AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 581
Pass (FILTER=PASS): 21 (3.6%)
Fail (FILTER=FAIL): 560 (96.4%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 170
confidence_below_min(medium<high): 83
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 42
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 35
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 31
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 28
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 25
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 24
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 23
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 22
confidence_below_min(low<high): 18
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 15
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 6
Breakdown by confidence:
high: 21 pass, 8 fail (total: 29)
low: 0 pass, 321 fail (total: 321)
medium: 0 pass, 231 fail (total: 231)
Arriba filter: 581 rows -> 21 PASS; wrote 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filtered.tsv and 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filtered_pass_only.tsv
Summary written to: 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filter_summary.txt