File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1e/fd1ef6fd5d83a9eb790c2820f043ad/.command.err
Size
564 bytes
Task
NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (1173_CH0_T1_RNA_SLD_01_A23T55JLT4_1)
Attempt

Content

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Processing Kallisto file: 1173_CH0_T1_RNA_SLD_01_A23T55JLT4_1/abundance.h5
Successfully converted 1173_CH0_T1_RNA_SLD_01_A23T55JLT4_1/abundance.h5 to 1173_CH0_T1_RNA_SLD_01_A23T55JLT4_1_kallisto_mqc.tsv
  Sample: 1173_CH0_T1_RNA_SLD_01_A23T55JLT4_1
  Mean Fragment Length: 108.9 bp
  Median Fragment Length: 104.0 bp
  pct_mito_est_counts: 0.004%
  pct_ribo_est_counts: 0.716%
  pct_hk_est_counts: 0.358%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.008%
  pct_ribo_tpm: 2.253%
  pct_hk_tpm: 0.58%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 0.03%