File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c1/319f6e3cbf263db84b335619c90676/.command.err
Size
566 bytes
Task
NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (1173_FWA_T1_RNA_SLD_01_A23T55JLT4_1)
Attempt

Content

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Processing Kallisto file: 1173_FWA_T1_RNA_SLD_01_A23T55JLT4_1/abundance.h5
Successfully converted 1173_FWA_T1_RNA_SLD_01_A23T55JLT4_1/abundance.h5 to 1173_FWA_T1_RNA_SLD_01_A23T55JLT4_1_kallisto_mqc.tsv
  Sample: 1173_FWA_T1_RNA_SLD_01_A23T55JLT4_1
  Mean Fragment Length: 125.1 bp
  Median Fragment Length: 117.0 bp
  pct_mito_est_counts: 0.016%
  pct_ribo_est_counts: 1.009%
  pct_hk_est_counts: 0.569%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.033%
  pct_ribo_tpm: 2.999%
  pct_hk_tpm: 0.875%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 4.727%