.332370
EM: Round [133] log likelihood: -6954234.330408
EM: Round [134] log likelihood: -6954234.328499
EM: Round [135] log likelihood: -6954234.326642
EM: Round [136] log likelihood: -6954234.324835
EM: Round [137] log likelihood: -6954234.323077
EM: Round [138] log likelihood: -6954234.321366
EM: Round [139] log likelihood: -6954234.319700
EM: Round [140] log likelihood: -6954234.318078
EM: Round [141] log likelihood: -6954234.316499
EM: Round [142] log likelihood: -6954234.314961
EM: Round [143] log likelihood: -6954234.313464
EM: Round [144] log likelihood: -6954234.312005
EM: Round [145] log likelihood: -6954234.310585
EM: Round [146] log likelihood: -6954234.309201
EM: Round [147] log likelihood: -6954234.307853
EM: Round [148] log likelihood: -6954234.306539
EM: Round [149] log likelihood: -6954234.305259
EM: Round [150] log likelihood: -6954234.304012
EM: Round [151] log likelihood: -6954234.302796
EM: Round [152] log likelihood: -6954234.301611
EM: Round [153] log likelihood: -6954234.300456
EM: Round [154] log likelihood: -6954234.299330
EM: Round [155] log likelihood: -6954234.298232
EM: Round [156] log likelihood: -6954234.297162
EM: Round [157] log likelihood: -6954234.296119
EM: Round [158] log likelihood: -6954234.295101
EM: Round [159] log likelihood: -6954234.294109
EM: Round [160] log likelihood: -6954234.293141
EM: Round [161] log likelihood: -6954234.292197
EM: Round [162] log likelihood: -6954234.291276
EM: Round [163] log likelihood: -6954234.290378
EM: Round [164] log likelihood: -6954234.289502
EM: Round [165] log likelihood: -6954234.288647
EM: Round [166] log likelihood: -6954234.287813
EM: Round [167] log likelihood: -6954234.287000
EM: Round [168] log likelihood: -6954234.286206
EM: Round [169] log likelihood: -6954234.285431
EM: Round [170] log likelihood: -6954234.284675
EM: Round [171] log likelihood: -6954234.283937
EM: Round [172] log likelihood: -6954234.283217
EM: Round [173] log likelihood: -6954234.282515
EM: Round [174] log likelihood: -6954234.281829
EM: Round [175] log likelihood: -6954234.281159
EM: Round [176] log likelihood: -6954234.280506
EM: Round [177] log likelihood: -6954234.279868
EM: Round [178] log likelihood: -6954234.279245
EM: Round [179] log likelihood: -6954234.278637
EM: Round [180] log likelihood: -6954234.278044
EM: Round [181] log likelihood: -6954234.277464
EM: Round [182] log likelihood: -6954234.276898
EM: Round [183] log likelihood: -6954234.276346
EM: Round [184] log likelihood: -6954234.275806
EM: Round [185] log likelihood: -6954234.275280
EM: Round [186] log likelihood: -6954234.274765
EM: Round [187] log likelihood: -6954234.274263
EM: Round [188] log likelihood: -6954234.273773
EM: Round [189] log likelihood: -6954234.273293
EM: Round [190] log likelihood: -6954234.272826
EM: Round [191] log likelihood: -6954234.272369
EM: Round [192] log likelihood: -6954234.271922
EM: Round [193] log likelihood: -6954234.271486
EM: Round [194] log likelihood: -6954234.271061
EM: Round [195] log likelihood: -6954234.270645
EM: Round [196] log likelihood: -6954234.270239
EM: Round [197] log likelihood: -6954234.269842
EM: Round [198] log likelihood: -6954234.269454
EM: Round [199] log likelihood: -6954234.269076
EM: Round [200] log likelihood: -6954234.268706
EM: Round [201] log likelihood: -6954234.268344
EM: Round [202] log likelihood: -6954234.267991
EM: Round [203] log likelihood: -6954234.267646
EM: Round [204] log likelihood: -6954234.267309
EM: Round [205] log likelihood: -6954234.266980
EM: Round [206] log likelihood: -6954234.266658
EM: Round [207] log likelihood: -6954234.266344
EM: Round [208] log likelihood: -6954234.266037
EM: Round [209] log likelihood: -6954234.265737
EM: Round [210] log likelihood: -6954234.265444
EM: Round [211] log likelihood: -6954234.265157
EM: Round [212] log likelihood: -6954234.264877
EM: Round [213] log likelihood: -6954234.264604
EM: Round [214] log likelihood: -6954234.264336
EM: Round [215] log likelihood: -6954234.264075
EM: Round [216] log likelihood: -6954234.263820
EM: Round [217] log likelihood: -6954234.263570
EM: Round [218] log likelihood: -6954234.263327
EM: Round [219] log likelihood: -6954234.263088
EM: Round [220] log likelihood: -6954234.262856
EM: Round [221] log likelihood: -6954234.262628
EM: Round [222] log likelihood: -6954234.262406
EM: Round [223] log likelihood: -6954234.262188
EM: Round [224] log likelihood: -6954234.261976
EM: Round [225] log likelihood: -6954234.261768
EM: Round [226] log likelihood: -6954234.261565
EM: Round [227] log likelihood: -6954234.261367
EM: Round [228] log likelihood: -6954234.261173
EM: Round [229] log likelihood: -6954234.260984
EM: Round [230] log likelihood: -6954234.260799
EM: Round [231] log likelihood: -6954234.260618
EM: Round [232] log likelihood: -6954234.260441
EM: Round [233] log likelihood: -6954234.260268
EM: Round [234] log likelihood: -6954234.260099
EM: Round [235] log likelihood: -6954234.259934
EM: Round [236] log likelihood: -6954234.259772
EM: Round [237] log likelihood: -6954234.259614
EM: Round [238] log likelihood: -6954234.259460
EM: Round [239] log likelihood: -6954234.259309
EM: Round [240] log likelihood: -6954234.259162
EM: Round [241] log likelihood: -6954234.259017
EM: Round [242] log likelihood: -6954234.258877
EM: Round [243] log likelihood: -6954234.258739
EM: Round [244] log likelihood: -6954234.258604
EM: Round [245] log likelihood: -6954234.258472
EM: Round [246] log likelihood: -6954234.258344
EM: Round [247] log likelihood: -6954234.258218
EM: Round [248] log likelihood: -6954234.258095
EM: Round [249] log likelihood: -6954234.257975
EM: Round [250] log likelihood: -6954234.257857
EM: Round [251] log likelihood: -6954234.257742
EM: Round [252] log likelihood: -6954234.257630
EM: Round [253] log likelihood: -6954234.257520
EM: Round [254] log likelihood: -6954234.257413
EM: Round [255] log likelihood: -6954234.257308
EM: Round [256] log likelihood: -6954234.257205
EM: Round [257] log likelihood: -6954234.257105
EM: Round [258] log likelihood: -6954234.257007
EM: Stopping iterations at round 258 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -6947799.166930
EM: Round [1] log likelihood: -6947367.833904
EM: Round [2] log likelihood: -6947223.218398
EM: Round [3] log likelihood: -6947157.920470
EM: Round [4] log likelihood: -6947124.129691
EM: Round [5] log likelihood: -6947105.211525
EM: Round [6] log likelihood: -6947093.979464
EM: Round [7] log likelihood: -6947086.956246
EM: Round [8] log likelihood: -6947082.348251
EM: Round [9] log likelihood: -6947079.186657
EM: Round [10] log likelihood: -6947076.926936
EM: Round [11] log likelihood: -6947075.251653
EM: Round [12] log likelihood: -6947073.969265
EM: Round [13] log likelihood: -6947072.960279
EM: Round [14] log likelihood: -6947072.147664
EM: Round [15] log likelihood: -6947071.480149
EM: Round [16] log likelihood: -6947070.922547
EM: Round [17] log likelihood: -6947070.450025
EM: Round [18] log likelihood: -6947070.044602
EM: Round [19] log likelihood: -6947069.692970
EM: Round [20] log likelihood: -6947069.385083
EM: Round [21] log likelihood: -6947069.113231
EM: Round [22] log likelihood: -6947068.871405
EM: Round [23] log likelihood: -6947068.654860
EM: Round [24] log likelihood: -6947068.459804
EM: Round [25] log likelihood: -6947068.283172
EM: Round [26] log likelihood: -6947068.122464
EM: Round [27] log likelihood: -6947067.975620
EM: Round [28] log likelihood: -6947067.840927
EM: Round [29] log likelihood: -6947067.716951
EM: Round [30] log likelihood: -6947067.602481
EM: Round [31] log likelihood: -6947067.496487
EM: Round [32] log likelihood: -6947067.398088
EM: Round [33] log likelihood: -6947067.306523
EM: Round [34] log likelihood: -6947067.221136
EM: Round [35] log likelihood: -6947067.141351
EM: Round [36] log likelihood: -6947067.066666
EM: Round [37] log likelihood: -6947066.996639
EM: Round [38] log likelihood: -6947066.930878
EM: Round [39] log likelihood: -6947066.869034
EM: Round [40] log likelihood: -6947066.810797
EM: Round [41] log likelihood: -6947066.755888
EM: Round [42] log likelihood: -6947066.704057
EM: Round [43] log likelihood: -6947066.655078
EM: Round [44] log likelihood: -6947066.608747
EM: Round [45] log likelihood: -6947066.564878
EM: Round [46] log likelihood: -6947066.523303
EM: Round [47] log likelihood: -6947066.483866
EM: Round [48] log likelihood: -6947066.446428
EM: Round [49] log likelihood: -6947066.410858
EM: Round [50] log likelihood: -6947066.377037
EM: Round [51] log likelihood: -6947066.344857
EM: Round [52] log likelihood: -6947066.314216
EM: Round [53] log likelihood: -6947066.285022
EM: Round [54] log likelihood: -6947066.257187
EM: Round [55] log likelihood: -6947066.230631
EM: Round [56] log likelihood: -6947066.205281
EM: Round [57] log likelihood: -6947066.181068
EM: Round [58] log likelihood: -6947066.157926
EM: Round [59] log likelihood: -6947066.135797
EM: Round [60] log likelihood: -6947066.114625
EM: Round [61] log likelihood: -6947066.094357
EM: Round [62] log likelihood: -6947066.074944
EM: Round [63] log likelihood: -6947066.056342
EM: Round [64] log likelihood: -6947066.038508
EM: Round [65] log likelihood: -6947066.021402
EM: Round [66] log likelihood: -6947066.004986
EM: Round [67] log likelihood: -6947065.989225
EM: Round [68] log likelihood: -6947065.974086
EM: Round [69] log likelihood: -6947065.959539
EM: Round [70] log likelihood: -6947065.945554
EM: Round [71] log likelihood: -6947065.932104
EM: Round [72] log likelihood: -6947065.919162
EM: Round [73] log likelihood: -6947065.906705
EM: Round [74] log likelihood: -6947065.894710
EM: Round [75] log likelihood: -6947065.883155
EM: Round [76] log likelihood: -6947065.872020
EM: Round [77] log likelihood: -6947065.861285
EM: Round [78] log likelihood: -6947065.850933
EM: Round [79] log likelihood: -6947065.840946
EM: Round [80] log likelihood: -6947065.831308
EM: Round [81] log likelihood: -6947065.822003
EM: Round [82] log likelihood: -6947065.813017
EM: Round [83] log likelihood: -6947065.804336
EM: Round [84] log likelihood: -6947065.795948
EM: Round [85] log likelihood: -6947065.787839
EM: Round [86] log likelihood: -6947065.779998
EM: Round [87] log likelihood: -6947065.772415
EM: Round [88] log likelihood: -6947065.765077
EM: Round [89] log likelihood: -6947065.757976
EM: Round [90] log likelihood: -6947065.751102
EM: Round [91] log likelihood: -6947065.744446
EM: Round [92] log likelihood: -6947065.737998
EM: Round [93] log likelihood: -6947065.731752
EM: Round [94] log likelihood: -6947065.725699
EM: Round [95] log likelihood: -6947065.719832
EM: Round [96] log likelihood: -6947065.714143
EM: Round [97] log likelihood: -6947065.708626
EM: Round [98] log likelihood: -6947065.703275
EM: Round [99] log likelihood: -6947065.698083
EM: Round [100] log likelihood: -6947065.693045
EM: Round [101] log likelihood: -6947065.688155
EM: Round [102] log likelihood: -6947065.683407
EM: Round [103] log likelihood: -6947065.678797
EM: Round [104] log likelihood: -6947065.674320
EM: Round [105] log likelihood: -6947065.669971
EM: Round [106] log likelihood: -6947065.665745
EM: Round [107] log likelihood: -6947065.661639
EM: Round [108] log likelihood: -6947065.657648
EM: Round [109] log likelihood: -6947065.653769
EM: Round [110] log likelihood: -6947065.649997
EM: Round [111] log likelihood: -6947065.646329
EM: Round [112] log likelihood: -6947065.642762
EM: Round [113] log likelihood: -6947065.639293
EM: Round [114] log likelihood: -6947065.635918
EM: Round [115] log likelihood: -6947065.632633
EM: Round [116] log likelihood: -6947065.629438
EM: Round [117] log likelihood: -6947065.626327
EM: Round [118] log likelihood: -6947065.623300
EM: Round [119] log likelihood: -6947065.620352
EM: Round [120] log likelihood: -6947065.617483
EM: Round [121] log likelihood: -6947065.614688
EM: Round [122] log likelihood: -6947065.611967
EM: Round [123] log likelihood: -6947065.609317
EM: Round [124] log likelihood: -6947065.606735
EM: Round [125] log likelihood: -6947065.604220
EM: Round [126] log likelihood: -6947065.601770
EM: Round [127] log likelihood: -6947065.599383
EM: Round [128] log likelihood: -6947065.597056
EM: Round [129] log likelihood: -6947065.594789
EM: Round [130] log likelihood: -6947065.592579
EM: Round [131] log likelihood: -6947065.590425
EM: Round [132] log likelihood: -6947065.588325
EM: Round [133] log likelihood: -6947065.586277
EM: Round [134] log likelihood: -6947065.584281
EM: Round [135] log likelihood: -6947065.582335
EM: Round [136] log likelihood: -6947065.580437
EM: Round [137] log likelihood: -6947065.578586
EM: Round [138] log likelihood: -6947065.576781
EM: Round [139] log likelihood: -6947065.575021
EM: Round [140] log likelihood: -6947065.573303
EM: Round [141] log likelihood: -6947065.571628
EM: Round [142] log likelihood: -6947065.569993
EM: Round [143] log likelihood: -6947065.568399
EM: Round [144] log likelihood: -6947065.566843
EM: Round [145] log likelihood: -6947065.565325
EM: Round [146] log likelihood: -6947065.563844
EM: Round [147] log likelihood: -6947065.562398
EM: Round [148] log likelihood: -6947065.560988
EM: Round [149] log likelihood: -6947065.559611
EM: Round [150] log likelihood: -6947065.558267
EM: Round [151] log likelihood: -6947065.556956
EM: Round [152] log likelihood: -6947065.555675
EM: Round [153] log likelihood: -6947065.554426
EM: Round [154] log likelihood: -6947065.553206
EM: Round [155] log likelihood: -6947065.552015
EM: Round [156] log likelihood: -6947065.550852
EM: Round [157] log likelihood: -6947065.549717
EM: Round [158] log likelihood: -6947065.548609
EM: Round [159] log likelihood: -6947065.547527
EM: Round [160] log likelihood: -6947065.546470
EM: Round [161] log likelihood: -6947065.545438
EM: Round [162] log likelihood: -6947065.544431
EM: Round [163] log likelihood: -6947065.543447
EM: Round [164] log likelihood: -6947065.542486
EM: Round [165] log likelihood: -6947065.541547
EM: Round [166] log likelihood: -6947065.540631
EM: Round [167] log likelihood: -6947065.539736
EM: Round [168] log likelihood: -6947065.538861
EM: Round [169] log likelihood: -6947065.538007
EM: Round [170] log likelihood: -6947065.537173
EM: Round [171] log likelihood: -6947065.536358
EM: Round [172] log likelihood: -6947065.535563
EM: Round [173] log likelihood: -6947065.534785
EM: Round [174] log likelihood: -6947065.534026
EM: Round [175] log likelihood: -6947065.533284
EM: Round [176] log likelihood: -6947065.532559
EM: Round [177] log likelihood: -6947065.531851
EM: Round [178] log likelihood: -6947065.531159
EM: Round [179] log likelihood: -6947065.530483
EM: Round [180] log likelihood: -6947065.529823
EM: Round [181] log likelihood: -6947065.529177
EM: Round [182] log likelihood: -6947065.528547
EM: Round [183] log likelihood: -6947065.527931
EM: Round [184] log likelihood: -6947065.527329
EM: Round [185] log likelihood: -6947065.526741
EM: Round [186] log likelihood: -6947065.526166
EM: Round [187] log likelihood: -6947065.525605
EM: Round [188] log likelihood: -6947065.525056
EM: Round [189] log likelihood: -6947065.524520
EM: Round [190] log likelihood: -6947065.523996
EM: Round [191] log likelihood: -6947065.523484
EM: Round [192] log likelihood: -6947065.522984
EM: Round [193] log likelihood: -6947065.522495
EM: Round [194] log likelihood: -6947065.522017
EM: Round [195] log likelihood: -6947065.521550
EM: Round [196] log likelihood: -6947065.521093
EM: Round [197] log likelihood: -6947065.520647
EM: Round [198] log likelihood: -6947065.520211
EM: Round [199] log likelihood: -6947065.519785
EM: Round [200] log likelihood: -6947065.519369
EM: Round [201] log likelihood: -6947065.518961
EM: Round [202] log likelihood: -6947065.518564
EM: Round [203] log likelihood: -6947065.518175
EM: Round [204] log likelihood: -6947065.517795
EM: Round [205] log likelihood: -6947065.517423
EM: Round [206] log likelihood: -6947065.517060
EM: Round [207] log likelihood: -6947065.516705
EM: Round [208] log likelihood: -6947065.516358
EM: Round [209] log likelihood: -6947065.516019
EM: Round [210] log likelihood: -6947065.515687
EM: Round [211] log likelihood: -6947065.515363
EM: Round [212] log likelihood: -6947065.515047
EM: Round [213] log likelihood: -6947065.514737
EM: Round [214] log likelihood: -6947065.514434
EM: Round [215] log likelihood: -6947065.514138
EM: Round [216] log likelihood: -6947065.513849
EM: Round [217] log likelihood: -6947065.513566
EM: Round [218] log likelihood: -6947065.513290
EM: Round [219] log likelihood: -6947065.513020
EM: Round [220] log likelihood: -6947065.512756
EM: Round [221] log likelihood: -6947065.512497
EM: Round [222] log likelihood: -6947065.512245
EM: Round [223] log likelihood: -6947065.511998
EM: Round [224] log likelihood: -6947065.511757
EM: Round [225] log likelihood: -6947065.511521
EM: Round [226] log likelihood: -6947065.511290
EM: Round [227] log likelihood: -6947065.511065
EM: Round [228] log likelihood: -6947065.510845
EM: Round [229] log likelihood: -6947065.510629
EM: Round [230] log likelihood: -6947065.510418
EM: Round [231] log likelihood: -6947065.510212
EM: Round [232] log likelihood: -6947065.510011
EM: Round [233] log likelihood: -6947065.509814
EM: Round [234] log likelihood: -6947065.509622
EM: Round [235] log likelihood: -6947065.509434
EM: Round [236] log likelihood: -6947065.509250
EM: Round [237] log likelihood: -6947065.509070
EM: Round [238] log likelihood: -6947065.508894
EM: Round [239] log likelihood: -6947065.508722
EM: Round [240] log likelihood: -6947065.508554
EM: Round [241] log likelihood: -6947065.508389
EM: Round [242] log likelihood: -6947065.508228
EM: Round [243] log likelihood: -6947065.508071
EM: Round [244] log likelihood: -6947065.507918
EM: Round [245] log likelihood: -6947065.507767
EM: Round [246] log likelihood: -6947065.507620
EM: Round [247] log likelihood: -6947065.507477
EM: Round [248] log likelihood: -6947065.507336
EM: Round [249] log likelihood: -6947065.507199
EM: Round [250] log likelihood: -6947065.507065
EM: Round [251] log likelihood: -6947065.506933
EM: Round [252] log likelihood: -6947065.506805
EM: Round [253] log likelihood: -6947065.506679
EM: Round [254] log likelihood: -6947065.506557
EM: Round [255] log likelihood: -6947065.506437
EM: Round [256] log likelihood: -6947065.506319
EM: Round [257] log likelihood: -6947065.506205
EM: Round [258] log likelihood: -6947065.506092
EM: Round [259] log likelihood: -6947065.505983
EM: Round [260] log likelihood: -6947065.505875
EM: Round [261] log likelihood: -6947065.505770
EM: Round [262] log likelihood: -6947065.505668
EM: Round [263] log likelihood: -6947065.505567
EM: Round [264] log likelihood: -6947065.505469
EM: Stopping iterations at round 264 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.19m9onKBR3/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.19m9onKBR3/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.19m9onKBR3/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.19m9onKBR3/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.19m9onKBR3/ctat_genome_lib_build_dir