File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/36/3fee7bd3f16ad0f91dadcc362fd8ea/.command.err
Size
564 bytes
Task
NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2)
Attempt

Content

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Processing Kallisto file: 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2/abundance.h5
Successfully converted 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2/abundance.h5 to 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2_kallisto_mqc.tsv
  Sample: 1173_D6K_T1_RNA_SLD_01_A23T55JLT4_2
  Mean Fragment Length: 131.5 bp
  Median Fragment Length: 122.0 bp
  pct_mito_est_counts: 0.008%
  pct_ribo_est_counts: 1.17%
  pct_hk_est_counts: 0.714%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.018%
  pct_ribo_tpm: 3.597%
  pct_hk_tpm: 1.044%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 5.67%