2026-06-08T06:18:14Z thread 472 Sample sheet being processed by common lib? Yes
2026-06-08T06:18:14Z thread 472 SampleSheet Settings:
2026-06-08T06:18:14Z thread 472 FastqCompressionFormat = gzip
2026-06-08T06:18:14Z thread 472 NoLaneSplitting = FALSE
2026-06-08T06:18:14Z thread 472 OverrideCycles = Y151;I10;I10;Y151
2026-06-08T06:18:14Z thread 472 SoftwareVersion = 4.3.6
2026-06-08T06:18:14Z thread 472
2026-06-08T06:18:14Z thread 472 Index Read 2 (i5): The barcode and UMI outputs will be processed and output in Reverse Complement of Sample Sheet inputs. OverrideCycles bases for this read will be interpreted in reverse.
2026-06-08T06:18:15Z thread 472 shared-thread-linux-native-asio output is disabled
2026-06-08T06:18:15Z thread 472 bcl-convert Version 4.4.6
2026-06-08T06:18:15Z thread 472 Copyright (c) 2014-2025 Illumina, Inc.
2026-06-08T06:18:15Z thread 472 Command Line: --tiles s_4 --output-directory output --bcl-input-directory rundir --sample-sheet rundir/SampleSheet.csv
2026-06-08T06:18:15Z thread 472 Conversion Begins.
2026-06-08T06:18:15Z thread 472 Input BCL Information:
2026-06-08T06:18:15Z thread 472 Read Structure: 2026-06-08T06:18:15Z thread 472 Y1512026-06-08T06:18:15Z thread 472 ;2026-06-08T06:18:15Z thread 472 I102026-06-08T06:18:15Z thread 472 ;2026-06-08T06:18:15Z thread 472 I102026-06-08T06:18:15Z thread 472 ;2026-06-08T06:18:15Z thread 472 Y1512026-06-08T06:18:15Z thread 472
2026-06-08T06:18:15Z thread 472 RunInfo.xml file lists: 8 lanes, 6272 tiles
2026-06-08T06:18:15Z thread 472 BCL file format: cbcl
2026-06-08T06:18:15Z thread 472 Positions file format: slocs
2026-06-08T06:18:15Z thread 472 Filter file format: filter
2026-06-08T06:18:15Z thread 472 Conversion Information:
2026-06-08T06:18:15Z thread 472 Tile filtering: converting 784/6272 tiles
2026-06-08T06:18:15Z thread 472 Sample Count for Lane 1: 96
2026-06-08T06:18:15Z thread 472 Lane 1 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:18:15Z thread 472 Sample Count for Lane 2: 96
2026-06-08T06:18:15Z thread 472 Lane 2 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:18:15Z thread 472 Sample Count for Lane 3: 96
2026-06-08T06:18:15Z thread 472 Lane 3 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:18:15Z thread 472 Sample Count for Lane 4: 96
2026-06-08T06:18:15Z thread 472 Sample Count for Lane 5: 96
2026-06-08T06:18:15Z thread 472 Lane 5 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:18:15Z thread 472 Sample Count for Lane 6: 96
2026-06-08T06:18:15Z thread 472 Lane 6 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:18:15Z thread 472 Sample Count for Lane 7: 96
2026-06-08T06:18:15Z thread 472 Lane 7 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:18:15Z thread 472 Sample Count for Lane 8: 96
2026-06-08T06:18:15Z thread 472 Lane 8 will be skipped because there are no tiles to convert (not listed in RunInfo.xml tile list?)
2026-06-08T06:18:15Z thread 472 Expected number of sample FASTQ files to be created: 192
2026-06-08T06:18:15Z thread 472 # CPU hw threads available: 64
2026-06-08T06:18:15Z thread 472 Parallel Tiles: 4. Threads Per Tile: 16
2026-06-08T06:18:15Z thread 472 SW compressors: 64
2026-06-08T06:18:15Z thread 472 SW decompressors: 32
2026-06-08T06:18:15Z thread 472 SW FASTQ compression level: 1
2026-06-08T06:39:28Z thread 472 Lane 4 Post-run Information:
2026-06-08T06:39:28Z thread 472 Total clusters: 3706675031
2026-06-08T06:39:28Z thread 472 Total Genomic Reads: 7413350062
2026-06-08T06:39:28Z thread 472 Total Genomic Input Gigabases 1119.42
2026-06-08T06:39:28Z thread 472 Minimum reads for a sample: 4294
2026-06-08T06:39:28Z thread 472 Maximum reads for a sample: 192174148
2026-06-08T06:39:28Z thread 472 Average reads per sample: 71516297.60
2026-06-08T06:39:28Z thread 472 Undetermined reads: 547785492
2026-06-08T06:39:29Z thread 472 Conversion Complete.