Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/07/11978fe060f32340e17bf02502d904/1173_JLC_T1_RNA_SLD_01_A23T55JLT4_2_2.fastp.fastq.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/25/cd1c3ff6b83aa2151ace6f643dbdc0/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/25/cd1c3ff6b83aa2151ace6f643dbdc0/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/07/11978fe060f32340e17bf02502d904/1173_JLC_T1_RNA_SLD_01_A23T55JLT4_2_1.fastp.fastq.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e3/899915d2405ef08a254ea5ff631cd3/1173_JLC_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction
==> STAGING COMPLETE (6 inputs)

-ctat genome lib [/tmp/nxf.vP1D3iwCej/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.vP1D3iwCej/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary
-sample contains 294346551 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.vP1D3iwCej/ctat_genome_lib_build_dir  -J /tmp/nxf.vP1D3iwCej/1173_JLC_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction  -O /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.vP1D3iwCej/1173_JLC_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction
-building interval tree based on /tmp/nxf.vP1D3iwCej/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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-building interval tree based on /tmp/nxf.vP1D3iwCej/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[2620000], rate=50336.22/min 
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[2680000], rate=50597.86/min 
[2690000], rate=50659.13/min 
[2700000], rate=50688.36/min 
[2710000], rate=50701.59/min 
-building interval tree based on /tmp/nxf.vP1D3iwCej/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=40000.00/min 
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[30000], rate=40909.09/min 
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[2680000], rate=49476.92/min 
[2690000], rate=49600.49/min 
[2700000], rate=49708.50/min 
[2710000], rate=49800.92/min 
-building interval tree based on /tmp/nxf.vP1D3iwCej/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=75000.00/min 
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[30000], rate=75000.00/min 
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[3650000], rate=48526.48/min 
[3660000], rate=48605.58/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.vP1D3iwCej/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
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done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.vP1D3iwCej/1173_JLC_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.vP1D3iwCej/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -6392634.219977
EM: Round [1] log likelihood: -6391862.993573
EM: Round [2] log likelihood: -6391616.720610
EM: Round [3] log likelihood: -6391507.060681
EM: Round [4] log likelihood: -6391449.484100
EM: Round [5] log likelihood: -6391416.079926
EM: Round [6] log likelihood: -6391395.222688
EM: Round [7] log likelihood: -6391381.367476
EM: Round [8] log likelihood: -6391371.648941
EM: Round [9] log likelihood: -6391364.503037
EM: Round [10] log likelihood: -6391359.036438
EM: Round [11] log likelihood: -6391354.716688
EM: Round [12] log likelihood: -6391351.212779
EM: Round [13] log likelihood: -6391348.310270
EM: Round [14] log likelihood: -6391345.864703
EM: Round [15] log likelihood: -6391343.775237
EM: Round [16] log likelihood: -6391341.969234
EM: Round [17] log likelihood: -6391340.392925
EM: Round [18] log likelihood: -6391339.005569
EM: Round [19] log likelihood: -6391337.775667
EM: Round [20] log likelihood: -6391336.678444
EM: Round [21] log likelihood: -6391335.694116
EM: Round [22] log likelihood: -6391334.806675
EM: Round [23] log likelihood: -6391334.003018
EM: Round [24] log likelihood: -6391333.272307
EM: Round [25] log likelihood: -6391332.605495
EM: Round [26] log likelihood: -6391331.994963
EM: Round [27] log likelihood: -6391331.434251
EM: Round [28] log likelihood: -6391330.917841
EM: Round [29] log likelihood: -6391330.440989
EM: Round [30] log likelihood: -6391329.999594
EM: Round [31] log likelihood: -6391329.590094
EM: Round [32] log likelihood: -6391329.209376
EM: Round [33] log likelihood: -6391328.854711
EM: Round [34] log likelihood: -6391328.523694
EM: Round [35] log likelihood: -6391328.214198
EM: Round [36] log likelihood: -6391327.924338
EM: Round [37] log likelihood: -6391327.652431
EM: Round [38] log likelihood: -6391327.396978
EM: Round [39] log likelihood: -6391327.156633
EM: Round [40] log likelihood: -6391326.930189
EM: Round [41] log likelihood: -6391326.716558
EM: Round [42] log likelihood: -6391326.514756
EM: Round [43] log likelihood: -6391326.323896
EM: Round [44] log likelihood: -6391326.143170
EM: Round [45] log likelihood: -6391325.971847
EM: Round [46] log likelihood: -6391325.809259
EM: Round [47] log likelihood: -6391325.654797
EM: Round [48] log likelihood: -6391325.507905
EM: Round [49] log likelihood: -6391325.368074
EM: Round [50] log likelihood: -6391325.234837
EM: Round [51] log likelihood: -6391325.107766
EM: Round [52] log likelihood: -6391324.986466
EM: Round [53] log likelihood: -6391324.870574
EM: Round [54] log likelihood: -6391324.759756
EM: Round [55] log likelihood: -6391324.653703
EM: Round [56] log likelihood: -6391324.552128
EM: Round [57] log likelihood: -6391324.454768
EM: Round [58] log likelihood: -6391324.361376
EM: Round [59] log likelihood: -6391324.271727
EM: Round [60] log likelihood: -6391324.185608
EM: Round [61] log likelihood: -6391324.102823
EM: Round [62] log likelihood: -6391324.023190
EM: Round [63] log likelihood: -6391323.946538
EM: Round [64] log likelihood: -6391323.872709
EM: Round [65] log likelihood: -6391323.801554
EM: Round [66] log likelihood: -6391323.732936
EM: Round [67] log likelihood: -6391323.666724
EM: Round [68] log likelihood: -6391323.602798
EM: Round [69] log likelihood: -6391323.541044
EM: Round [70] log likelihood: -6391323.481357
EM: Round [71] log likelihood: -6391323.423635
EM: Round [72] log likelihood: -6391323.367786
EM: Round [73] log likelihood: -6391323.313722
EM: Round [74] log likelihood: -6391323.261360
EM: Round [75] log likelihood: -6391323.210621
EM: Round [76] log likelihood: -6391323.161434
EM: Round [77] log likelihood: -6391323.113728
EM: Round [78] log likelihood: -6391323.067440
EM: Round [79] log likelihood: -6391323.022506
EM: Round [80] log likelihood: -6391322.978869
EM: Round [81] log likelihood: -6391322.936475
EM: Round [82] log likelihood: -6391322.895272
EM: Round [83] log likelihood: -6391322.855210
EM: Round [84] log likelihood: -6391322.816243
EM: Round [85] log likelihood: -6391322.778327
EM: Round [86] log likelihood: -6391322.741421
EM: Round [87] log likelihood: -6391322.705485
EM: Round [88] log likelihood: -6391322.670481
EM: Round [89] log likelihood: -6391322.636374
EM: Round [90] log likelihood: -6391322.603131
EM: Round [91] log likelihood: -6391322.570718
EM: Round [92] log likelihood: -6391322.539105
EM: Round [93] log likelihood: -6391322.508264
EM: Round [94] log likelihood: -6391322.478167
EM: Round [95] log likelihood: -6391322.448786
EM: Round [96] log likelihood: -6391322.420098
EM: Round [97] log likelihood: -6391322.392078
EM: Round [98] log likelihood: -6391322.364702
EM: Round [99] log likelihood: -6391322.337951
EM: Round [100] log likelihood: -6391322.311801
EM: Round [101] log likelihood: -6391322.286235
EM: Round [102] log likelihood: -6391322.261232
EM: Round [103] log likelihood: -6391322.236774
EM: Round [104] log likelihood: -6391322.212844
EM: Round [105] log likelihood: -6391322.189425
EM: Round [106] log likelihood: -6391322.166501
EM: Round [107] log likelihood: -6391322.144058
EM: Round [108] log likelihood: -6391322.122079
EM: Round [109] log likelihood: -6391322.100552
EM: Round [110] log likelihood: -6391322.079462
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EM: Round [112] log likelihood: -6391322.038545
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EM: Round [114] log likelihood: -6391321.999229
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EM: Round [116] log likelihood: -6391321.961424
EM: Round [117] log likelihood: -6391321.943062
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EM: Round [120] log likelihood: -6391321.890021
EM: Round [121] log likelihood: -6391321.872992
EM: Round [122] log likelihood: -6391321.856275
EM: Round [123] log likelihood: -6391321.839860
EM: Round [124] log likelihood: -6391321.823740
EM: Round [125] log likelihood: -6391321.807908
EM: Round [126] log likelihood: -6391321.792356
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EM: Round [129] log likelihood: -6391321.747312
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EM: Round [132] log likelihood: -6391321.704549
EM: Round [133] log likelihood: -6391321.690773
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EM: Round [138] log likelihood: -6391321.625232
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EM: Round [141] log likelihood: -6391321.588399
EM: Round [142] log likelihood: -6391321.576509
EM: Round [143] log likelihood: -6391321.564805
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EM: Round [145] log likelihood: -6391321.541941
EM: Round [146] log likelihood: -6391321.530773
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EM: Round [149] log likelihood: -6391321.498279
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EM: Round [487] log likelihood: -6391320.592346
EM: Round [488] log likelihood: -6391320.591884
EM: Round [489] log likelihood: -6391320.591425
EM: Round [490] log likelihood: -6391320.590969
EM: Round [491] log likelihood: -6391320.590517
EM: Round [492] log likelihood: -6391320.590067
EM: Round [493] log likelihood: -6391320.589621
EM: Round [494] log likelihood: -6391320.589177
EM: Round [495] log likelihood: -6391320.588737
EM: Round [496] log likelihood: -6391320.588300
EM: Round [497] log likelihood: -6391320.587866
EM: Round [498] log likelihood: -6391320.587435
EM: Round [499] log likelihood: -6391320.587006
EM: Round [500] log likelihood: -6391320.586581
EM: Round [501] log likelihood: -6391320.586159
EM: Round [502] log likelihood: -6391320.585740
EM: Round [503] log likelihood: -6391320.585323
EM: Round [504] log likelihood: -6391320.584910
EM: Round [505] log likelihood: -6391320.584499
EM: Round [506] log likelihood: -6391320.584091
EM: Round [507] log likelihood: -6391320.583686
EM: Round [508] log likelihood: -6391320.583283
EM: Round [509] log likelihood: -6391320.582884
EM: Round [510] log likelihood: -6391320.582487
EM: Round [511] log likelihood: -6391320.582093
EM: Round [512] log likelihood: -6391320.581701
EM: Round [513] log likelihood: -6391320.581313
EM: Round [514] log likelihood: -6391320.580927
EM: Round [515] log likelihood: -6391320.580543
EM: Round [516] log likelihood: -6391320.580162
EM: Round [517] log likelihood: -6391320.579784
EM: Round [518] log likelihood: -6391320.579409
EM: Round [519] log likelihood: -6391320.579036
EM: Round [520] log likelihood: -6391320.578665
EM: Round [521] log likelihood: -6391320.578297
EM: Round [522] log likelihood: -6391320.577932
EM: Round [523] log likelihood: -6391320.577569
EM: Round [524] log likelihood: -6391320.577208
EM: Round [525] log likelihood: -6391320.576850
EM: Round [526] log likelihood: -6391320.576495
EM: Round [527] log likelihood: -6391320.576141
EM: Round [528] log likelihood: -6391320.575791
EM: Round [529] log likelihood: -6391320.575442
EM: Round [530] log likelihood: -6391320.575096
EM: Round [531] log likelihood: -6391320.574752
EM: Round [532] log likelihood: -6391320.574411
EM: Round [533] log likelihood: -6391320.574072
EM: Round [534] log likelihood: -6391320.573735
EM: Round [535] log likelihood: -6391320.573401
EM: Round [536] log likelihood: -6391320.573068
EM: Round [537] log likelihood: -6391320.572738
EM: Round [538] log likelihood: -6391320.572411
EM: Round [539] log likelihood: -6391320.572085
EM: Round [540] log likelihood: -6391320.571762
EM: Round [541] log likelihood: -6391320.571440
EM: Round [542] log likelihood: -6391320.571121
EM: Round [543] log likelihood: -6391320.570805
EM: Round [544] log likelihood: -6391320.570490
EM: Round [545] log likelihood: -6391320.570177
EM: Round [546] log likelihood: -6391320.569867
EM: Round [547] log likelihood: -6391320.569558
EM: Round [548] log likelihood: -6391320.569252
EM: Round [549] log likelihood: -6391320.568948
EM: Round [550] log likelihood: -6391320.568645
EM: Round [551] log likelihood: -6391320.568345
EM: Round [552] log likelihood: -6391320.568047
EM: Round [553] log likelihood: -6391320.567751
EM: Round [554] log likelihood: -6391320.567456
EM: Round [555] log likelihood: -6391320.567164
EM: Round [556] log likelihood: -6391320.566874
EM: Round [557] log likelihood: -6391320.566585
EM: Round [558] log likelihood: -6391320.566299
EM: Round [559] log likelihood: -6391320.566014
EM: Round [560] log likelihood: -6391320.565732
EM: Round [561] log likelihood: -6391320.565451
EM: Round [562] log likelihood: -6391320.565172
EM: Round [563] log likelihood: -6391320.564895
EM: Round [564] log likelihood: -6391320.564620
EM: Round [565] log likelihood: -6391320.564347
EM: Round [566] log likelihood: -6391320.564075
EM: Round [567] log likelihood: -6391320.563805
EM: Round [568] log likelihood: -6391320.563537
EM: Round [569] log likelihood: -6391320.563271
EM: Round [570] log likelihood: -6391320.563007
EM: Round [571] log likelihood: -6391320.562744
EM: Round [572] log likelihood: -6391320.562483
EM: Round [573] log likelihood: -6391320.562224
EM: Round [574] log likelihood: -6391320.561967
EM: Round [575] log likelihood: -6391320.561711
EM: Round [576] log likelihood: -6391320.561457
EM: Round [577] log likelihood: -6391320.561205
EM: Round [578] log likelihood: -6391320.560954
EM: Round [579] log likelihood: -6391320.560705
EM: Round [580] log likelihood: -6391320.560457
EM: Round [581] log likelihood: -6391320.560212
EM: Round [582] log likelihood: -6391320.559968
EM: Round [583] log likelihood: -6391320.559725
EM: Round [584] log likelihood: -6391320.559484
EM: Round [585] log likelihood: -6391320.559245
EM: Round [586] log likelihood: -6391320.559007
EM: Round [587] log likelihood: -6391320.558771
EM: Round [588] log likelihood: -6391320.558536
EM: Round [589] log likelihood: -6391320.558303
EM: Round [590] log likelihood: -6391320.558072
EM: Round [591] log likelihood: -6391320.557842
EM: Round [592] log likelihood: -6391320.557613
EM: Round [593] log likelihood: -6391320.557386
EM: Round [594] log likelihood: -6391320.557161
EM: Round [595] log likelihood: -6391320.556937
EM: Round [596] log likelihood: -6391320.556714
EM: Round [597] log likelihood: -6391320.556493
EM: Round [598] log likelihood: -6391320.556273
EM: Round [599] log likelihood: -6391320.556055
EM: Round [600] log likelihood: -6391320.555838
EM: Round [601] log likelihood: -6391320.555623
EM: Round [602] log likelihood: -6391320.555409
EM: Round [603] log likelihood: -6391320.555196
EM: Round [604] log likelihood: -6391320.554985
EM: Round [605] log likelihood: -6391320.554775
EM: Round [606] log likelihood: -6391320.554567
EM: Round [607] log likelihood: -6391320.554360
EM: Round [608] log likelihood: -6391320.554154
EM: Round [609] log likelihood: -6391320.553950
EM: Round [610] log likelihood: -6391320.553747
EM: Round [611] log likelihood: -6391320.553545
EM: Round [612] log likelihood: -6391320.553345
EM: Round [613] log likelihood: -6391320.553146
EM: Round [614] log likelihood: -6391320.552948
EM: Round [615] log likelihood: -6391320.552751
EM: Round [616] log likelihood: -6391320.552556
EM: Round [617] log likelihood: -6391320.552362
EM: Round [618] log likelihood: -6391320.552169
EM: Round [619] log likelihood: -6391320.551978
EM: Round [620] log likelihood: -6391320.551788
EM: Round [621] log likelihood: -6391320.551599
EM: Round [622] log likelihood: -6391320.551411
EM: Round [623] log likelihood: -6391320.551225
EM: Round [624] log likelihood: -6391320.551039
EM: Round [625] log likelihood: -6391320.550855
EM: Round [626] log likelihood: -6391320.550672
EM: Round [627] log likelihood: -6391320.550491
EM: Round [628] log likelihood: -6391320.550310
EM: Round [629] log likelihood: -6391320.550131
EM: Round [630] log likelihood: -6391320.549952
EM: Round [631] log likelihood: -6391320.549775
EM: Round [632] log likelihood: -6391320.549599
EM: Round [633] log likelihood: -6391320.549425
EM: Round [634] log likelihood: -6391320.549251
EM: Round [635] log likelihood: -6391320.549078
EM: Round [636] log likelihood: -6391320.548907
EM: Round [637] log likelihood: -6391320.548737
EM: Round [638] log likelihood: -6391320.548567
EM: Round [639] log likelihood: -6391320.548399
EM: Round [640] log likelihood: -6391320.548232
EM: Round [641] log likelihood: -6391320.548066
EM: Round [642] log likelihood: -6391320.547901
EM: Round [643] log likelihood: -6391320.547738
EM: Round [644] log likelihood: -6391320.547575
EM: Round [645] log likelihood: -6391320.547413
EM: Round [646] log likelihood: -6391320.547252
EM: Round [647] log likelihood: -6391320.547093
EM: Round [648] log likelihood: -6391320.546934
EM: Round [649] log likelihood: -6391320.546777
EM: Round [650] log likelihood: -6391320.546620
EM: Round [651] log likelihood: -6391320.546464
EM: Round [652] log likelihood: -6391320.546310
EM: Round [653] log likelihood: -6391320.546156
EM: Round [654] log likelihood: -6391320.546004
EM: Round [655] log likelihood: -6391320.545852
EM: Round [656] log likelihood: -6391320.545701
EM: Round [657] log likelihood: -6391320.545552
EM: Round [658] log likelihood: -6391320.545403
EM: Round [659] log likelihood: -6391320.545255
EM: Round [660] log likelihood: -6391320.545108
EM: Round [661] log likelihood: -6391320.544962
EM: Round [662] log likelihood: -6391320.544817
EM: Round [663] log likelihood: -6391320.544673
EM: Round [664] log likelihood: -6391320.544530
EM: Round [665] log likelihood: -6391320.544388
EM: Round [666] log likelihood: -6391320.544247
EM: Round [667] log likelihood: -6391320.544106
EM: Round [668] log likelihood: -6391320.543967
EM: Round [669] log likelihood: -6391320.543828
EM: Round [670] log likelihood: -6391320.543691
EM: Round [671] log likelihood: -6391320.543554
EM: Round [672] log likelihood: -6391320.543418
EM: Round [673] log likelihood: -6391320.543283
EM: Round [674] log likelihood: -6391320.543148
EM: Round [675] log likelihood: -6391320.543015
EM: Round [676] log likelihood: -6391320.542883
EM: Round [677] log likelihood: -6391320.542751
EM: Round [678] log likelihood: -6391320.542620
EM: Round [679] log likelihood: -6391320.542490
EM: Round [680] log likelihood: -6391320.542361
EM: Round [681] log likelihood: -6391320.542232
EM: Round [682] log likelihood: -6391320.542105
EM: Round [683] log likelihood: -6391320.541978
EM: Round [684] log likelihood: -6391320.541852
EM: Round [685] log likelihood: -6391320.541727
EM: Round [686] log likelihood: -6391320.541603
EM: Round [687] log likelihood: -6391320.541479
EM: Round [688] log likelihood: -6391320.541356
EM: Round [689] log likelihood: -6391320.541234
EM: Round [690] log likelihood: -6391320.541113
EM: Round [691] log likelihood: -6391320.540993
EM: Round [692] log likelihood: -6391320.540873
EM: Round [693] log likelihood: -6391320.540754
EM: Round [694] log likelihood: -6391320.540636
EM: Round [695] log likelihood: -6391320.540518
EM: Round [696] log likelihood: -6391320.540402
EM: Round [697] log likelihood: -6391320.540286
EM: Round [698] log likelihood: -6391320.540171
EM: Round [699] log likelihood: -6391320.540056
EM: Round [700] log likelihood: -6391320.539942
EM: Round [701] log likelihood: -6391320.539829
EM: Round [702] log likelihood: -6391320.539717
EM: Round [703] log likelihood: -6391320.539605
EM: Round [704] log likelihood: -6391320.539494
EM: Round [705] log likelihood: -6391320.539384
EM: Round [706] log likelihood: -6391320.539275
EM: Round [707] log likelihood: -6391320.539166
EM: Round [708] log likelihood: -6391320.539058
EM: Round [709] log likelihood: -6391320.538950
EM: Round [710] log likelihood: -6391320.538843
EM: Round [711] log likelihood: -6391320.538737
EM: Round [712] log likelihood: -6391320.538632
EM: Round [713] log likelihood: -6391320.538527
EM: Round [714] log likelihood: -6391320.538423
EM: Round [715] log likelihood: -6391320.538320
EM: Round [716] log likelihood: -6391320.538217
EM: Round [717] log likelihood: -6391320.538114
EM: Round [718] log likelihood: -6391320.538013
EM: Round [719] log likelihood: -6391320.537912
EM: Round [720] log likelihood: -6391320.537812
EM: Round [721] log likelihood: -6391320.537712
EM: Stopping iterations at round 721 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -6385084.599689
EM: Round [1] log likelihood: -6384555.374156
EM: Round [2] log likelihood: -6384388.408807
EM: Round [3] log likelihood: -6384316.283891
EM: Round [4] log likelihood: -6384279.994251
EM: Round [5] log likelihood: -6384259.940443
EM: Round [6] log likelihood: -6384248.068442
EM: Round [7] log likelihood: -6384240.611489
EM: Round [8] log likelihood: -6384235.665702
EM: Round [9] log likelihood: -6384232.217913
EM: Round [10] log likelihood: -6384229.706269
EM: Round [11] log likelihood: -6384227.806842
EM: Round [12] log likelihood: -6384226.325300
EM: Round [13] log likelihood: -6384225.140195
EM: Round [14] log likelihood: -6384224.172515
EM: Round [15] log likelihood: -6384223.368875
EM: Round [16] log likelihood: -6384222.691968
EM: Round [17] log likelihood: -6384222.114939
EM: Round [18] log likelihood: -6384221.617963
EM: Round [19] log likelihood: -6384221.186087
EM: Round [20] log likelihood: -6384220.807819
EM: Round [21] log likelihood: -6384220.474188
EM: Round [22] log likelihood: -6384220.178092
EM: Round [23] log likelihood: -6384219.913837
EM: Round [24] log likelihood: -6384219.676809
EM: Round [25] log likelihood: -6384219.463231
EM: Round [26] log likelihood: -6384219.269984
EM: Round [27] log likelihood: -6384219.094469
EM: Round [28] log likelihood: -6384218.934504
EM: Round [29] log likelihood: -6384218.788245
EM: Round [30] log likelihood: -6384218.654122
EM: Round [31] log likelihood: -6384218.530792
EM: Round [32] log likelihood: -6384218.417099
EM: Round [33] log likelihood: -6384218.312040
EM: Round [34] log likelihood: -6384218.214744
EM: Round [35] log likelihood: -6384218.124451
EM: Round [36] log likelihood: -6384218.040491
EM: Round [37] log likelihood: -6384217.962276
EM: Round [38] log likelihood: -6384217.889286
EM: Round [39] log likelihood: -6384217.821058
EM: Round [40] log likelihood: -6384217.757180
EM: Round [41] log likelihood: -6384217.697286
EM: Round [42] log likelihood: -6384217.641044
EM: Round [43] log likelihood: -6384217.588160
EM: Round [44] log likelihood: -6384217.538367
EM: Round [45] log likelihood: -6384217.491424
EM: Round [46] log likelihood: -6384217.447114
EM: Round [47] log likelihood: -6384217.405239
EM: Round [48] log likelihood: -6384217.365619
EM: Round [49] log likelihood: -6384217.328092
EM: Round [50] log likelihood: -6384217.292508
EM: Round [51] log likelihood: -6384217.258731
EM: Round [52] log likelihood: -6384217.226637
EM: Round [53] log likelihood: -6384217.196111
EM: Round [54] log likelihood: -6384217.167048
EM: Round [55] log likelihood: -6384217.139353
EM: Round [56] log likelihood: -6384217.112936
EM: Round [57] log likelihood: -6384217.087716
EM: Round [58] log likelihood: -6384217.063617
EM: Round [59] log likelihood: -6384217.040570
EM: Round [60] log likelihood: -6384217.018510
EM: Round [61] log likelihood: -6384216.997377
EM: Round [62] log likelihood: -6384216.977117
EM: Round [63] log likelihood: -6384216.957677
EM: Round [64] log likelihood: -6384216.939010
EM: Round [65] log likelihood: -6384216.921072
EM: Round [66] log likelihood: -6384216.903822
EM: Round [67] log likelihood: -6384216.887221
EM: Round [68] log likelihood: -6384216.871234
EM: Round [69] log likelihood: -6384216.855827
EM: Round [70] log likelihood: -6384216.840968
EM: Round [71] log likelihood: -6384216.826630
EM: Round [72] log likelihood: -6384216.812784
EM: Round [73] log likelihood: -6384216.799405
EM: Round [74] log likelihood: -6384216.786470
EM: Round [75] log likelihood: -6384216.773956
EM: Round [76] log likelihood: -6384216.761842
EM: Round [77] log likelihood: -6384216.750108
EM: Round [78] log likelihood: -6384216.738737
EM: Round [79] log likelihood: -6384216.727710
EM: Round [80] log likelihood: -6384216.717012
EM: Round [81] log likelihood: -6384216.706627
EM: Round [82] log likelihood: -6384216.696541
EM: Round [83] log likelihood: -6384216.686740
EM: Round [84] log likelihood: -6384216.677212
EM: Round [85] log likelihood: -6384216.667944
EM: Round [86] log likelihood: -6384216.658925
EM: Round [87] log likelihood: -6384216.650144
EM: Round [88] log likelihood: -6384216.641591
EM: Round [89] log likelihood: -6384216.633257
EM: Round [90] log likelihood: -6384216.625133
EM: Round [91] log likelihood: -6384216.617209
EM: Round [92] log likelihood: -6384216.609478
EM: Round [93] log likelihood: -6384216.601932
EM: Round [94] log likelihood: -6384216.594564
EM: Round [95] log likelihood: -6384216.587367
EM: Round [96] log likelihood: -6384216.580334
EM: Round [97] log likelihood: -6384216.573460
EM: Round [98] log likelihood: -6384216.566737
EM: Round [99] log likelihood: -6384216.560162
EM: Round [100] log likelihood: -6384216.553727
EM: Round [101] log likelihood: -6384216.547429
EM: Round [102] log likelihood: -6384216.541262
EM: Round [103] log likelihood: -6384216.535222
EM: Round [104] log likelihood: -6384216.529305
EM: Round [105] log likelihood: -6384216.523505
EM: Round [106] log likelihood: -6384216.517820
EM: Round [107] log likelihood: -6384216.512245
EM: Round [108] log likelihood: -6384216.506777
EM: Round [109] log likelihood: -6384216.501413
EM: Round [110] log likelihood: -6384216.496148
EM: Round [111] log likelihood: -6384216.490981
EM: Round [112] log likelihood: -6384216.485907
EM: Round [113] log likelihood: -6384216.480924
EM: Round [114] log likelihood: -6384216.476030
EM: Round [115] log likelihood: -6384216.471221
EM: Round [116] log likelihood: -6384216.466495
EM: Round [117] log likelihood: -6384216.461850
EM: Round [118] log likelihood: -6384216.457283
EM: Round [119] log likelihood: -6384216.452792
EM: Round [120] log likelihood: -6384216.448375
EM: Round [121] log likelihood: -6384216.444029
EM: Round [122] log likelihood: -6384216.439754
EM: Round [123] log likelihood: -6384216.435546
EM: Round [124] log likelihood: -6384216.431405
EM: Round [125] log likelihood: -6384216.427328
EM: Round [126] log likelihood: -6384216.423314
EM: Round [127] log likelihood: -6384216.419360
EM: Round [128] log likelihood: -6384216.415466
EM: Round [129] log likelihood: -6384216.411630
EM: Round [130] log likelihood: -6384216.407851
EM: Round [131] log likelihood: -6384216.404126
EM: Round [132] log likelihood: -6384216.400456
EM: Round [133] log likelihood: -6384216.396837
EM: Round [134] log likelihood: -6384216.393270
EM: Round [135] log likelihood: -6384216.389753
EM: Round [136] log likelihood: -6384216.386285
EM: Round [137] log likelihood: -6384216.382864
EM: Round [138] log likelihood: -6384216.379490
EM: Round [139] log likelihood: -6384216.376162
EM: Round [140] log likelihood: -6384216.372877
EM: Round [141] log likelihood: -6384216.369637
EM: Round [142] log likelihood: -6384216.366438
EM: Round [143] log likelihood: -6384216.363282
EM: Round [144] log likelihood: -6384216.360166
EM: Round [145] log likelihood: -6384216.357090
EM: Round [146] log likelihood: -6384216.354053
EM: Round [147] log likelihood: -6384216.351054
EM: Round [148] log likelihood: -6384216.348092
EM: Round [149] log likelihood: -6384216.345167
EM: Round [150] log likelihood: -6384216.342278
EM: Round [151] log likelihood: -6384216.339424
EM: Round [152] log likelihood: -6384216.336605
EM: Round [153] log likelihood: -6384216.333819
EM: Round [154] log likelihood: -6384216.331066
EM: Round [155] log likelihood: -6384216.328346
EM: Round [156] log likelihood: -6384216.325657
EM: Round [157] log likelihood: -6384216.323000
EM: Round [158] log likelihood: -6384216.320373
EM: Round [159] log likelihood: -6384216.317776
EM: Round [160] log likelihood: -6384216.315209
EM: Round [161] log likelihood: -6384216.312671
EM: Round [162] log likelihood: -6384216.310161
EM: Round [163] log likelihood: -6384216.307679
EM: Round [164] log likelihood: -6384216.305225
EM: Round [165] log likelihood: -6384216.302797
EM: Round [166] log likelihood: -6384216.300396
EM: Round [167] log likelihood: -6384216.298021
EM: Round [168] log likelihood: -6384216.295671
EM: Round [169] log likelihood: -6384216.293347
EM: Round [170] log likelihood: -6384216.291047
EM: Round [171] log likelihood: -6384216.288771
EM: Round [172] log likelihood: -6384216.286519
EM: Round [173] log likelihood: -6384216.284291
EM: Round [174] log likelihood: -6384216.282085
EM: Round [175] log likelihood: -6384216.279903
EM: Round [176] log likelihood: -6384216.277742
EM: Round [177] log likelihood: -6384216.275604
EM: Round [178] log likelihood: -6384216.273487
EM: Round [179] log likelihood: -6384216.271391
EM: Round [180] log likelihood: -6384216.269316
EM: Round [181] log likelihood: -6384216.267262
EM: Round [182] log likelihood: -6384216.265228
EM: Round [183] log likelihood: -6384216.263215
EM: Round [184] log likelihood: -6384216.261220
EM: Round [185] log likelihood: -6384216.259245
EM: Round [186] log likelihood: -6384216.257290
EM: Round [187] log likelihood: -6384216.255352
EM: Round [188] log likelihood: -6384216.253434
EM: Round [189] log likelihood: -6384216.251534
EM: Round [190] log likelihood: -6384216.249651
EM: Round [191] log likelihood: -6384216.247786
EM: Round [192] log likelihood: -6384216.245939
EM: Round [193] log likelihood: -6384216.244109
EM: Round [194] log likelihood: -6384216.242296
EM: Round [195] log likelihood: -6384216.240500
EM: Round [196] log likelihood: -6384216.238720
EM: Round [197] log likelihood: -6384216.236956
EM: Round [198] log likelihood: -6384216.235208
EM: Round [199] log likelihood: -6384216.233476
EM: Round [200] log likelihood: -6384216.231760
EM: Round [201] log likelihood: -6384216.230059
EM: Round [202] log likelihood: -6384216.228373
EM: Round [203] log likelihood: -6384216.226702
EM: Round [204] log likelihood: -6384216.225046
EM: Round [205] log likelihood: -6384216.223405
EM: Round [206] log likelihood: -6384216.221778
EM: Round [207] log likelihood: -6384216.220165
EM: Round [208] log likelihood: -6384216.218566
EM: Round [209] log likelihood: -6384216.216981
EM: Round [210] log likelihood: -6384216.215409
EM: Round [211] log likelihood: -6384216.213851
EM: Round [212] log likelihood: -6384216.212307
EM: Round [213] log likelihood: -6384216.210775
EM: Round [214] log likelihood: -6384216.209256
EM: Round [215] log likelihood: -6384216.207751
EM: Round [216] log likelihood: -6384216.206258
EM: Round [217] log likelihood: -6384216.204777
EM: Round [218] log likelihood: -6384216.203309
EM: Round [219] log likelihood: -6384216.201853
EM: Round [220] log likelihood: -6384216.200409
EM: Round [221] log likelihood: -6384216.198976
EM: Round [222] log likelihood: -6384216.197556
EM: Round [223] log likelihood: -6384216.196147
EM: Round [224] log likelihood: -6384216.194750
EM: Round [225] log likelihood: -6384216.193364
EM: Round [226] log likelihood: -6384216.191990
EM: Round [227] log likelihood: -6384216.190626
EM: Round [228] log likelihood: -6384216.189273
EM: Round [229] log likelihood: -6384216.187932
EM: Round [230] log likelihood: -6384216.186601
EM: Round [231] log likelihood: -6384216.185280
EM: Round [232] log likelihood: -6384216.183970
EM: Round [233] log likelihood: -6384216.182671
EM: Round [234] log likelihood: -6384216.181381
EM: Round [235] log likelihood: -6384216.180102
EM: Round [236] log likelihood: -6384216.178833
EM: Round [237] log likelihood: -6384216.177574
EM: Round [238] log likelihood: -6384216.176324
EM: Round [239] log likelihood: -6384216.175084
EM: Round [240] log likelihood: -6384216.173854
EM: Round [241] log likelihood: -6384216.172633
EM: Round [242] log likelihood: -6384216.171422
EM: Round [243] log likelihood: -6384216.170220
EM: Round [244] log likelihood: -6384216.169027
EM: Round [245] log likelihood: -6384216.167844
EM: Round [246] log likelihood: -6384216.166669
EM: Round [247] log likelihood: -6384216.165503
EM: Round [248] log likelihood: -6384216.164346
EM: Round [249] log likelihood: -6384216.163198
EM: Round [250] log likelihood: -6384216.162058
EM: Round [251] log likelihood: -6384216.160927
EM: Round [252] log likelihood: -6384216.159805
EM: Round [253] log likelihood: -6384216.158690
EM: Round [254] log likelihood: -6384216.157585
EM: Round [255] log likelihood: -6384216.156487
EM: Round [256] log likelihood: -6384216.155397
EM: Round [257] log likelihood: -6384216.154316
EM: Round [258] log likelihood: -6384216.153242
EM: Round [259] log likelihood: -6384216.152177
EM: Round [260] log likelihood: -6384216.151119
EM: Round [261] log likelihood: -6384216.150069
EM: Round [262] log likelihood: -6384216.149026
EM: Round [263] log likelihood: -6384216.147992
EM: Round [264] log likelihood: -6384216.146964
EM: Round [265] log likelihood: -6384216.145945
EM: Round [266] log likelihood: -6384216.144932
EM: Round [267] log likelihood: -6384216.143927
EM: Round [268] log likelihood: -6384216.142929
EM: Round [269] log likelihood: -6384216.141938
EM: Round [270] log likelihood: -6384216.140955
EM: Round [271] log likelihood: -6384216.139978
EM: Round [272] log likelihood: -6384216.139009
EM: Round [273] log likelihood: -6384216.138046
EM: Round [274] log likelihood: -6384216.137090
EM: Round [275] log likelihood: -6384216.136141
EM: Round [276] log likelihood: -6384216.135199
EM: Round [277] log likelihood: -6384216.134263
EM: Round [278] log likelihood: -6384216.133334
EM: Round [279] log likelihood: -6384216.132412
EM: Round [280] log likelihood: -6384216.131496
EM: Round [281] log likelihood: -6384216.130586
EM: Round [282] log likelihood: -6384216.129683
EM: Round [283] log likelihood: -6384216.128786
EM: Round [284] log likelihood: -6384216.127895
EM: Round [285] log likelihood: -6384216.127011
EM: Round [286] log likelihood: -6384216.126133
EM: Round [287] log likelihood: -6384216.125261
EM: Round [288] log likelihood: -6384216.124394
EM: Round [289] log likelihood: -6384216.123534
EM: Round [290] log likelihood: -6384216.122680
EM: Round [291] log likelihood: -6384216.121832
EM: Round [292] log likelihood: -6384216.120989
EM: Round [293] log likelihood: -6384216.120153
EM: Round [294] log likelihood: -6384216.119322
EM: Round [295] log likelihood: -6384216.118497
EM: Round [296] log likelihood: -6384216.117677
EM: Round [297] log likelihood: -6384216.116863
EM: Round [298] log likelihood: -6384216.116055
EM: Round [299] log likelihood: -6384216.115252
EM: Round [300] log likelihood: -6384216.114454
EM: Round [301] log likelihood: -6384216.113662
EM: Round [302] log likelihood: -6384216.112875
EM: Round [303] log likelihood: -6384216.112094
EM: Round [304] log likelihood: -6384216.111318
EM: Round [305] log likelihood: -6384216.110547
EM: Round [306] log likelihood: -6384216.109781
EM: Round [307] log likelihood: -6384216.109021
EM: Round [308] log likelihood: -6384216.108266
EM: Round [309] log likelihood: -6384216.107515
EM: Round [310] log likelihood: -6384216.106770
EM: Round [311] log likelihood: -6384216.106030
EM: Round [312] log likelihood: -6384216.105294
EM: Round [313] log likelihood: -6384216.104564
EM: Round [314] log likelihood: -6384216.103838
EM: Round [315] log likelihood: -6384216.103118
EM: Round [316] log likelihood: -6384216.102402
EM: Round [317] log likelihood: -6384216.101690
EM: Round [318] log likelihood: -6384216.100984
EM: Round [319] log likelihood: -6384216.100282
EM: Round [320] log likelihood: -6384216.099585
EM: Round [321] log likelihood: -6384216.098892
EM: Round [322] log likelihood: -6384216.098205
EM: Round [323] log likelihood: -6384216.097521
EM: Round [324] log likelihood: -6384216.096842
EM: Round [325] log likelihood: -6384216.096168
EM: Round [326] log likelihood: -6384216.095498
EM: Round [327] log likelihood: -6384216.094832
EM: Round [328] log likelihood: -6384216.094171
EM: Round [329] log likelihood: -6384216.093514
EM: Round [330] log likelihood: -6384216.092861
EM: Round [331] log likelihood: -6384216.092213
EM: Round [332] log likelihood: -6384216.091569
EM: Round [333] log likelihood: -6384216.090929
EM: Round [334] log likelihood: -6384216.090293
EM: Round [335] log likelihood: -6384216.089661
EM: Round [336] log likelihood: -6384216.089034
EM: Round [337] log likelihood: -6384216.088410
EM: Round [338] log likelihood: -6384216.087791
EM: Round [339] log likelihood: -6384216.087175
EM: Round [340] log likelihood: -6384216.086564
EM: Round [341] log likelihood: -6384216.085956
EM: Round [342] log likelihood: -6384216.085353
EM: Round [343] log likelihood: -6384216.084753
EM: Round [344] log likelihood: -6384216.084157
EM: Round [345] log likelihood: -6384216.083565
EM: Round [346] log likelihood: -6384216.082977
EM: Round [347] log likelihood: -6384216.082393
EM: Round [348] log likelihood: -6384216.081812
EM: Round [349] log likelihood: -6384216.081236
EM: Round [350] log likelihood: -6384216.080662
EM: Round [351] log likelihood: -6384216.080093
EM: Round [352] log likelihood: -6384216.079527
EM: Round [353] log likelihood: -6384216.078965
EM: Round [354] log likelihood: -6384216.078406
EM: Round [355] log likelihood: -6384216.077851
EM: Round [356] log likelihood: -6384216.077299
EM: Round [357] log likelihood: -6384216.076751
EM: Round [358] log likelihood: -6384216.076207
EM: Round [359] log likelihood: -6384216.075666
EM: Round [360] log likelihood: -6384216.075128
EM: Round [361] log likelihood: -6384216.074594
EM: Round [362] log likelihood: -6384216.074063
EM: Round [363] log likelihood: -6384216.073536
EM: Round [364] log likelihood: -6384216.073012
EM: Round [365] log likelihood: -6384216.072491
EM: Round [366] log likelihood: -6384216.071973
EM: Round [367] log likelihood: -6384216.071459
EM: Round [368] log likelihood: -6384216.070948
EM: Round [369] log likelihood: -6384216.070440
EM: Round [370] log likelihood: -6384216.069936
EM: Round [371] log likelihood: -6384216.069435
EM: Round [372] log likelihood: -6384216.068936
EM: Round [373] log likelihood: -6384216.068441
EM: Round [374] log likelihood: -6384216.067949
EM: Round [375] log likelihood: -6384216.067461
EM: Round [376] log likelihood: -6384216.066975
EM: Round [377] log likelihood: -6384216.066492
EM: Round [378] log likelihood: -6384216.066012
EM: Round [379] log likelihood: -6384216.065536
EM: Round [380] log likelihood: -6384216.065062
EM: Round [381] log likelihood: -6384216.064591
EM: Round [382] log likelihood: -6384216.064123
EM: Round [383] log likelihood: -6384216.063659
EM: Round [384] log likelihood: -6384216.063197
EM: Round [385] log likelihood: -6384216.062738
EM: Round [386] log likelihood: -6384216.062281
EM: Round [387] log likelihood: -6384216.061828
EM: Round [388] log likelihood: -6384216.061377
EM: Round [389] log likelihood: -6384216.060930
EM: Round [390] log likelihood: -6384216.060485
EM: Round [391] log likelihood: -6384216.060043
EM: Round [392] log likelihood: -6384216.059603
EM: Round [393] log likelihood: -6384216.059167
EM: Round [394] log likelihood: -6384216.058733
EM: Round [395] log likelihood: -6384216.058301
EM: Round [396] log likelihood: -6384216.057873
EM: Round [397] log likelihood: -6384216.057447
EM: Round [398] log likelihood: -6384216.057023
EM: Round [399] log likelihood: -6384216.056603
EM: Round [400] log likelihood: -6384216.056185
EM: Round [401] log likelihood: -6384216.055769
EM: Round [402] log likelihood: -6384216.055356
EM: Round [403] log likelihood: -6384216.054946
EM: Round [404] log likelihood: -6384216.054538
EM: Round [405] log likelihood: -6384216.054133
EM: Round [406] log likelihood: -6384216.053730
EM: Round [407] log likelihood: -6384216.053329
EM: Round [408] log likelihood: -6384216.052932
EM: Round [409] log likelihood: -6384216.052536
EM: Round [410] log likelihood: -6384216.052143
EM: Round [411] log likelihood: -6384216.051753
EM: Round [412] log likelihood: -6384216.051364
EM: Round [413] log likelihood: -6384216.050979
EM: Round [414] log likelihood: -6384216.050595
EM: Round [415] log likelihood: -6384216.050214
EM: Round [416] log likelihood: -6384216.049835
EM: Round [417] log likelihood: -6384216.049459
EM: Round [418] log likelihood: -6384216.049085
EM: Round [419] log likelihood: -6384216.048713
EM: Round [420] log likelihood: -6384216.048344
EM: Round [421] log likelihood: -6384216.047976
EM: Round [422] log likelihood: -6384216.047611
EM: Round [423] log likelihood: -6384216.047249
EM: Round [424] log likelihood: -6384216.046888
EM: Round [425] log likelihood: -6384216.046530
EM: Round [426] log likelihood: -6384216.046174
EM: Round [427] log likelihood: -6384216.045820
EM: Round [428] log likelihood: -6384216.045468
EM: Round [429] log likelihood: -6384216.045118
EM: Round [430] log likelihood: -6384216.044771
EM: Round [431] log likelihood: -6384216.044425
EM: Round [432] log likelihood: -6384216.044082
EM: Round [433] log likelihood: -6384216.043741
EM: Round [434] log likelihood: -6384216.043402
EM: Round [435] log likelihood: -6384216.043064
EM: Round [436] log likelihood: -6384216.042729
EM: Round [437] log likelihood: -6384216.042396
EM: Round [438] log likelihood: -6384216.042065
EM: Round [439] log likelihood: -6384216.041736
EM: Round [440] log likelihood: -6384216.041409
EM: Round [441] log likelihood: -6384216.041085
EM: Round [442] log likelihood: -6384216.040762
EM: Round [443] log likelihood: -6384216.040440
EM: Round [444] log likelihood: -6384216.040121
EM: Round [445] log likelihood: -6384216.039804
EM: Round [446] log likelihood: -6384216.039489
EM: Round [447] log likelihood: -6384216.039176
EM: Round [448] log likelihood: -6384216.038864
EM: Round [449] log likelihood: -6384216.038555
EM: Round [450] log likelihood: -6384216.038247
EM: Round [451] log likelihood: -6384216.037941
EM: Round [452] log likelihood: -6384216.037637
EM: Round [453] log likelihood: -6384216.037335
EM: Round [454] log likelihood: -6384216.037035
EM: Round [455] log likelihood: -6384216.036736
EM: Round [456] log likelihood: -6384216.036440
EM: Round [457] log likelihood: -6384216.036145
EM: Round [458] log likelihood: -6384216.035852
EM: Round [459] log likelihood: -6384216.035560
EM: Round [460] log likelihood: -6384216.035271
EM: Round [461] log likelihood: -6384216.034983
EM: Round [462] log likelihood: -6384216.034697
EM: Round [463] log likelihood: -6384216.034412
EM: Round [464] log likelihood: -6384216.034129
EM: Round [465] log likelihood: -6384216.033848
EM: Round [466] log likelihood: -6384216.033569
EM: Round [467] log likelihood: -6384216.033292
EM: Round [468] log likelihood: -6384216.033016
EM: Round [469] log likelihood: -6384216.032741
EM: Round [470] log likelihood: -6384216.032469
EM: Round [471] log likelihood: -6384216.032198
EM: Round [472] log likelihood: -6384216.031928
EM: Round [473] log likelihood: -6384216.031661
EM: Round [474] log likelihood: -6384216.031394
EM: Round [475] log likelihood: -6384216.031130
EM: Round [476] log likelihood: -6384216.030867
EM: Round [477] log likelihood: -6384216.030606
EM: Round [478] log likelihood: -6384216.030346
EM: Round [479] log likelihood: -6384216.030087
EM: Round [480] log likelihood: -6384216.029831
EM: Round [481] log likelihood: -6384216.029576
EM: Round [482] log likelihood: -6384216.029322
EM: Round [483] log likelihood: -6384216.029070
EM: Round [484] log likelihood: -6384216.028819
EM: Round [485] log likelihood: -6384216.028570
EM: Round [486] log likelihood: -6384216.028322
EM: Round [487] log likelihood: -6384216.028076
EM: Round [488] log likelihood: -6384216.027831
EM: Round [489] log likelihood: -6384216.027588
EM: Round [490] log likelihood: -6384216.027346
EM: Round [491] log likelihood: -6384216.027106
EM: Round [492] log likelihood: -6384216.026867
EM: Round [493] log likelihood: -6384216.026630
EM: Round [494] log likelihood: -6384216.026394
EM: Round [495] log likelihood: -6384216.026159
EM: Round [496] log likelihood: -6384216.025926
EM: Round [497] log likelihood: -6384216.025694
EM: Round [498] log likelihood: -6384216.025463
EM: Round [499] log likelihood: -6384216.025234
EM: Round [500] log likelihood: -6384216.025007
EM: Round [501] log likelihood: -6384216.024780
EM: Round [502] log likelihood: -6384216.024555
EM: Round [503] log likelihood: -6384216.024331
EM: Round [504] log likelihood: -6384216.024109
EM: Round [505] log likelihood: -6384216.023888
EM: Round [506] log likelihood: -6384216.023668
EM: Round [507] log likelihood: -6384216.023450
EM: Round [508] log likelihood: -6384216.023233
EM: Round [509] log likelihood: -6384216.023017
EM: Round [510] log likelihood: -6384216.022802
EM: Round [511] log likelihood: -6384216.022589
EM: Round [512] log likelihood: -6384216.022377
EM: Round [513] log likelihood: -6384216.022166
EM: Round [514] log likelihood: -6384216.021957
EM: Round [515] log likelihood: -6384216.021749
EM: Round [516] log likelihood: -6384216.021542
EM: Round [517] log likelihood: -6384216.021336
EM: Round [518] log likelihood: -6384216.021131
EM: Round [519] log likelihood: -6384216.020928
EM: Round [520] log likelihood: -6384216.020726
EM: Round [521] log likelihood: -6384216.020525
EM: Round [522] log likelihood: -6384216.020325
EM: Round [523] log likelihood: -6384216.020126
EM: Round [524] log likelihood: -6384216.019929
EM: Round [525] log likelihood: -6384216.019733
EM: Round [526] log likelihood: -6384216.019538
EM: Round [527] log likelihood: -6384216.019344
EM: Round [528] log likelihood: -6384216.019151
EM: Round [529] log likelihood: -6384216.018959
EM: Round [530] log likelihood: -6384216.018769
EM: Round [531] log likelihood: -6384216.018579
EM: Round [532] log likelihood: -6384216.018391
EM: Round [533] log likelihood: -6384216.018204
EM: Round [534] log likelihood: -6384216.018018
EM: Round [535] log likelihood: -6384216.017833
EM: Round [536] log likelihood: -6384216.017649
EM: Round [537] log likelihood: -6384216.017466
EM: Round [538] log likelihood: -6384216.017285
EM: Round [539] log likelihood: -6384216.017104
EM: Round [540] log likelihood: -6384216.016924
EM: Round [541] log likelihood: -6384216.016746
EM: Round [542] log likelihood: -6384216.016568
EM: Round [543] log likelihood: -6384216.016392
EM: Round [544] log likelihood: -6384216.016217
EM: Round [545] log likelihood: -6384216.016042
EM: Round [546] log likelihood: -6384216.015869
EM: Round [547] log likelihood: -6384216.015697
EM: Round [548] log likelihood: -6384216.015526
EM: Round [549] log likelihood: -6384216.015355
EM: Round [550] log likelihood: -6384216.015186
EM: Round [551] log likelihood: -6384216.015018
EM: Round [552] log likelihood: -6384216.014851
EM: Round [553] log likelihood: -6384216.014684
EM: Round [554] log likelihood: -6384216.014519
EM: Round [555] log likelihood: -6384216.014355
EM: Round [556] log likelihood: -6384216.014191
EM: Round [557] log likelihood: -6384216.014029
EM: Round [558] log likelihood: -6384216.013867
EM: Round [559] log likelihood: -6384216.013707
EM: Round [560] log likelihood: -6384216.013547
EM: Round [561] log likelihood: -6384216.013389
EM: Round [562] log likelihood: -6384216.013231
EM: Round [563] log likelihood: -6384216.013074
EM: Round [564] log likelihood: -6384216.012919
EM: Round [565] log likelihood: -6384216.012764
EM: Round [566] log likelihood: -6384216.012610
EM: Round [567] log likelihood: -6384216.012457
EM: Round [568] log likelihood: -6384216.012304
EM: Round [569] log likelihood: -6384216.012153
EM: Round [570] log likelihood: -6384216.012003
EM: Round [571] log likelihood: -6384216.011853
EM: Round [572] log likelihood: -6384216.011704
EM: Round [573] log likelihood: -6384216.011557
EM: Round [574] log likelihood: -6384216.011410
EM: Round [575] log likelihood: -6384216.011264
EM: Round [576] log likelihood: -6384216.011118
EM: Round [577] log likelihood: -6384216.010974
EM: Round [578] log likelihood: -6384216.010831
EM: Round [579] log likelihood: -6384216.010688
EM: Round [580] log likelihood: -6384216.010546
EM: Round [581] log likelihood: -6384216.010405
EM: Round [582] log likelihood: -6384216.010265
EM: Round [583] log likelihood: -6384216.010125
EM: Round [584] log likelihood: -6384216.009987
EM: Round [585] log likelihood: -6384216.009849
EM: Round [586] log likelihood: -6384216.009712
EM: Round [587] log likelihood: -6384216.009576
EM: Round [588] log likelihood: -6384216.009441
EM: Round [589] log likelihood: -6384216.009306
EM: Round [590] log likelihood: -6384216.009173
EM: Round [591] log likelihood: -6384216.009040
EM: Round [592] log likelihood: -6384216.008907
EM: Round [593] log likelihood: -6384216.008776
EM: Round [594] log likelihood: -6384216.008645
EM: Round [595] log likelihood: -6384216.008515
EM: Round [596] log likelihood: -6384216.008386
EM: Round [597] log likelihood: -6384216.008258
EM: Round [598] log likelihood: -6384216.008130
EM: Round [599] log likelihood: -6384216.008003
EM: Round [600] log likelihood: -6384216.007877
EM: Round [601] log likelihood: -6384216.007752
EM: Round [602] log likelihood: -6384216.007627
EM: Round [603] log likelihood: -6384216.007503
EM: Round [604] log likelihood: -6384216.007380
EM: Round [605] log likelihood: -6384216.007258
EM: Round [606] log likelihood: -6384216.007136
EM: Round [607] log likelihood: -6384216.007015
EM: Round [608] log likelihood: -6384216.006894
EM: Round [609] log likelihood: -6384216.006775
EM: Round [610] log likelihood: -6384216.006656
EM: Round [611] log likelihood: -6384216.006537
EM: Round [612] log likelihood: -6384216.006420
EM: Round [613] log likelihood: -6384216.006303
EM: Round [614] log likelihood: -6384216.006187
EM: Round [615] log likelihood: -6384216.006071
EM: Round [616] log likelihood: -6384216.005956
EM: Round [617] log likelihood: -6384216.005842
EM: Round [618] log likelihood: -6384216.005729
EM: Round [619] log likelihood: -6384216.005616
EM: Round [620] log likelihood: -6384216.005504
EM: Round [621] log likelihood: -6384216.005392
EM: Round [622] log likelihood: -6384216.005281
EM: Round [623] log likelihood: -6384216.005171
EM: Round [624] log likelihood: -6384216.005061
EM: Round [625] log likelihood: -6384216.004952
EM: Round [626] log likelihood: -6384216.004844
EM: Round [627] log likelihood: -6384216.004736
EM: Round [628] log likelihood: -6384216.004629
EM: Round [629] log likelihood: -6384216.004523
EM: Round [630] log likelihood: -6384216.004417
EM: Round [631] log likelihood: -6384216.004311
EM: Round [632] log likelihood: -6384216.004207
EM: Round [633] log likelihood: -6384216.004103
EM: Round [634] log likelihood: -6384216.003999
EM: Round [635] log likelihood: -6384216.003897
EM: Round [636] log likelihood: -6384216.003794
EM: Round [637] log likelihood: -6384216.003693
EM: Round [638] log likelihood: -6384216.003592
EM: Round [639] log likelihood: -6384216.003491
EM: Round [640] log likelihood: -6384216.003391
EM: Stopping iterations at round 640 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.vP1D3iwCej/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.vP1D3iwCej/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.vP1D3iwCej/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 294346551 > /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.vP1D3iwCej/ctat_genome_lib_build_dir > /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.vP1D3iwCej/ctat_genome_lib_build_dir --annotate /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.vP1D3iwCej/ctat_genome_lib_build_dir
-done, see /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.vP1D3iwCej/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 440, filtered: 2424)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.vP1D3iwCej/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.vP1D3iwCej/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000286883.1]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000248618.1]
WARNING, no entry stored in dbm for [ENSG00000268163.1]
WARNING, no entry stored in dbm for [ENSG00000236754.5]
WARNING, no entry stored in dbm for [ENSG00000267698.1]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]


	* STAR-Fusion complete.  See output: /tmp/nxf.vP1D3iwCej/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)