File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e3/1d2fd8e20c6478dfd4ed10fd170008/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:34:18
                             Started mapping on |	Jun 08 10:40:56
                                    Finished on |	Jun 08 11:51:50
       Mapping speed, Million of reads per hour |	248.57

                          Number of input reads |	293729159
                      Average input read length |	205
                                    UNIQUE READS:
                   Uniquely mapped reads number |	256152724
                        Uniquely mapped reads % |	87.21%
                          Average mapped length |	204.30
                       Number of splices: Total |	193413210
            Number of splices: Annotated (sjdb) |	188964298
                       Number of splices: GT/AG |	190981061
                       Number of splices: GC/AG |	1314861
                       Number of splices: AT/AC |	158779
               Number of splices: Non-canonical |	958509
                      Mismatch rate per base, % |	0.38%
                         Deletion rate per base |	0.03%
                        Deletion average length |	2.00
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.77
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	32552743
             % of reads mapped to multiple loci |	11.08%
        Number of reads mapped to too many loci |	849428
             % of reads mapped to too many loci |	0.29%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	3674419
                 % of reads unmapped: too short |	1.25%
                Number of reads unmapped: other |	499845
                     % of reads unmapped: other |	0.17%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%