Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/bc8177bcd3791bf903f657604a9ce6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/bc8177bcd3791bf903f657604a9ce6/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/60/6ac7fc752038154f7d5bf5d1d7be1f/1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/db5e1dea8127a58893270fcdffb5d0/1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1.sample_qc.tsv
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1/abundance.h5
Successfully converted 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1/abundance.h5 to 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1_kallisto_mqc.tsv
  Sample: 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_1
  Mean Fragment Length: 104.8 bp
  Median Fragment Length: 100.0 bp
  pct_mito_est_counts: 0.061%
  pct_ribo_est_counts: 1.55%
  pct_hk_est_counts: 0.508%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.117%
  pct_ribo_tpm: 4.359%
  pct_hk_tpm: 0.783%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 4.091%