[W::hts_idx_load3] The index file is older than the data file: 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	339976394
Known Splicing Events:	337589313
Partial Novel Splicing Events:	1495008
Novel Splicing Events:	812123
Filtered Splicing Events:	79950

Total splicing  Junctions:	601447
Known Splicing Junctions:	292190
Partial Novel Splicing Junctions:	181086
Novel Splicing Junctions:	128171

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Create BED file ...
Create Interact file ...