-ctat genome lib [/tmp/nxf.wPhYkeOZ69/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.wPhYkeOZ69/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary -sample contains 172844936 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.wPhYkeOZ69/ctat_genome_lib_build_dir -J /tmp/nxf.wPhYkeOZ69/1173_CH0_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction -O /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.wPhYkeOZ69/1173_CH0_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction -building interval tree based on /tmp/nxf.wPhYkeOZ69/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=80000.00/min [30000], rate=85714.29/min [40000], rate=88888.89/min [50000], rate=93750.00/min [60000], rate=97297.30/min [70000], rate=93333.33/min [80000], rate=84210.53/min [90000], rate=78260.87/min [100000], rate=75949.37/min [110000], rate=73333.33/min [120000], rate=72000.00/min [130000], rate=70909.09/min [140000], rate=70588.24/min [150000], rate=70312.50/min [160000], rate=70588.24/min [170000], rate=70833.33/min [180000], rate=71523.18/min [190000], rate=72151.90/min [200000], rate=72727.27/min [210000], rate=74117.65/min [220000], rate=74576.27/min [230000], rate=75824.18/min [240000], rate=75789.47/min [250000], rate=75000.00/min [260000], rate=73584.91/min [270000], rate=72645.74/min [280000], rate=71794.87/min [290000], rate=70731.71/min [300000], rate=70312.50/min [310000], rate=69924.81/min [320000], rate=69565.22/min [330000], rate=69473.68/min [340000], rate=69624.57/min [350000], rate=69536.42/min [360000], rate=69677.42/min [370000], rate=69811.32/min [380000], rate=70153.85/min [390000], rate=70481.93/min [400000], rate=71005.92/min [410000], rate=71304.35/min [420000], rate=71794.87/min [430000], rate=71866.30/min [440000], rate=72131.15/min [450000], rate=72386.06/min [460000], rate=72823.22/min [470000], rate=73246.75/min [480000], rate=73657.29/min [490000], rate=74242.42/min [500000], rate=74812.97/min [510000], rate=75369.46/min [520000], rate=74820.14/min [530000], rate=74125.87/min [540000], rate=73636.36/min [550000], rate=73170.73/min [560000], rate=72727.27/min [570000], rate=72611.46/min [580000], rate=72349.27/min [590000], rate=72097.76/min [600000], rate=72000.00/min [610000], rate=71624.27/min [620000], rate=71401.15/min [630000], rate=71186.44/min [640000], rate=70848.71/min [650000], rate=70652.17/min [660000], rate=70462.63/min [670000], rate=70402.80/min [680000], rate=70344.83/min [690000], rate=70288.62/min [700000], rate=70234.11/min [710000], rate=70181.22/min [720000], rate=70129.87/min [730000], rate=70304.98/min [740000], rate=70364.50/min [750000], rate=70532.92/min [760000], rate=71028.04/min [770000], rate=71296.30/min [780000], rate=71450.38/min [790000], rate=71601.21/min [800000], rate=71748.88/min [810000], rate=72000.00/min [820000], rate=72352.94/min [830000], rate=72700.73/min [840000], rate=72937.77/min [850000], rate=72546.23/min [860000], rate=72067.04/min [870000], rate=71506.85/min [880000], rate=71063.26/min [890000], rate=70634.92/min [900000], rate=70404.17/min [910000], rate=70000.00/min [920000], rate=69873.42/min [930000], rate=69576.06/min [940000], rate=69287.47/min [950000], rate=69090.91/min [960000], rate=68899.52/min [970000], rate=68875.74/min [980000], rate=68852.46/min [990000], rate=68750.00/min [1000000], rate=68649.89/min [1010000], rate=68707.48/min [1020000], rate=68686.87/min [1030000], rate=68514.41/min [1040000], rate=68496.16/min [1050000], rate=68403.91/min [1060000], rate=68313.64/min [1070000], rate=68297.87/min [1080000], rate=68282.40/min [1090000], rate=68267.22/min [1100000], rate=68393.78/min [1110000], rate=68448.10/min [1120000], rate=68501.53/min [1130000], rate=68554.10/min [1140000], rate=68605.82/min [1150000], rate=68656.72/min [1160000], rate=68774.70/min [1170000], rate=68891.07/min [1180000], rate=69073.17/min [1190000], rate=69253.15/min [1200000], rate=69565.22/min [1210000], rate=69942.20/min [1220000], rate=70114.94/min [1230000], rate=70285.71/min [1240000], rate=70454.55/min [1250000], rate=70224.72/min [1260000], rate=70064.87/min [1270000], rate=69908.26/min [1280000], rate=69691.47/min [1290000], rate=69541.78/min [1300000], rate=69333.33/min [1310000], rate=69190.14/min [1320000], rate=69109.95/min [1330000], rate=69031.14/min [1340000], rate=69012.88/min [1350000], rate=68994.89/min [1360000], rate=69035.53/min [1370000], rate=69133.73/min [1380000], rate=69230.77/min [1390000], rate=69326.68/min [1400000], rate=69478.91/min [1410000], rate=69686.99/min [1420000], rate=69893.36/min [1430000], rate=70155.36/min [1440000], rate=70415.65/min [1450000], rate=70616.88/min [1460000], rate=70873.79/min [1470000], rate=71071.72/min [1480000], rate=71268.06/min [1490000], rate=71405.75/min [1500000], rate=71542.13/min [1510000], rate=71563.98/min [1520000], rate=71417.38/min [1530000], rate=71218.00/min [1540000], rate=70967.74/min [1550000], rate=70722.43/min [1560000], rate=70588.24/min [1570000], rate=70508.98/min [1580000], rate=70430.91/min [1590000], rate=70353.98/min [1600000], rate=70329.67/min [1610000], rate=70305.68/min [1620000], rate=70332.85/min [1630000], rate=70359.71/min [1640000], rate=70386.27/min [1650000], rate=70462.63/min [1660000], rate=70488.32/min [1670000], rate=70513.72/min [1680000], rate=70538.84/min [1690000], rate=70563.67/min [1700000], rate=70637.12/min [1710000], rate=70807.45/min [1720000], rate=71172.41/min [1730000], rate=71291.21/min [1740000], rate=71360.22/min [1750000], rate=71477.20/min [1760000], rate=71544.72/min [1770000], rate=71611.60/min [1780000], rate=71677.85/min [1790000], rate=71791.44/min [1800000], rate=71760.80/min [1810000], rate=71635.88/min [1820000], rate=71559.63/min [1830000], rate=71577.57/min [1840000], rate=71456.31/min [1850000], rate=71382.64/min [1860000], rate=71401.15/min [1870000], rate=71374.05/min [1880000], rate=71347.25/min [1890000], rate=71365.64/min [1900000], rate=71339.17/min [1910000], rate=71401.87/min [1920000], rate=71508.38/min [1930000], rate=71569.84/min [1940000], rate=71807.53/min [1950000], rate=71867.32/min [1960000], rate=71970.62/min [1970000], rate=72029.25/min [1980000], rate=72087.38/min -building interval tree based on /tmp/nxf.wPhYkeOZ69/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.07 min). -mapping reads to genes [10000], rate=40000.00/min [20000], rate=40000.00/min [30000], rate=41860.47/min [40000], rate=42105.26/min [50000], rate=43478.26/min [60000], rate=43373.49/min [70000], rate=44680.85/min [80000], rate=45283.02/min [90000], rate=45762.71/min [100000], rate=46511.63/min [110000], rate=47142.86/min [120000], rate=48000.00/min [130000], rate=47852.76/min [140000], rate=48000.00/min [150000], rate=48387.10/min [160000], rate=48730.96/min [170000], rate=49514.56/min [180000], rate=49769.59/min [190000], rate=50000.00/min [200000], rate=50847.46/min [210000], rate=51219.51/min [220000], rate=51968.50/min [230000], rate=52671.76/min [240000], rate=53136.53/min [250000], rate=53763.44/min [260000], rate=54545.45/min [270000], rate=55102.04/min [280000], rate=55629.14/min [290000], rate=56310.68/min [300000], rate=56782.33/min [310000], rate=57407.41/min [320000], rate=58006.04/min [330000], rate=58753.71/min [340000], rate=59475.22/min [350000], rate=60000.00/min [360000], rate=60674.16/min [370000], rate=61157.02/min [380000], rate=61621.62/min [390000], rate=62068.97/min [400000], rate=62827.23/min [410000], rate=62121.21/min [420000], rate=61613.69/min [430000], rate=60992.91/min [440000], rate=60273.97/min [450000], rate=59602.65/min [460000], rate=59100.64/min [470000], rate=58750.00/min [480000], rate=58299.60/min [490000], rate=57988.17/min [500000], rate=57692.31/min [510000], rate=57410.88/min [520000], rate=57247.71/min [530000], rate=57091.56/min [540000], rate=57042.25/min [550000], rate=57093.43/min [560000], rate=56852.79/min [570000], rate=56810.63/min [580000], rate=56585.37/min [590000], rate=56640.00/min [600000], rate=56603.77/min [610000], rate=56744.19/min [620000], rate=56793.89/min [630000], rate=56927.71/min [640000], rate=56888.89/min [650000], rate=56934.31/min [660000], rate=56978.42/min [670000], rate=57102.27/min [680000], rate=57142.86/min [690000], rate=57182.32/min [700000], rate=57298.77/min [710000], rate=57412.40/min [720000], rate=57600.00/min [730000], rate=57859.97/min [740000], rate=58191.35/min [750000], rate=58441.56/min [760000], rate=58687.26/min [770000], rate=58853.50/min [780000], rate=59090.91/min [790000], rate=59398.50/min [800000], rate=59627.33/min [810000], rate=60000.00/min [820000], rate=60294.12/min [830000], rate=60583.94/min [840000], rate=60649.82/min [850000], rate=60714.29/min [860000], rate=60777.39/min [870000], rate=60981.31/min [880000], rate=61111.11/min [890000], rate=61308.84/min [900000], rate=61503.42/min [910000], rate=61764.71/min [920000], rate=61952.86/min [930000], rate=62138.08/min [940000], rate=62251.66/min [950000], rate=62431.54/min [960000], rate=62540.72/min [970000], rate=62715.52/min [980000], rate=62887.70/min [990000], rate=63057.32/min [1000000], rate=63224.45/min [1010000], rate=63455.50/min [1020000], rate=64016.74/min [1030000], rate=64576.80/min [1040000], rate=65135.70/min [1050000], rate=65693.43/min [1060000], rate=66250.00/min [1070000], rate=66597.51/min [1080000], rate=66942.15/min [1090000], rate=67076.92/min [1100000], rate=67415.73/min [1110000], rate=67545.64/min [1120000], rate=67810.29/min [1130000], rate=67935.87/min [1140000], rate=67789.89/min [1150000], rate=67713.44/min [1160000], rate=68035.19/min [1170000], rate=68287.94/min [1180000], rate=68538.24/min [1190000], rate=68653.85/min [1200000], rate=68833.65/min [1210000], rate=69340.97/min [1220000], rate=69847.33/min [1230000], rate=70352.72/min [1240000], rate=70924.69/min [1250000], rate=71428.57/min [1260000], rate=71863.12/min [1270000], rate=72159.09/min [1280000], rate=72248.35/min [1290000], rate=72539.83/min [1300000], rate=72625.70/min [1310000], rate=72912.80/min [1320000], rate=73401.30/min [1330000], rate=73413.06/min [1340000], rate=73424.66/min [1350000], rate=73369.57/min [1360000], rate=73579.80/min [1370000], rate=73788.15/min [1380000], rate=73994.64/min [1390000], rate=74001.77/min [1400000], rate=74204.95/min [1410000], rate=74340.95/min [1420000], rate=74410.48/min [1430000], rate=74608.70/min [1440000], rate=74675.89/min [1450000], rate=74742.27/min [1460000], rate=74807.86/min [1470000], rate=74872.67/min [1480000], rate=75000.00/min [1490000], rate=75126.05/min [1500000], rate=75313.81/min [1510000], rate=75374.38/min [1520000], rate=75309.66/min [1530000], rate=75122.75/min [1540000], rate=75121.95/min [1550000], rate=75181.89/min [1560000], rate=75241.16/min [1570000], rate=75299.76/min [1580000], rate=75357.71/min [1590000], rate=75534.44/min [1600000], rate=75590.55/min [1610000], rate=75705.33/min [1620000], rate=75819.03/min [1630000], rate=75813.95/min [1640000], rate=75925.93/min [1650000], rate=76036.87/min [1660000], rate=76088.62/min [1670000], rate=76197.72/min [1680000], rate=76305.83/min [1690000], rate=76355.42/min [1700000], rate=76404.49/min [1710000], rate=76510.07/min [1720000], rate=76050.11/min [1730000], rate=75381.26/min [1740000], rate=74838.71/min [1750000], rate=74362.61/min [1760000], rate=73897.83/min [1770000], rate=73596.67/min [1780000], rate=73200.82/min [1790000], rate=72813.56/min [1800000], rate=72483.22/min [1810000], rate=72015.92/min [1820000], rate=71372.55/min [1830000], rate=70747.42/min [1840000], rate=70363.29/min [1850000], rate=70031.55/min [1860000], rate=69793.62/min [1870000], rate=69516.73/min [1880000], rate=69117.65/min [1890000], rate=68936.17/min [1900000], rate=68799.03/min [1910000], rate=68705.04/min [1920000], rate=68571.43/min [1930000], rate=68480.19/min [1940000], rate=68269.79/min [1950000], rate=68221.57/min [1960000], rate=68173.91/min [1970000], rate=68166.09/min [1980000], rate=68197.47/min -building interval tree based on /tmp/nxf.wPhYkeOZ69/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.08 min). -mapping reads to genes [10000], rate=75000.00/min [20000], rate=70588.24/min [30000], rate=72000.00/min [40000], rate=77419.35/min [50000], rate=76923.08/min [60000], rate=80000.00/min [70000], rate=79245.28/min [80000], rate=81355.93/min [90000], rate=83076.92/min [100000], rate=86956.52/min [110000], rate=89189.19/min [120000], rate=90000.00/min [130000], rate=90697.67/min [140000], rate=89361.70/min [150000], rate=89108.91/min [160000], rate=88888.89/min [170000], rate=89473.68/min [180000], rate=89256.20/min [190000], rate=89763.78/min [200000], rate=90909.09/min [210000], rate=91304.35/min [220000], rate=91666.67/min [230000], rate=92000.00/min [240000], rate=90000.00/min [250000], rate=88757.40/min [260000], rate=86666.67/min [270000], rate=85263.16/min [280000], rate=84422.11/min [290000], rate=83253.59/min [300000], rate=82949.31/min [310000], rate=82666.67/min [320000], rate=82403.43/min [330000], rate=82157.68/min [340000], rate=82258.06/min [350000], rate=82352.94/min [360000], rate=82758.62/min [370000], rate=83146.07/min [380000], rate=83516.48/min [390000], rate=83870.97/min [400000], rate=84507.04/min [410000], rate=85121.11/min [420000], rate=86006.83/min [430000], rate=85148.51/min [440000], rate=84345.05/min [450000], rate=83850.93/min [460000], rate=83132.53/min [470000], rate=82456.14/min [480000], rate=81818.18/min [490000], rate=81440.44/min [500000], rate=81081.08/min [510000], rate=80738.79/min [520000], rate=80620.16/min [530000], rate=80710.66/min [540000], rate=80798.00/min [550000], rate=81081.08/min [560000], rate=81355.93/min [570000], rate=81818.18/min [580000], rate=82464.45/min [590000], rate=82517.48/min [600000], rate=82758.62/min [610000], rate=82993.20/min [620000], rate=82483.37/min [630000], rate=81641.47/min [640000], rate=80672.27/min [650000], rate=80082.14/min [660000], rate=80324.54/min [670000], rate=80079.68/min [680000], rate=79532.16/min [690000], rate=79007.63/min [700000], rate=78504.67/min [710000], rate=78165.14/min [720000], rate=77978.34/min [730000], rate=77659.57/min [740000], rate=77622.38/min [750000], rate=77452.67/min [760000], rate=77157.36/min [770000], rate=76744.19/min [780000], rate=76595.74/min [790000], rate=76451.61/min [800000], rate=76311.61/min [810000], rate=76175.55/min [820000], rate=76043.28/min [830000], rate=75683.89/min [840000], rate=75562.22/min [850000], rate=75555.56/min [860000], rate=75438.60/min [870000], rate=75324.68/min [880000], rate=75106.69/min [890000], rate=75317.35/min [900000], rate=75104.31/min [910000], rate=74897.12/min [920000], rate=74695.53/min [930000], rate=74499.33/min [940000], rate=74406.33/min [950000], rate=74315.51/min [960000], rate=74226.80/min [970000], rate=74045.80/min [980000], rate=73962.26/min [990000], rate=73880.60/min [1000000], rate=73891.63/min [1010000], rate=73812.42/min [1020000], rate=73646.21/min [1030000], rate=73659.12/min [1040000], rate=73584.91/min [1050000], rate=73684.21/min [1060000], rate=73696.41/min [1070000], rate=73878.02/min [1080000], rate=73972.60/min [1090000], rate=74149.66/min [1100000], rate=74324.32/min [1110000], rate=74496.64/min [1120000], rate=74666.67/min [1130000], rate=74834.44/min [1140000], rate=74754.10/min [1150000], rate=73954.98/min [1160000], rate=73340.36/min [1170000], rate=72595.66/min [1180000], rate=71878.17/min [1190000], rate=71328.67/min [1200000], rate=70381.23/min [1210000], rate=69874.88/min [1220000], rate=69515.67/min [1230000], rate=69295.77/min [1240000], rate=69273.74/min [1250000], rate=69060.77/min [1260000], rate=68852.46/min [1270000], rate=68834.69/min [1280000], rate=68571.43/min [1290000], rate=68495.58/min [1300000], rate=68481.12/min [1310000], rate=68229.17/min [1320000], rate=68041.24/min [1330000], rate=67972.74/min [1340000], rate=67790.89/min [1350000], rate=67556.30/min [1360000], rate=67382.33/min [1370000], rate=67211.77/min [1380000], rate=67098.87/min [1390000], rate=66987.95/min [1400000], rate=66878.98/min [1410000], rate=66666.67/min [1420000], rate=66614.54/min [1430000], rate=66460.11/min [1440000], rate=66359.45/min [1450000], rate=66310.98/min [1460000], rate=66113.21/min [1470000], rate=65968.59/min [1480000], rate=65973.25/min [1490000], rate=66026.59/min [1500000], rate=66030.81/min [1510000], rate=65890.91/min [1520000], rate=65800.87/min [1530000], rate=65806.45/min [1540000], rate=65811.97/min [1550000], rate=65770.86/min [1560000], rate=65730.34/min [1570000], rate=65782.12/min [1580000], rate=65787.65/min [1590000], rate=65838.51/min [1600000], rate=65753.42/min [1610000], rate=65669.61/min [1620000], rate=65675.68/min [1630000], rate=65287.05/min [1640000], rate=64864.86/min [1650000], rate=64790.58/min [1660000], rate=64717.35/min [1670000], rate=64645.16/min [1680000], rate=64698.33/min [1690000], rate=64709.64/min [1700000], rate=64720.81/min [1710000], rate=64772.73/min [1720000], rate=64864.86/min [1730000], rate=64956.20/min [1740000], rate=65006.23/min [1750000], rate=65096.09/min [1760000], rate=65185.19/min [1770000], rate=65273.51/min [1780000], rate=65401.10/min [1790000], rate=65487.80/min [1800000], rate=65613.61/min [1810000], rate=65698.73/min [1820000], rate=65743.53/min [1830000], rate=65827.34/min [1840000], rate=66068.22/min [1850000], rate=66268.66/min [1860000], rate=66310.16/min [1870000], rate=66351.27/min [1880000], rate=66431.10/min [1890000], rate=66510.26/min [1900000], rate=66588.79/min [1910000], rate=66627.91/min [1920000], rate=66244.97/min [1930000], rate=65907.80/min [1940000], rate=65614.43/min [1950000], rate=65363.13/min [1960000], rate=65116.28/min [1970000], rate=64909.39/min -building interval tree based on /tmp/nxf.wPhYkeOZ69/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=75000.00/min [20000], rate=80000.00/min [30000], rate=78260.87/min [40000], rate=92307.69/min [50000], rate=100000.00/min [60000], rate=105882.35/min [70000], rate=105000.00/min [80000], rate=111627.91/min [90000], rate=114893.62/min [100000], rate=117647.06/min [110000], rate=126923.08/min [120000], rate=128571.43/min [130000], rate=123809.52/min [140000], rate=120000.00/min [150000], rate=120000.00/min [160000], rate=123076.92/min [170000], rate=124390.24/min [180000], rate=121348.31/min [190000], rate=123913.04/min [200000], rate=125000.00/min [210000], rate=126000.00/min [220000], rate=130693.07/min [230000], rate=131428.57/min [240000], rate=130909.09/min [250000], rate=128205.13/min [260000], rate=124800.00/min [270000], rate=125581.40/min [280000], rate=126315.79/min [290000], rate=127941.18/min [300000], rate=125874.13/min [310000], rate=125675.68/min [320000], rate=125490.20/min [330000], rate=125316.46/min [340000], rate=125925.93/min [350000], rate=126506.02/min [360000], rate=124137.93/min [370000], rate=122651.93/min [380000], rate=123913.04/min [390000], rate=124468.09/min [400000], rate=124352.33/min [410000], rate=124873.10/min [420000], rate=125373.13/min [430000], rate=125853.66/min [440000], rate=126315.79/min [450000], rate=118942.73/min [460000], rate=111740.89/min [470000], rate=105617.98/min [480000], rate=101052.63/min [490000], rate=97674.42/min [500000], rate=94043.89/min [510000], rate=91071.43/min [520000], rate=88385.27/min [530000], rate=85714.29/min [540000], rate=83290.49/min [550000], rate=81280.79/min [560000], rate=79245.28/min [570000], rate=77904.33/min [580000], rate=76483.52/min [590000], rate=75479.74/min [600000], rate=74380.17/min [610000], rate=72908.37/min [620000], rate=71953.58/min [630000], rate=71052.63/min [640000], rate=70072.99/min [650000], rate=68904.59/min [660000], rate=68158.35/min [670000], rate=67336.68/min [680000], rate=66557.91/min [690000], rate=66028.71/min [700000], rate=65625.00/min [710000], rate=65137.61/min [720000], rate=64767.62/min [730000], rate=64411.76/min [740000], rate=64161.85/min [750000], rate=63920.45/min [760000], rate=63598.33/min [770000], rate=63287.67/min [780000], rate=63072.78/min [790000], rate=62864.72/min [800000], rate=62581.49/min [810000], rate=62467.87/min [820000], rate=62199.75/min [830000], rate=62094.76/min [840000], rate=61992.62/min [850000], rate=61818.18/min [860000], rate=61575.18/min [870000], rate=61629.28/min [880000], rate=61754.39/min [890000], rate=61877.17/min [900000], rate=62068.97/min [910000], rate=61975.03/min [920000], rate=61883.41/min [930000], rate=61794.02/min [940000], rate=61706.78/min [950000], rate=61621.62/min [960000], rate=61538.46/min [970000], rate=61522.20/min [980000], rate=61506.28/min [990000], rate=61554.40/min [1000000], rate=61601.64/min [1010000], rate=61648.02/min [1020000], rate=61384.15/min [1030000], rate=61431.41/min [1040000], rate=61477.83/min [1050000], rate=61643.84/min [1060000], rate=61807.58/min [1070000], rate=61909.35/min [1080000], rate=62068.97/min [1090000], rate=62167.30/min [1100000], rate=62381.85/min [1110000], rate=62535.21/min [1120000], rate=62686.57/min [1130000], rate=62835.96/min [1140000], rate=62637.36/min [1150000], rate=62500.00/min [1160000], rate=62421.52/min [1170000], rate=62344.58/min [1180000], rate=62269.13/min [1190000], rate=62249.35/min [1200000], rate=62283.74/min [1210000], rate=62317.60/min [1220000], rate=62244.90/min [1230000], rate=62225.97/min [1240000], rate=62259.41/min [1250000], rate=62292.36/min [1260000], rate=62376.24/min [1270000], rate=62459.02/min [1280000], rate=62591.69/min [1290000], rate=62672.06/min [1300000], rate=62751.41/min [1310000], rate=62930.34/min [1320000], rate=63057.32/min [1330000], rate=63182.90/min [1340000], rate=63307.09/min [1350000], rate=63479.62/min [1360000], rate=63600.94/min [1370000], rate=63720.93/min [1380000], rate=63938.22/min [1390000], rate=63810.25/min [1400000], rate=63300.68/min [1410000], rate=62713.12/min [1420000], rate=62280.70/min [1430000], rate=61949.46/min [1440000], rate=61626.25/min [1450000], rate=61354.02/min [1460000], rate=61173.18/min [1470000], rate=60953.70/min [1480000], rate=60697.20/min [1490000], rate=60528.10/min [1500000], rate=60362.17/min [1510000], rate=60239.36/min [1520000], rate=60118.66/min [1530000], rate=60117.88/min [1540000], rate=60117.11/min [1550000], rate=60038.73/min [1560000], rate=59961.56/min [1570000], rate=59885.57/min [1580000], rate=59848.48/min [1590000], rate=59811.91/min [1600000], rate=59775.84/min [1610000], rate=59740.26/min [1620000], rate=59778.60/min [1630000], rate=59779.95/min [1640000], rate=59781.29/min [1650000], rate=59818.73/min [1660000], rate=59819.82/min [1670000], rate=59892.41/min [1680000], rate=59964.31/min [1690000], rate=60071.09/min [1700000], rate=60176.99/min [1710000], rate=60246.62/min [1720000], rate=60386.19/min [1730000], rate=60489.51/min [1740000], rate=60381.72/min [1750000], rate=60103.03/min [1760000], rate=59627.33/min [1770000], rate=59131.40/min [1780000], rate=58972.94/min [1790000], rate=58817.09/min [1800000], rate=58663.77/min [1810000], rate=58576.05/min [1820000], rate=58458.24/min [1830000], rate=58404.26/min [1840000], rate=58350.95/min [1850000], rate=58298.32/min [1860000], rate=58246.35/min [1870000], rate=58225.22/min [1880000], rate=58264.46/min [1890000], rate=58213.55/min [1900000], rate=58222.68/min [1910000], rate=58202.13/min [1920000], rate=58152.45/min [1930000], rate=58074.22/min [1940000], rate=58025.92/min [1950000], rate=58006.94/min [1960000], rate=57988.17/min [1970000], rate=57998.04/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.wPhYkeOZ69/ctat_genome_lib_build_dir --filt_file /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 12000000.00 reads per min processed... 9000000.00 reads per min processed... 8000000.00 reads per min processed... 6000000.00 reads per min processed... 5142857.14 reads per min processed... 4666666.67 reads per min processed... 4363636.36 reads per min processed... 4500000.00 reads per min processed... 4000000.00 reads per min processed... 4125000.00 reads per min processed... 4000000.00 reads per min processed... 3900000.00 reads per min processed... 3818181.82 reads per min processed... 3750000.00 reads per min processed... 3692307.69 reads per min processed... 3777777.78 reads per min processed... 3724137.93 reads per min processed... 3562500.00 reads per min processed... 3636363.64 reads per min processed... 3600000.00 reads per min processed... 3567567.57 reads per min processed... 3538461.54 reads per min processed... 3512195.12 reads per min processed... 3488372.09 reads per min processed... 3466666.67 reads per min processed... 3521739.13 reads per min processed... 3500000.00 reads per min processed... 3480000.00 reads per min processed... 3461538.46 reads per min processed... 3509433.96 reads per min processed... 3490909.09 reads per min processed... 3473684.21 reads per min processed... 3517241.38 reads per min processed... 3500000.00 reads per min processed... 3540983.61 reads per min processed... 3523809.52 reads per min processed... 3562500.00 reads per min processed... 3656250.00 reads per min processed... 3692307.69 reads per min processed... 3784615.38 reads per min processed... 3761194.03 reads per min processed... 3739130.43 reads per min processed... 3771428.57 reads per min processed... 3750000.00 reads per min processed... 3780821.92 reads per min processed... 3760000.00 reads per min processed... 3789473.68 reads per min processed... 3769230.77 reads per min processed... 3750000.00 reads per min processed... 3777777.78 reads per min processed... 3759036.14 reads per min processed... 3741176.47 reads per min processed... 3767441.86 reads per min processed... 3750000.00 reads per min processed... 3733333.33 reads per min processed... 3758241.76 reads per min processed... 3741935.48 reads per min processed... 3726315.79 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.wPhYkeOZ69/1173_CH0_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.wPhYkeOZ69/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -582965.269938 EM: Round [1] log likelihood: -582671.910786 EM: Round [2] log likelihood: -582563.728800 EM: Round [3] log likelihood: -582512.776094 EM: Round [4] log likelihood: -582485.894854 EM: Round [5] log likelihood: -582470.663558 EM: Round [6] log likelihood: -582461.516017 EM: Round [7] log likelihood: -582455.727243 EM: Round [8] log likelihood: -582451.885811 EM: Round [9] log likelihood: -582449.226530 EM: Round [10] log likelihood: -582447.316757 EM: Round [11] log likelihood: -582445.901721 EM: Round [12] log likelihood: -582444.825300 EM: Round [13] log likelihood: -582443.988086 EM: Round [14] log likelihood: -582443.324473 EM: Round [15] log likelihood: -582442.789754 EM: Round [16] log likelihood: -582442.352597 EM: Round [17] log likelihood: -582441.990513 EM: Round [18] log likelihood: -582441.687032 EM: Round [19] log likelihood: -582441.429880 EM: Round [20] log likelihood: -582441.209777 EM: Round [21] log likelihood: -582441.019613 EM: Round [22] log likelihood: -582440.853879 EM: Round [23] log likelihood: -582440.708262 EM: Round [24] log likelihood: -582440.579355 EM: Round [25] log likelihood: -582440.464439 EM: Round [26] log likelihood: -582440.361333 EM: Round [27] log likelihood: -582440.268268 EM: Round [28] log likelihood: -582440.183803 EM: Round [29] log likelihood: -582440.106753 EM: Round [30] log likelihood: -582440.036140 EM: Round [31] log likelihood: -582439.971149 EM: Round [32] log likelihood: -582439.911100 EM: Round [33] log likelihood: -582439.855417 EM: Round [34] log likelihood: -582439.803615 EM: Round [35] log likelihood: -582439.755281 EM: Round [36] log likelihood: -582439.710060 EM: Round [37] log likelihood: -582439.667646 EM: Round [38] log likelihood: -582439.627775 EM: Round [39] log likelihood: -582439.590219 EM: Round [40] log likelihood: -582439.554774 EM: Round [41] log likelihood: -582439.521266 EM: Round [42] log likelihood: -582439.489539 EM: Round [43] log likelihood: -582439.459453 EM: Round [44] log likelihood: -582439.430887 EM: Round [45] log likelihood: -582439.403730 EM: Round [46] log likelihood: -582439.377883 EM: Round [47] log likelihood: -582439.353257 EM: Round [48] log likelihood: -582439.329772 EM: Round [49] log likelihood: -582439.307354 EM: Round [50] log likelihood: -582439.285937 EM: Round [51] log likelihood: -582439.265459 EM: Round [52] log likelihood: -582439.245866 EM: Round [53] log likelihood: -582439.227105 EM: Round [54] log likelihood: -582439.209130 EM: Round [55] log likelihood: -582439.191897 EM: Round [56] log likelihood: -582439.175365 EM: Round [57] log likelihood: -582439.159497 EM: Round [58] log likelihood: -582439.144258 EM: Round [59] log likelihood: -582439.129616 EM: Round [60] log likelihood: -582439.115541 EM: Round [61] log likelihood: -582439.102004 EM: Round [62] log likelihood: -582439.088978 EM: Round [63] log likelihood: -582439.076440 EM: Round [64] log likelihood: -582439.064365 EM: Round [65] log likelihood: -582439.052733 EM: Round [66] log likelihood: -582439.041521 EM: Round [67] log likelihood: -582439.030712 EM: Round [68] log likelihood: -582439.020287 EM: Round [69] log likelihood: -582439.010228 EM: Round [70] log likelihood: -582439.000520 EM: Round [71] log likelihood: -582438.991147 EM: Round [72] log likelihood: -582438.982095 EM: Round [73] log likelihood: -582438.973349 EM: Round [74] log likelihood: -582438.964898 EM: Round [75] log likelihood: -582438.956728 EM: Round [76] log likelihood: -582438.948828 EM: Round [77] log likelihood: -582438.941187 EM: Round [78] log likelihood: -582438.933795 EM: Round [79] log likelihood: -582438.926640 EM: Round [80] log likelihood: -582438.919715 EM: Round [81] log likelihood: -582438.913009 EM: Round [82] log likelihood: -582438.906515 EM: Round [83] log likelihood: -582438.900223 EM: Round [84] log likelihood: -582438.894127 EM: Round [85] log likelihood: -582438.888219 EM: Round [86] log likelihood: -582438.882491 EM: Round [87] log likelihood: -582438.876938 EM: Round [88] log likelihood: -582438.871552 EM: Round [89] log likelihood: -582438.866327 EM: Round [90] log likelihood: -582438.861258 EM: Round [91] log likelihood: -582438.856338 EM: Round [92] log likelihood: -582438.851564 EM: Round [93] log likelihood: -582438.846928 EM: Round [94] log likelihood: -582438.842427 EM: Round [95] log likelihood: -582438.838056 EM: Round [96] log likelihood: -582438.833810 EM: Round [97] log likelihood: -582438.829685 EM: Round [98] log likelihood: -582438.825677 EM: Round [99] log likelihood: -582438.821782 EM: Round [100] log likelihood: -582438.817996 EM: Round [101] log likelihood: -582438.814315 EM: Round [102] log likelihood: -582438.810736 EM: Round [103] log likelihood: -582438.807256 EM: Round [104] log likelihood: -582438.803871 EM: Round [105] log likelihood: -582438.800579 EM: Round [106] log likelihood: -582438.797376 EM: Round [107] log likelihood: -582438.794259 EM: Round [108] log likelihood: -582438.791227 EM: Round [109] log likelihood: -582438.788275 EM: Round [110] log likelihood: -582438.785402 EM: Round [111] log likelihood: -582438.782605 EM: Round [112] log likelihood: -582438.779882 EM: Round [113] log likelihood: -582438.777230 EM: Round [114] log likelihood: -582438.774648 EM: Round [115] log likelihood: -582438.772133 EM: Round [116] log likelihood: -582438.769684 EM: Round [117] log likelihood: -582438.767298 EM: Round [118] log likelihood: -582438.764973 EM: Round [119] log likelihood: -582438.762707 EM: Round [120] log likelihood: -582438.760500 EM: Round [121] log likelihood: -582438.758349 EM: Round [122] log likelihood: -582438.756252 EM: Round [123] log likelihood: -582438.754209 EM: Round [124] log likelihood: -582438.752217 EM: Round [125] log likelihood: -582438.750274 EM: Round [126] log likelihood: -582438.748381 EM: Round [127] log likelihood: -582438.746534 EM: Round [128] log likelihood: -582438.744734 EM: Round [129] log likelihood: -582438.742978 EM: Round [130] log likelihood: -582438.741266 EM: Round [131] log likelihood: -582438.739595 EM: Round [132] log likelihood: -582438.737966 EM: Round [133] log likelihood: -582438.736377 EM: Round [134] log likelihood: -582438.734826 EM: Round [135] log likelihood: -582438.733314 EM: Round [136] log likelihood: -582438.731838 EM: Round [137] log likelihood: -582438.730397 EM: Round [138] log likelihood: -582438.728992 EM: Round [139] log likelihood: -582438.727620 EM: Round [140] log likelihood: -582438.726282 EM: Round [141] log likelihood: -582438.724975 EM: Round [142] log likelihood: -582438.723700 EM: Round [143] log likelihood: -582438.722455 EM: Round [144] log likelihood: -582438.721240 EM: Round [145] log likelihood: -582438.720053 EM: Round [146] log likelihood: -582438.718895 EM: Round [147] log likelihood: -582438.717764 EM: Round [148] log likelihood: -582438.716660 EM: Round [149] log likelihood: -582438.715582 EM: Round [150] log likelihood: -582438.714530 EM: Round [151] log likelihood: -582438.713502 EM: Round [152] log likelihood: -582438.712498 EM: Round [153] log likelihood: -582438.711517 EM: Round [154] log likelihood: -582438.710560 EM: Round [155] log likelihood: -582438.709624 EM: Round [156] log likelihood: -582438.708711 EM: Round [157] log likelihood: -582438.707818 EM: Round [158] log likelihood: -582438.706947 EM: Round [159] log likelihood: -582438.706095 EM: Round [160] log likelihood: -582438.705263 EM: Round [161] log likelihood: -582438.704451 EM: Round [162] log likelihood: -582438.703657 EM: Round [163] log likelihood: -582438.702881 EM: Round [164] log likelihood: -582438.702123 EM: Round [165] log likelihood: -582438.701382 EM: Round [166] log likelihood: -582438.700659 EM: Round [167] log likelihood: -582438.699951 EM: Round [168] log likelihood: -582438.699260 EM: Round [169] log likelihood: -582438.698585 EM: Round [170] log likelihood: -582438.697925 EM: Round [171] log likelihood: -582438.697280 EM: Round [172] log likelihood: -582438.696650 EM: Round [173] log likelihood: -582438.696034 EM: Round [174] log likelihood: -582438.695432 EM: Round [175] log likelihood: -582438.694843 EM: Round [176] log likelihood: -582438.694268 EM: Round [177] log likelihood: -582438.693706 EM: Round [178] log likelihood: -582438.693156 EM: Round [179] log likelihood: -582438.692619 EM: Round [180] log likelihood: -582438.692094 EM: Round [181] log likelihood: -582438.691580 EM: Round [182] log likelihood: -582438.691078 EM: Round [183] log likelihood: -582438.690588 EM: Round [184] log likelihood: -582438.690108 EM: Round [185] log likelihood: -582438.689639 EM: Round [186] log likelihood: -582438.689180 EM: Round [187] log likelihood: -582438.688732 EM: Round [188] log likelihood: -582438.688293 EM: Round [189] log likelihood: -582438.687864 EM: Round [190] log likelihood: -582438.687445 EM: Round [191] log likelihood: -582438.687035 EM: Round [192] log likelihood: -582438.686634 EM: Round [193] log likelihood: -582438.686242 EM: Round [194] log likelihood: -582438.685859 EM: Round [195] log likelihood: -582438.685484 EM: Round [196] log likelihood: -582438.685118 EM: Round [197] log likelihood: -582438.684759 EM: Round [198] log likelihood: -582438.684408 EM: Round [199] log likelihood: -582438.684066 EM: Round [200] log likelihood: -582438.683730 EM: Round [201] log likelihood: -582438.683402 EM: Round [202] log likelihood: -582438.683081 EM: Round [203] log likelihood: -582438.682767 EM: Round [204] log likelihood: -582438.682460 EM: Round [205] log likelihood: -582438.682160 EM: Round [206] log likelihood: -582438.681866 EM: Round [207] log likelihood: -582438.681579 EM: Round [208] log likelihood: -582438.681298 EM: Round [209] log likelihood: -582438.681023 EM: Round [210] log likelihood: -582438.680754 EM: Round [211] log likelihood: -582438.680491 EM: Round [212] log likelihood: -582438.680233 EM: Round [213] log likelihood: -582438.679982 EM: Round [214] log likelihood: -582438.679735 EM: Round [215] log likelihood: -582438.679494 EM: Round [216] log likelihood: -582438.679258 EM: Round [217] log likelihood: -582438.679028 EM: Round [218] log likelihood: -582438.678802 EM: Round [219] log likelihood: -582438.678581 EM: Round [220] log likelihood: -582438.678365 EM: Round [221] log likelihood: -582438.678153 EM: Round [222] log likelihood: -582438.677946 EM: Round [223] log likelihood: -582438.677744 EM: Round [224] log likelihood: -582438.677546 EM: Round [225] log likelihood: -582438.677352 EM: Round [226] log likelihood: -582438.677162 EM: Round [227] log likelihood: -582438.676976 EM: Round [228] log likelihood: -582438.676794 EM: Round [229] log likelihood: -582438.676617 EM: Round [230] log likelihood: -582438.676442 EM: Round [231] log likelihood: -582438.676272 EM: Round [232] log likelihood: -582438.676105 EM: Round [233] log likelihood: -582438.675942 EM: Round [234] log likelihood: -582438.675783 EM: Round [235] log likelihood: -582438.675626 EM: Round [236] log likelihood: -582438.675473 EM: Round [237] log likelihood: -582438.675324 EM: Round [238] log likelihood: -582438.675177 EM: Round [239] log likelihood: -582438.675033 EM: Round [240] log likelihood: -582438.674893 EM: Round [241] log likelihood: -582438.674756 EM: Round [242] log likelihood: -582438.674621 EM: Round [243] log likelihood: -582438.674489 EM: Round [244] log likelihood: -582438.674360 EM: Round [245] log likelihood: -582438.674234 EM: Round [246] log likelihood: -582438.674110 EM: Round [247] log likelihood: -582438.673990 EM: Round [248] log likelihood: -582438.673871 EM: Round [249] log likelihood: -582438.673755 EM: Round [250] log likelihood: -582438.673642 EM: Round [251] log likelihood: -582438.673530 EM: Round [252] log likelihood: -582438.673422 EM: Round [253] log likelihood: -582438.673315 EM: Round [254] log likelihood: -582438.673211 EM: Round [255] log likelihood: -582438.673109 EM: Round [256] log likelihood: -582438.673008 EM: Round [257] log likelihood: -582438.672911 EM: Stopping iterations at round 257 due to insufficient improvement in likelihood. EM: Starting log likelihood: -582437.786827 EM: Round [1] log likelihood: -582190.021353 EM: Round [2] log likelihood: -582098.436811 EM: Round [3] log likelihood: -582055.594141 EM: Round [4] log likelihood: -582033.161071 EM: Round [5] log likelihood: -582020.513616 EM: Round [6] log likelihood: -582012.935186 EM: Round [7] log likelihood: -582008.139566 EM: Round [8] log likelihood: -582004.952179 EM: Round [9] log likelihood: -582002.739823 EM: Round [10] log likelihood: -582001.145742 EM: Round [11] log likelihood: -581999.960271 EM: Round [12] log likelihood: -581999.055037 EM: Round [13] log likelihood: -581998.348289 EM: Round [14] log likelihood: -581997.786024 EM: Round [15] log likelihood: -581997.331385 EM: Round [16] log likelihood: -581996.958490 EM: Round [17] log likelihood: -581996.648730 EM: Round [18] log likelihood: -581996.388443 EM: Round [19] log likelihood: -581996.167434 EM: Round [20] log likelihood: -581995.977978 EM: Round [21] log likelihood: -581995.814146 EM: Round [22] log likelihood: -581995.671335 EM: Round [23] log likelihood: -581995.545936 EM: Round [24] log likelihood: -581995.435087 EM: Round [25] log likelihood: -581995.336502 EM: Round [26] log likelihood: -581995.248336 EM: Round [27] log likelihood: -581995.169090 EM: Round [28] log likelihood: -581995.097536 EM: Round [29] log likelihood: -581995.032658 EM: Round [30] log likelihood: -581994.973611 EM: Round [31] log likelihood: -581994.919688 EM: Round [32] log likelihood: -581994.870293 EM: Round [33] log likelihood: -581994.824919 EM: Round [34] log likelihood: -581994.783131 EM: Round [35] log likelihood: -581994.744559 EM: Round [36] log likelihood: -581994.708881 EM: Round [37] log likelihood: -581994.675815 EM: Round [38] log likelihood: -581994.645119 EM: Round [39] log likelihood: -581994.616576 EM: Round [40] log likelihood: -581994.589998 EM: Round [41] log likelihood: -581994.565217 EM: Round [42] log likelihood: -581994.542082 EM: Round [43] log likelihood: -581994.520460 EM: Round [44] log likelihood: -581994.500231 EM: Round [45] log likelihood: -581994.481287 EM: Round [46] log likelihood: -581994.463531 EM: Round [47] log likelihood: -581994.446874 EM: Round [48] log likelihood: -581994.431237 EM: Round [49] log likelihood: -581994.416545 EM: Round [50] log likelihood: -581994.402733 EM: Round [51] log likelihood: -581994.389739 EM: Round [52] log likelihood: -581994.377507 EM: Round [53] log likelihood: -581994.365986 EM: Round [54] log likelihood: -581994.355129 EM: Round [55] log likelihood: -581994.344892 EM: Round [56] log likelihood: -581994.335234 EM: Round [57] log likelihood: -581994.326119 EM: Round [58] log likelihood: -581994.317511 EM: Round [59] log likelihood: -581994.309379 EM: Round [60] log likelihood: -581994.301694 EM: Round [61] log likelihood: -581994.294426 EM: Round [62] log likelihood: -581994.287552 EM: Round [63] log likelihood: -581994.281047 EM: Round [64] log likelihood: -581994.274888 EM: Round [65] log likelihood: -581994.269055 EM: Round [66] log likelihood: -581994.263528 EM: Round [67] log likelihood: -581994.258290 EM: Round [68] log likelihood: -581994.253324 EM: Round [69] log likelihood: -581994.248613 EM: Round [70] log likelihood: -581994.244142 EM: Round [71] log likelihood: -581994.239899 EM: Round [72] log likelihood: -581994.235870 EM: Round [73] log likelihood: -581994.232042 EM: Round [74] log likelihood: -581994.228404 EM: Round [75] log likelihood: -581994.224947 EM: Round [76] log likelihood: -581994.221658 EM: Round [77] log likelihood: -581994.218530 EM: Round [78] log likelihood: -581994.215553 EM: Round [79] log likelihood: -581994.212719 EM: Round [80] log likelihood: -581994.210021 EM: Round [81] log likelihood: -581994.207449 EM: Round [82] log likelihood: -581994.204999 EM: Round [83] log likelihood: -581994.202663 EM: Round [84] log likelihood: -581994.200435 EM: Round [85] log likelihood: -581994.198309 EM: Round [86] log likelihood: -581994.196280 EM: Round [87] log likelihood: -581994.194343 EM: Round [88] log likelihood: -581994.192493 EM: Round [89] log likelihood: -581994.190726 EM: Round [90] log likelihood: -581994.189036 EM: Round [91] log likelihood: -581994.187421 EM: Round [92] log likelihood: -581994.185875 EM: Round [93] log likelihood: -581994.184397 EM: Round [94] log likelihood: -581994.182981 EM: Round [95] log likelihood: -581994.181626 EM: Round [96] log likelihood: -581994.180327 EM: Round [97] log likelihood: -581994.179083 EM: Round [98] log likelihood: -581994.177890 EM: Round [99] log likelihood: -581994.176746 EM: Round [100] log likelihood: -581994.175648 EM: Round [101] log likelihood: -581994.174595 EM: Round [102] log likelihood: -581994.173584 EM: Round [103] log likelihood: -581994.172612 EM: Round [104] log likelihood: -581994.171679 EM: Round [105] log likelihood: -581994.170781 EM: Round [106] log likelihood: -581994.169918 EM: Round [107] log likelihood: -581994.169088 EM: Round [108] log likelihood: -581994.168290 EM: Round [109] log likelihood: -581994.167521 EM: Round [110] log likelihood: -581994.166780 EM: Round [111] log likelihood: -581994.166066 EM: Round [112] log likelihood: -581994.165379 EM: Round [113] log likelihood: -581994.164716 EM: Round [114] log likelihood: -581994.164076 EM: Round [115] log likelihood: -581994.163459 EM: Round [116] log likelihood: -581994.162864 EM: Round [117] log likelihood: -581994.162289 EM: Round [118] log likelihood: -581994.161733 EM: Round [119] log likelihood: -581994.161197 EM: Round [120] log likelihood: -581994.160678 EM: Round [121] log likelihood: -581994.160176 EM: Round [122] log likelihood: -581994.159691 EM: Round [123] log likelihood: -581994.159221 EM: Round [124] log likelihood: -581994.158767 EM: Round [125] log likelihood: -581994.158327 EM: Round [126] log likelihood: -581994.157900 EM: Round [127] log likelihood: -581994.157487 EM: Round [128] log likelihood: -581994.157086 EM: Round [129] log likelihood: -581994.156698 EM: Round [130] log likelihood: -581994.156321 EM: Round [131] log likelihood: -581994.155956 EM: Round [132] log likelihood: -581994.155601 EM: Round [133] log likelihood: -581994.155256 EM: Round [134] log likelihood: -581994.154922 EM: Round [135] log likelihood: -581994.154597 EM: Round [136] log likelihood: -581994.154281 EM: Round [137] log likelihood: -581994.153974 EM: Round [138] log likelihood: -581994.153675 EM: Round [139] log likelihood: -581994.153385 EM: Round [140] log likelihood: -581994.153102 EM: Round [141] log likelihood: -581994.152827 EM: Round [142] log likelihood: -581994.152559 EM: Round [143] log likelihood: -581994.152299 EM: Round [144] log likelihood: -581994.152045 EM: Round [145] log likelihood: -581994.151797 EM: Round [146] log likelihood: -581994.151556 EM: Round [147] log likelihood: -581994.151321 EM: Round [148] log likelihood: -581994.151091 EM: Round [149] log likelihood: -581994.150868 EM: Round [150] log likelihood: -581994.150650 EM: Round [151] log likelihood: -581994.150437 EM: Round [152] log likelihood: -581994.150229 EM: Round [153] log likelihood: -581994.150026 EM: Round [154] log likelihood: -581994.149828 EM: Round [155] log likelihood: -581994.149635 EM: Round [156] log likelihood: -581994.149446 EM: Round [157] log likelihood: -581994.149261 EM: Round [158] log likelihood: -581994.149081 EM: Round [159] log likelihood: -581994.148905 EM: Round [160] log likelihood: -581994.148732 EM: Round [161] log likelihood: -581994.148564 EM: Round [162] log likelihood: -581994.148399 EM: Round [163] log likelihood: -581994.148238 EM: Round [164] log likelihood: -581994.148080 EM: Round [165] log likelihood: -581994.147925 EM: Round [166] log likelihood: -581994.147774 EM: Round [167] log likelihood: -581994.147626 EM: Round [168] log likelihood: -581994.147481 EM: Round [169] log likelihood: -581994.147340 EM: Round [170] log likelihood: -581994.147201 EM: Round [171] log likelihood: -581994.147065 EM: Round [172] log likelihood: -581994.146931 EM: Round [173] log likelihood: -581994.146801 EM: Round [174] log likelihood: -581994.146673 EM: Round [175] log likelihood: -581994.146547 EM: Round [176] log likelihood: -581994.146424 EM: Round [177] log likelihood: -581994.146304 EM: Round [178] log likelihood: -581994.146186 EM: Round [179] log likelihood: -581994.146070 EM: Round [180] log likelihood: -581994.145956 EM: Round [181] log likelihood: -581994.145845 EM: Round [182] log likelihood: -581994.145736 EM: Round [183] log likelihood: -581994.145628 EM: Round [184] log likelihood: -581994.145523 EM: Round [185] log likelihood: -581994.145420 EM: Round [186] log likelihood: -581994.145319 EM: Round [187] log likelihood: -581994.145219 EM: Stopping iterations at round 187 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.wPhYkeOZ69/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.wPhYkeOZ69/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.wPhYkeOZ69/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 172844936 > /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.wPhYkeOZ69/ctat_genome_lib_build_dir > /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.wPhYkeOZ69/ctat_genome_lib_build_dir --annotate /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.wPhYkeOZ69/ctat_genome_lib_build_dir -done, see /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.wPhYkeOZ69/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 1636, filtered: 10106) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.wPhYkeOZ69/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.wPhYkeOZ69/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000228327.3] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000245958.6] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000203413.3] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000230239.1] WARNING, no entry stored in dbm for [ENSG00000186704.9] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000272693.4] WARNING, no entry stored in dbm for [ENSG00000225594.1] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000237529.2] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000272848.2] WARNING, no entry stored in dbm for [ENSG00000242435.1] WARNING, no entry stored in dbm for [ENSG00000067601.8] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000272150.5] WARNING, no entry stored in dbm for [ENSG00000258853.1] WARNING, no entry stored in dbm for [ENSG00000230912.1] WARNING, no entry stored in dbm for [ENSG00000203413.3] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000251314.2] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000250802.7] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000226823.1] WARNING, no entry stored in dbm for [ENSG00000232295.7] WARNING, no entry stored in dbm for [ENSG00000269904.2] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000229419.1] WARNING, no entry stored in dbm for [ENSG00000235777.1] WARNING, no entry stored in dbm for [ENSG00000283541.1] WARNING, no entry stored in dbm for [ENSG00000249419.1] WARNING, no entry stored in dbm for [ENSG00000288549.1] WARNING, no entry stored in dbm for [ENSG00000267519.6] WARNING, no entry stored in dbm for [ENSG00000270277.1] WARNING, no entry stored in dbm for [ENSG00000248323.7] WARNING, no entry stored in dbm for [ENSG00000228221.6] WARNING, no entry stored in dbm for [ENSG00000214433.4] WARNING, no entry stored in dbm for [ENSG00000231528.3] WARNING, no entry stored in dbm for [ENSG00000254275.6] WARNING, no entry stored in dbm for [ENSG00000283541.1] WARNING, no entry stored in dbm for [ENSG00000168405.17] WARNING, no entry stored in dbm for [ENSG00000226445.2] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000243289.1] WARNING, no entry stored in dbm for [ENSG00000257252.6] WARNING, no entry stored in dbm for [ENSG00000285799.1] WARNING, no entry stored in dbm for [ENSG00000254741.1] WARNING, no entry stored in dbm for [ENSG00000235749.3] WARNING, no entry stored in dbm for [ENSG00000227486.2] WARNING, no entry stored in dbm for [ENSG00000226310.1] WARNING, no entry stored in dbm for [ENSG00000246596.7] WARNING, no entry stored in dbm for [ENSG00000283696.1] WARNING, no entry stored in dbm for [ENSG00000287126.1] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000286436.1] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000254951.7] WARNING, no entry stored in dbm for [ENSG00000269032.1] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000267727.1] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000250778.1] WARNING, no entry stored in dbm for [ENSG00000214243.3] WARNING, no entry stored in dbm for [ENSG00000225264.3] WARNING, no entry stored in dbm for [ENSG00000242779.7] WARNING, no entry stored in dbm for [ENSG00000267106.8] WARNING, no entry stored in dbm for [ENSG00000242779.7] WARNING, no entry stored in dbm for [ENSG00000261403.1] WARNING, no entry stored in dbm for [ENSG00000274775.2] WARNING, no entry stored in dbm for [ENSG00000279115.2] WARNING, no entry stored in dbm for [ENSG00000239969.5] WARNING, no entry stored in dbm for [ENSG00000274235.1] WARNING, no entry stored in dbm for [ENSG00000232560.7] WARNING, no entry stored in dbm for [ENSG00000288584.1] WARNING, no entry stored in dbm for [ENSG00000182841.12] WARNING, no entry stored in dbm for [ENSG00000232096.1] WARNING, no entry stored in dbm for [ENSG00000272848.2] WARNING, no entry stored in dbm for [ENSG00000229526.2] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000237529.2] WARNING, no entry stored in dbm for [ENSG00000271111.1] WARNING, no entry stored in dbm for [ENSG00000250859.1] WARNING, no entry stored in dbm for [ENSG00000276550.4] WARNING, no entry stored in dbm for [ENSG00000236021.2] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000287089.1] WARNING, no entry stored in dbm for [ENSG00000225573.4] WARNING, no entry stored in dbm for [ENSG00000216853.1] WARNING, no entry stored in dbm for [ENSG00000235237.1] WARNING, no entry stored in dbm for [ENSG00000204778.4] WARNING, no entry stored in dbm for [ENSG00000244627.5] WARNING, no entry stored in dbm for [ENSG00000254519.5] WARNING, no entry stored in dbm for [ENSG00000232894.1] WARNING, no entry stored in dbm for [ENSG00000180438.15] WARNING, no entry stored in dbm for [ENSG00000259498.1] WARNING, no entry stored in dbm for [ENSG00000267325.2] WARNING, no entry stored in dbm for [ENSG00000232719.1] WARNING, no entry stored in dbm for [ENSG00000185332.8] WARNING, no entry stored in dbm for [ENSG00000284977.2] WARNING, no entry stored in dbm for [ENSG00000267452.3] WARNING, no entry stored in dbm for [ENSG00000281896.1] WARNING, no entry stored in dbm for [ENSG00000234911.2] WARNING, no entry stored in dbm for [ENSG00000268858.2] WARNING, no entry stored in dbm for [ENSG00000260922.2] WARNING, no entry stored in dbm for [ENSG00000261693.1] WARNING, no entry stored in dbm for [ENSG00000247708.8] WARNING, no entry stored in dbm for [ENSG00000205181.7] WARNING, no entry stored in dbm for [ENSG00000237737.6] WARNING, no entry stored in dbm for [ENSG00000267543.1] WARNING, no entry stored in dbm for [ENSG00000233225.3] WARNING, no entry stored in dbm for [ENSG00000258647.6] WARNING, no entry stored in dbm for [ENSG00000258704.6] WARNING, no entry stored in dbm for [ENSG00000233399.2] WARNING, no entry stored in dbm for [ENSG00000247556.6] WARNING, no entry stored in dbm for [ENSG00000242207.1] WARNING, no entry stored in dbm for [ENSG00000224699.9] WARNING, no entry stored in dbm for [ENSG00000287951.1] WARNING, no entry stored in dbm for [ENSG00000209645.1] WARNING, no entry stored in dbm for [ENSG00000207008.1] WARNING, no entry stored in dbm for [ENSG00000207008.1] WARNING, no entry stored in dbm for [ENSG00000245910.8] WARNING, no entry stored in dbm for [ENSG00000235531.11] WARNING, no entry stored in dbm for [ENSG00000260630.7] WARNING, no entry stored in dbm for [ENSG00000248445.5] WARNING, no entry stored in dbm for [ENSG00000215162.2] WARNING, no entry stored in dbm for [ENSG00000257746.2] WARNING, no entry stored in dbm for [ENSG00000247925.2] WARNING, no entry stored in dbm for [ENSG00000287920.1] WARNING, no entry stored in dbm for [ENSG00000261556.10] WARNING, no entry stored in dbm for [ENSG00000237037.9] WARNING, no entry stored in dbm for [ENSG00000237037.9] WARNING, no entry stored in dbm for [ENSG00000232295.7] WARNING, no entry stored in dbm for [ENSG00000260727.2] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000260727.2] WARNING, no entry stored in dbm for [ENSG00000285051.2] WARNING, no entry stored in dbm for [ENSG00000286856.1] WARNING, no entry stored in dbm for [ENSG00000214626.2] WARNING, no entry stored in dbm for [ENSG00000261490.1] WARNING, no entry stored in dbm for [ENSG00000185031.6] WARNING, no entry stored in dbm for [ENSG00000257225.1] WARNING, no entry stored in dbm for [ENSG00000262049.1] WARNING, no entry stored in dbm for [ENSG00000232044.7] WARNING, no entry stored in dbm for [ENSG00000262801.6] WARNING, no entry stored in dbm for [ENSG00000258412.1] WARNING, no entry stored in dbm for [ENSG00000226777.7] WARNING, no entry stored in dbm for [ENSG00000267414.1] WARNING, no entry stored in dbm for [ENSG00000280414.1] WARNING, no entry stored in dbm for [ENSG00000267337.2] WARNING, no entry stored in dbm for [ENSG00000249839.1] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000185986.12] WARNING, no entry stored in dbm for [ENSG00000188002.10] WARNING, no entry stored in dbm for [ENSG00000245275.8] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000218048.2] WARNING, no entry stored in dbm for [ENSG00000236360.2] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000230116.1] WARNING, no entry stored in dbm for [ENSG00000239881.1] WARNING, no entry stored in dbm for [ENSG00000228665.2] WARNING, no entry stored in dbm for [ENSG00000220848.5] WARNING, no entry stored in dbm for [ENSG00000228568.1] WARNING, no entry stored in dbm for [ENSG00000249859.12] WARNING, no entry stored in dbm for [ENSG00000238069.1] WARNING, no entry stored in dbm for [ENSG00000244705.1] WARNING, no entry stored in dbm for [ENSG00000243517.1] WARNING, no entry stored in dbm for [ENSG00000229235.1] WARNING, no entry stored in dbm for [ENSG00000241282.1] WARNING, no entry stored in dbm for [ENSG00000236489.1] WARNING, no entry stored in dbm for [ENSG00000242321.1] WARNING, no entry stored in dbm for [ENSG00000225661.7] WARNING, no entry stored in dbm for [ENSG00000139239.7] WARNING, no entry stored in dbm for [ENSG00000231322.5] WARNING, no entry stored in dbm for [ENSG00000257556.2] WARNING, no entry stored in dbm for [ENSG00000178464.6] WARNING, no entry stored in dbm for [ENSG00000199805.1] WARNING, no entry stored in dbm for [ENSG00000275132.1] WARNING, no entry stored in dbm for [ENSG00000278834.1] WARNING, no entry stored in dbm for [ENSG00000277549.1] WARNING, no entry stored in dbm for [ENSG00000251513.2] WARNING, no entry stored in dbm for [ENSG00000111788.10] WARNING, no entry stored in dbm for [ENSG00000251185.1] WARNING, no entry stored in dbm for [ENSG00000266258.1] WARNING, no entry stored in dbm for [ENSG00000237493.3] WARNING, no entry stored in dbm for [ENSG00000214425.8] WARNING, no entry stored in dbm for [ENSG00000214425.8] WARNING, no entry stored in dbm for [ENSG00000205771.6] WARNING, no entry stored in dbm for [ENSG00000228714.4] WARNING, no entry stored in dbm for [ENSG00000257225.1] WARNING, no entry stored in dbm for [ENSG00000218426.5] WARNING, no entry stored in dbm for [ENSG00000128262.8] WARNING, no entry stored in dbm for [ENSG00000241008.1] WARNING, no entry stored in dbm for [ENSG00000260128.6] WARNING, no entry stored in dbm for [ENSG00000078319.10] WARNING, no entry stored in dbm for [ENSG00000255401.1] WARNING, no entry stored in dbm for [ENSG00000223965.2] WARNING, no entry stored in dbm for [ENSG00000182347.10] WARNING, no entry stored in dbm for [ENSG00000261377.5] WARNING, no entry stored in dbm for [ENSG00000180229.12] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000180438.15] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000281692.2] WARNING, no entry stored in dbm for [ENSG00000254951.7] WARNING, no entry stored in dbm for [ENSG00000176904.3] WARNING, no entry stored in dbm for [ENSG00000258853.1] WARNING, no entry stored in dbm for [ENSG00000262837.1] WARNING, no entry stored in dbm for [ENSG00000223482.8] WARNING, no entry stored in dbm for [ENSG00000213742.7] WARNING, no entry stored in dbm for [ENSG00000258343.2] WARNING, no entry stored in dbm for [ENSG00000189275.4] WARNING, no entry stored in dbm for [ENSG00000197085.11] WARNING, no entry stored in dbm for [ENSG00000213925.3] WARNING, no entry stored in dbm for [ENSG00000214807.2] WARNING, no entry stored in dbm for [ENSG00000226703.1] WARNING, no entry stored in dbm for [ENSG00000255825.1] WARNING, no entry stored in dbm for [ENSG00000255825.1] WARNING, no entry stored in dbm for [ENSG00000255825.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000207181.1] WARNING, no entry stored in dbm for [ENSG00000203875.13] WARNING, no entry stored in dbm for [ENSG00000236051.7] WARNING, no entry stored in dbm for [ENSG00000236703.1] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000285902.1] WARNING, no entry stored in dbm for [ENSG00000257285.6] WARNING, no entry stored in dbm for [ENSG00000215105.4] WARNING, no entry stored in dbm for [ENSG00000251141.6] WARNING, no entry stored in dbm for [ENSG00000286187.1] WARNING, no entry stored in dbm for [ENSG00000228340.6] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000234231.4] WARNING, no entry stored in dbm for [ENSG00000266019.1] WARNING, no entry stored in dbm for [ENSG00000221792.1] WARNING, no entry stored in dbm for [ENSG00000255248.9] WARNING, no entry stored in dbm for [ENSG00000229881.1] WARNING, no entry stored in dbm for [ENSG00000253557.6] WARNING, no entry stored in dbm for [ENSG00000235142.10] WARNING, no entry stored in dbm for [ENSG00000225791.7] WARNING, no entry stored in dbm for [ENSG00000231999.7] WARNING, no entry stored in dbm for [ENSG00000067601.8] WARNING, no entry stored in dbm for [ENSG00000255008.3] WARNING, no entry stored in dbm for [ENSG00000250754.6] WARNING, no entry stored in dbm for [ENSG00000253490.5] WARNING, no entry stored in dbm for [ENSG00000262188.2] WARNING, no entry stored in dbm for [ENSG00000251675.1] WARNING, no entry stored in dbm for [ENSG00000226125.2] WARNING, no entry stored in dbm for [ENSG00000233907.1] WARNING, no entry stored in dbm for [ENSG00000261326.4] WARNING, no entry stored in dbm for [ENSG00000233806.7] WARNING, no entry stored in dbm for [ENSG00000281162.2] WARNING, no entry stored in dbm for [ENSG00000233723.9] WARNING, no entry stored in dbm for [ENSG00000237945.7] WARNING, no entry stored in dbm for [ENSG00000258735.1] WARNING, no entry stored in dbm for [ENSG00000226240.2] WARNING, no entry stored in dbm for [ENSG00000283945.1] WARNING, no entry stored in dbm for [ENSG00000231721.7] WARNING, no entry stored in dbm for [ENSG00000231721.7] WARNING, no entry stored in dbm for [ENSG00000267690.1] WARNING, no entry stored in dbm for [ENSG00000249064.1] WARNING, no entry stored in dbm for [ENSG00000131885.17] WARNING, no entry stored in dbm for [ENSG00000229526.2] WARNING, no entry stored in dbm for [ENSG00000229526.2] WARNING, no entry stored in dbm for [ENSG00000217811.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000246174.9] WARNING, no entry stored in dbm for [ENSG00000252835.1] WARNING, no entry stored in dbm for [ENSG00000261305.2] WARNING, no entry stored in dbm for [ENSG00000270760.1] WARNING, no entry stored in dbm for [ENSG00000214617.9] WARNING, no entry stored in dbm for [ENSG00000254034.2] WARNING, no entry stored in dbm for [ENSG00000286675.1] WARNING, no entry stored in dbm for [ENSG00000228013.1] WARNING, no entry stored in dbm for [ENSG00000235821.1] WARNING, no entry stored in dbm for [ENSG00000285219.2] WARNING, no entry stored in dbm for [ENSG00000223855.2] WARNING, no entry stored in dbm for [ENSG00000223855.2] WARNING, no entry stored in dbm for [ENSG00000234585.6] WARNING, no entry stored in dbm for [ENSG00000247373.3] WARNING, no entry stored in dbm for [ENSG00000267233.1] WARNING, no entry stored in dbm for [ENSG00000219102.3] WARNING, no entry stored in dbm for [ENSG00000255141.1] WARNING, no entry stored in dbm for [ENSG00000213412.3] WARNING, no entry stored in dbm for [ENSG00000270362.1] WARNING, no entry stored in dbm for [ENSG00000239128.1] WARNING, no entry stored in dbm for [ENSG00000117242.7] WARNING, no entry stored in dbm for [ENSG00000180229.12] WARNING, no entry stored in dbm for [ENSG00000287579.1] WARNING, no entry stored in dbm for [ENSG00000276550.4] WARNING, no entry stored in dbm for [ENSG00000279217.1] WARNING, no entry stored in dbm for [ENSG00000259845.1] WARNING, no entry stored in dbm for [ENSG00000260827.1] WARNING, no entry stored in dbm for [ENSG00000237224.4] WARNING, no entry stored in dbm for [ENSG00000240063.1] WARNING, no entry stored in dbm for [ENSG00000249489.1] WARNING, no entry stored in dbm for [ENSG00000250140.1] WARNING, no entry stored in dbm for [ENSG00000201441.1] WARNING, no entry stored in dbm for [ENSG00000272396.1] WARNING, no entry stored in dbm for [ENSG00000263343.1] WARNING, no entry stored in dbm for [ENSG00000270878.1] WARNING, no entry stored in dbm for [ENSG00000196295.12] WARNING, no entry stored in dbm for [ENSG00000228876.4] WARNING, no entry stored in dbm for [ENSG00000273888.1] WARNING, no entry stored in dbm for [ENSG00000255916.1] WARNING, no entry stored in dbm for [ENSG00000280660.1] WARNING, no entry stored in dbm for [ENSG00000255267.4] WARNING, no entry stored in dbm for [ENSG00000267696.6] WARNING, no entry stored in dbm for [ENSG00000255052.5] WARNING, no entry stored in dbm for [ENSG00000254016.3] WARNING, no entry stored in dbm for [ENSG00000227775.3] WARNING, no entry stored in dbm for [ENSG00000264044.1] WARNING, no entry stored in dbm for [ENSG00000180385.8] WARNING, no entry stored in dbm for [ENSG00000226472.8] WARNING, no entry stored in dbm for [ENSG00000237709.1] WARNING, no entry stored in dbm for [ENSG00000276805.2] WARNING, no entry stored in dbm for [ENSG00000230615.7] WARNING, no entry stored in dbm for [ENSG00000244306.11] WARNING, no entry stored in dbm for [ENSG00000230176.3] WARNING, no entry stored in dbm for [ENSG00000108958.4] WARNING, no entry stored in dbm for [ENSG00000259234.6] WARNING, no entry stored in dbm for [ENSG00000231952.3] WARNING, no entry stored in dbm for [ENSG00000228526.7] WARNING, no entry stored in dbm for [ENSG00000249780.1] WARNING, no entry stored in dbm for [ENSG00000240522.1] WARNING, no entry stored in dbm for [ENSG00000250011.1] WARNING, no entry stored in dbm for [ENSG00000237491.10] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000235244.4] WARNING, no entry stored in dbm for [ENSG00000257585.1] WARNING, no entry stored in dbm for [ENSG00000276077.4] WARNING, no entry stored in dbm for [ENSG00000250131.2] WARNING, no entry stored in dbm for [ENSG00000213036.3] WARNING, no entry stored in dbm for [ENSG00000257199.2] WARNING, no entry stored in dbm for [ENSG00000237773.7] WARNING, no entry stored in dbm for [ENSG00000230630.5] WARNING, no entry stored in dbm for [ENSG00000267583.5] WARNING, no entry stored in dbm for [ENSG00000235806.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000233355.7] WARNING, no entry stored in dbm for [ENSG00000185710.9] WARNING, no entry stored in dbm for [ENSG00000258526.7] WARNING, no entry stored in dbm for [ENSG00000266985.1] WARNING, no entry stored in dbm for [ENSG00000232077.2] WARNING, no entry stored in dbm for [ENSG00000285752.1] WARNING, no entry stored in dbm for [ENSG00000250182.3] WARNING, no entry stored in dbm for [ENSG00000204054.14] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000227742.2] WARNING, no entry stored in dbm for [ENSG00000286273.1] WARNING, no entry stored in dbm for [ENSG00000260924.2] WARNING, no entry stored in dbm for [ENSG00000260290.2] WARNING, no entry stored in dbm for [ENSG00000231698.2] WARNING, no entry stored in dbm for [ENSG00000271730.1] WARNING, no entry stored in dbm for [ENSG00000257735.1] WARNING, no entry stored in dbm for [ENSG00000283541.1] WARNING, no entry stored in dbm for [ENSG00000259006.1] WARNING, no entry stored in dbm for [ENSG00000276791.1] WARNING, no entry stored in dbm for [ENSG00000285705.1] WARNING, no entry stored in dbm for [ENSG00000244302.2] WARNING, no entry stored in dbm for [ENSG00000259856.1] WARNING, no entry stored in dbm for [ENSG00000223647.1] WARNING, no entry stored in dbm for [ENSG00000267470.6] WARNING, no entry stored in dbm for [ENSG00000229405.1] WARNING, no entry stored in dbm for [ENSG00000235919.4] WARNING, no entry stored in dbm for [ENSG00000267080.6] WARNING, no entry stored in dbm for [ENSG00000215409.4] WARNING, no entry stored in dbm for [ENSG00000243478.9] WARNING, no entry stored in dbm for [ENSG00000244198.7] WARNING, no entry stored in dbm for [ENSG00000256591.5] WARNING, no entry stored in dbm for [ENSG00000256779.2] WARNING, no entry stored in dbm for [ENSG00000249661.1] WARNING, no entry stored in dbm for [ENSG00000249519.1] WARNING, no entry stored in dbm for [ENSG00000275598.1] WARNING, no entry stored in dbm for [ENSG00000261019.1] WARNING, no entry stored in dbm for [ENSG00000254902.1] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000230006.7] WARNING, no entry stored in dbm for [ENSG00000230006.7] WARNING, no entry stored in dbm for [ENSG00000233237.8] WARNING, no entry stored in dbm for [ENSG00000228980.4] WARNING, no entry stored in dbm for [ENSG00000228339.1] WARNING, no entry stored in dbm for [ENSG00000262943.7] WARNING, no entry stored in dbm for [ENSG00000235085.3] WARNING, no entry stored in dbm for [ENSG00000234712.1] WARNING, no entry stored in dbm for [ENSG00000273333.2] WARNING, no entry stored in dbm for [ENSG00000270780.1] WARNING, no entry stored in dbm for [ENSG00000234589.4] WARNING, no entry stored in dbm for [ENSG00000217805.2] WARNING, no entry stored in dbm for [ENSG00000170161.7] WARNING, no entry stored in dbm for [ENSG00000228685.1] WARNING, no entry stored in dbm for [ENSG00000234851.4] WARNING, no entry stored in dbm for [ENSG00000230289.1] WARNING, no entry stored in dbm for [ENSG00000279096.2] WARNING, no entry stored in dbm for [ENSG00000259162.1] WARNING, no entry stored in dbm for [ENSG00000225489.7] WARNING, no entry stored in dbm for [ENSG00000224025.2] WARNING, no entry stored in dbm for [ENSG00000238110.1] WARNING, no entry stored in dbm for [ENSG00000225032.5] WARNING, no entry stored in dbm for [ENSG00000243155.1] WARNING, no entry stored in dbm for [ENSG00000258938.1] WARNING, no entry stored in dbm for [ENSG00000288583.1] WARNING, no entry stored in dbm for [ENSG00000287368.1] WARNING, no entry stored in dbm for [ENSG00000230490.3] WARNING, no entry stored in dbm for [ENSG00000235996.1] WARNING, no entry stored in dbm for [ENSG00000215022.7] WARNING, no entry stored in dbm for [ENSG00000170629.14] WARNING, no entry stored in dbm for [ENSG00000233955.1] WARNING, no entry stored in dbm for [ENSG00000254332.1] WARNING, no entry stored in dbm for [ENSG00000221643.1] WARNING, no entry stored in dbm for [ENSG00000188460.4] WARNING, no entry stored in dbm for [ENSG00000238039.1] WARNING, no entry stored in dbm for [ENSG00000259774.1] WARNING, no entry stored in dbm for [ENSG00000277702.1] WARNING, no entry stored in dbm for [ENSG00000277702.1] WARNING, no entry stored in dbm for [ENSG00000277702.1] WARNING, no entry stored in dbm for [ENSG00000002079.14] WARNING, no entry stored in dbm for [ENSG00000273598.1] WARNING, no entry stored in dbm for [ENSG00000286830.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000246596.7] WARNING, no entry stored in dbm for [ENSG00000251623.2] WARNING, no entry stored in dbm for [ENSG00000279107.1] WARNING, no entry stored in dbm for [ENSG00000254701.3] WARNING, no entry stored in dbm for [ENSG00000287935.1] WARNING, no entry stored in dbm for [ENSG00000215302.8] WARNING, no entry stored in dbm for [ENSG00000257398.8] WARNING, no entry stored in dbm for [ENSG00000248994.2] WARNING, no entry stored in dbm for [ENSG00000261744.1] WARNING, no entry stored in dbm for [ENSG00000234793.1] WARNING, no entry stored in dbm for [ENSG00000278791.1] WARNING, no entry stored in dbm for [ENSG00000274425.1] WARNING, no entry stored in dbm for [ENSG00000275374.1] WARNING, no entry stored in dbm for [ENSG00000249444.2] WARNING, no entry stored in dbm for [ENSG00000287067.1] WARNING, no entry stored in dbm for [ENSG00000245213.7] WARNING, no entry stored in dbm for [ENSG00000265218.1] WARNING, no entry stored in dbm for [ENSG00000272134.1] WARNING, no entry stored in dbm for [ENSG00000277096.1] WARNING, no entry stored in dbm for [ENSG00000269292.1] WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [ENSG00000276538.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000286269.1] WARNING, no entry stored in dbm for [ENSG00000266931.2] WARNING, no entry stored in dbm for [ENSG00000268362.6] WARNING, no entry stored in dbm for [ENSG00000265936.1] WARNING, no entry stored in dbm for [ENSG00000214259.3] WARNING, no entry stored in dbm for [ENSG00000253107.1] WARNING, no entry stored in dbm for [ENSG00000286892.1] WARNING, no entry stored in dbm for [ENSG00000204745.4] WARNING, no entry stored in dbm for [ENSG00000266931.2] WARNING, no entry stored in dbm for [ENSG00000284627.1] WARNING, no entry stored in dbm for [ENSG00000229337.2] WARNING, no entry stored in dbm for [ENSG00000259605.3] WARNING, no entry stored in dbm for [ENSG00000234072.1] WARNING, no entry stored in dbm for [ENSG00000283674.3] WARNING, no entry stored in dbm for [ENSG00000215244.3] WARNING, no entry stored in dbm for [ENSG00000266962.2] WARNING, no entry stored in dbm for [ENSG00000229212.8] WARNING, no entry stored in dbm for [ENSG00000257817.2] WARNING, no entry stored in dbm for [ENSG00000229119.3] WARNING, no entry stored in dbm for [ENSG00000235140.2] WARNING, no entry stored in dbm for [ENSG00000258053.1] WARNING, no entry stored in dbm for [ENSG00000250764.1] WARNING, no entry stored in dbm for [ENSG00000285600.1] WARNING, no entry stored in dbm for [ENSG00000287555.1] WARNING, no entry stored in dbm for [ENSG00000272140.2] WARNING, no entry stored in dbm for [ENSG00000251079.6] WARNING, no entry stored in dbm for [ENSG00000254777.5] WARNING, no entry stored in dbm for [ENSG00000272800.3] WARNING, no entry stored in dbm for [ENSG00000272267.2] WARNING, no entry stored in dbm for [ENSG00000280069.1] WARNING, no entry stored in dbm for [ENSG00000240418.1] WARNING, no entry stored in dbm for [ENSG00000279412.1] WARNING, no entry stored in dbm for [ENSG00000229852.4] WARNING, no entry stored in dbm for [ENSG00000281896.1] WARNING, no entry stored in dbm for [ENSG00000224316.1] WARNING, no entry stored in dbm for [ENSG00000253859.2] WARNING, no entry stored in dbm for [ENSG00000279637.1] WARNING, no entry stored in dbm for [ENSG00000234997.2] WARNING, no entry stored in dbm for [ENSG00000261329.6] WARNING, no entry stored in dbm for [ENSG00000267770.1] WARNING, no entry stored in dbm for [ENSG00000288604.1] WARNING, no entry stored in dbm for [ENSG00000257453.1] WARNING, no entry stored in dbm for [ENSG00000259790.1] WARNING, no entry stored in dbm for [ENSG00000287533.1] WARNING, no entry stored in dbm for [ENSG00000272180.1] WARNING, no entry stored in dbm for [ENSG00000240376.1] WARNING, no entry stored in dbm for [ENSG00000270277.1] WARNING, no entry stored in dbm for [ENSG00000259952.1] WARNING, no entry stored in dbm for [ENSG00000259706.1] WARNING, no entry stored in dbm for [ENSG00000259952.1] WARNING, no entry stored in dbm for [ENSG00000248733.1] WARNING, no entry stored in dbm for [ENSG00000254170.1] WARNING, no entry stored in dbm for [ENSG00000237875.1] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000257022.1] WARNING, no entry stored in dbm for [ENSG00000236494.2] WARNING, no entry stored in dbm for [ENSG00000273729.1] WARNING, no entry stored in dbm for [ENSG00000238165.1] WARNING, no entry stored in dbm for [ENSG00000238041.3] WARNING, no entry stored in dbm for [ENSG00000238165.1] WARNING, no entry stored in dbm for [ENSG00000225728.2] WARNING, no entry stored in dbm for [ENSG00000277458.1] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000261216.1] WARNING, no entry stored in dbm for [ENSG00000263004.2] WARNING, no entry stored in dbm for [ENSG00000246225.7] WARNING, no entry stored in dbm for [ENSG00000269968.1] WARNING, no entry stored in dbm for [ENSG00000226824.7] WARNING, no entry stored in dbm for [ENSG00000226824.7] WARNING, no entry stored in dbm for [ENSG00000266368.1] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000250778.1] WARNING, no entry stored in dbm for [ENSG00000241057.2] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000273419.1] WARNING, no entry stored in dbm for [ENSG00000249852.1] WARNING, no entry stored in dbm for [ENSG00000272768.1] WARNING, no entry stored in dbm for [ENSG00000268163.1] WARNING, no entry stored in dbm for [ENSG00000267698.1] WARNING, no entry stored in dbm for [ENSG00000237036.5] * STAR-Fusion complete. See output: /tmp/nxf.wPhYkeOZ69/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)