AIH curated blacklist: matched 9 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 130
Pass (FILTER=PASS): 4 (3.1%)
Fail (FILTER=FAIL): 126 (96.9%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 9
All 9 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 31
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 11
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 10
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 10
confidence_below_min(low<high): 10
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 5
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(3.0<8.0);aih_curated_blacklist: 2
total_reads_below_min(3.0<8.0): 1
Breakdown by confidence:
high: 4 pass, 1 fail (total: 5)
low: 0 pass, 40 fail (total: 40)
medium: 0 pass, 85 fail (total: 85)
Arriba filter: 130 rows -> 4 PASS; wrote 1173_RDM_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filtered.tsv and 1173_RDM_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filtered_pass_only.tsv
Summary written to: 1173_RDM_T1_RNA_SLD_01_A23T55JLT4_1.arriba.fusions.filter_summary.txt