NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_1) - dev_rna_exp0016-73d51683 - Workflow Tracker

Runs
dev_rna_exp0016-73d51683
Tasks
GATK4_MARKDUPLICATES (1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_1)

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Task Info

Status: succeeded
Hash: 4604f8b88b5a
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: 1173_Q7O_T1_RNA_SLD_01_A23T55JLT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 79/c513ad
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/79/c513ad5c9b6e2827feb02c41fa8914
Native ID: nf-79c513ad5c9b6e2827feb02c41fa8914-e1f84

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 100.6 GB / 148.0 GB
Process I/O (rchar / wchar): 54.9 GB / 36.4 GB
Disk I/O (read / write): - / 36.4 GB
Host: i-0685aaf006dd7ffba ( on-demand)

Runtime

Submitted: Jun 08, 2026 1:58:38 AM
Completed: Jun 08, 2026 2:46:12 AM
Total Duration: 47m 33s

Phases

Queue: 49s
Execution: 44m 40s
Stage/Unstage: 2m 4s

Attempt 1

Execution

Status: failed
Hash: c5/672543
Failure Reason: spot eviction ()
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c5/6725437cea17dfd0fb83ea5ec02709
Native ID: nf-c56725437cea17dfd0fb83ea5ec02709-10225

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 74.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0c436b0734f574031 ( spot)

Runtime

Submitted: Jun 08, 2026 1:26:38 AM
Completed: Jun 08, 2026 1:58:38 AM
Total Duration: 31m 59s

Phases

Queue: 31m 59s
Execution: -
Stage/Unstage: -