AIH curated blacklist: matched 4 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 174
Pass (FILTER=PASS): 21 (12.1%)
Fail (FILTER=FAIL): 153 (87.9%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 4
All 4 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 34
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 19
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 16
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 9
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 9
confidence_below_min(low<high): 7
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 2
aih_curated_blacklist: 1
total_reads_below_min(6.0<8.0): 1
Breakdown by confidence:
high: 21 pass, 5 fail (total: 26)
low: 0 pass, 52 fail (total: 52)
medium: 0 pass, 96 fail (total: 96)
Arriba filter: 174 rows -> 21 PASS; wrote 1173_T46_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filtered.tsv and 1173_T46_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 1173_T46_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filter_summary.txt