AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 372
Pass (FILTER=PASS): 57 (15.3%)
Fail (FILTER=FAIL): 315 (84.7%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 112
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 58
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 21
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 20
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 17
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 17
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 7
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 4
confidence_below_min(low<high): 4
Breakdown by confidence:
high: 57 pass, 8 fail (total: 65)
low: 0 pass, 125 fail (total: 125)
medium: 0 pass, 182 fail (total: 182)
Arriba filter: 372 rows -> 57 PASS; wrote 1173_NWE_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filtered.tsv and 1173_NWE_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: 1173_NWE_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filter_summary.txt