-ctat genome lib [/tmp/nxf.zsafMIKCYF/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.zsafMIKCYF/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary
-sample contains 293843791 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.zsafMIKCYF/ctat_genome_lib_build_dir  -J /tmp/nxf.zsafMIKCYF/1173_G2E_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction  -O /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.zsafMIKCYF/1173_G2E_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.zsafMIKCYF/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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-building interval tree based on /tmp/nxf.zsafMIKCYF/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[2710000], rate=47-building interval tree based on /tmp/nxf.zsafMIKCYF/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

[10000], rate=50000.00/min 
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-building interval tree based on /tmp/nxf.zsafMIKCYF/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[3990000], rate=45897.24/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.zsafMIKCYF/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

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 5669724.77 reads per min processed...  
 5672727.27 reads per min processed...  
 5625000.00 reads per min processed...  
 5628318.58 reads per min processed...  
 5631578.95 reads per min processed...  
 5634782.61 reads per min processed...  
 5637931.03 reads per min processed...  
 5641025.64 reads per min processed...  
 5596638.66 reads per min processed...  
 5600000.00 reads per min processed...  
 5603305.79 reads per min processed...  
 5606557.38 reads per min processed...  
 5609756.10 reads per min processed...  
 5612903.23 reads per min processed...  
 5616000.00 reads per min processed...  
 5619047.62 reads per min processed...  
 5622047.24 reads per min processed...  
 5625000.00 reads per min processed...  
 5584615.38 reads per min processed...  
 5587786.26 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.zsafMIKCYF/1173_G2E_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.zsafMIKCYF/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -1117512.585685
EM: Round [1] log likelihood: -1116904.940587
EM: Round [2] log likelihood: -1116680.941046
EM: Round [3] log likelihood: -1116575.834338
EM: Round [4] log likelihood: -1116520.346186
EM: Round [5] log likelihood: -1116488.875265
EM: Round [6] log likelihood: -1116470.003212
EM: Round [7] log likelihood: -1116458.102402
EM: Round [8] log likelihood: -1116450.237766
EM: Round [9] log likelihood: -1116444.813428
EM: Round [10] log likelihood: -1116440.927496
EM: Round [11] log likelihood: -1116438.050335
EM: Round [12] log likelihood: -1116435.858926
EM: Round [13] log likelihood: -1116434.148955
EM: Round [14] log likelihood: -1116432.786694
EM: Round [15] log likelihood: -1116431.681839
EM: Round [16] log likelihood: -1116430.771674
EM: Round [17] log likelihood: -1116430.011548
EM: Round [18] log likelihood: -1116429.368975
EM: Round [19] log likelihood: -1116428.819864
EM: Round [20] log likelihood: -1116428.346049
EM: Round [21] log likelihood: -1116427.933623
EM: Round [22] log likelihood: -1116427.571796
EM: Round [23] log likelihood: -1116427.252098
EM: Round [24] log likelihood: -1116426.967799
EM: Round [25] log likelihood: -1116426.713504
EM: Round [26] log likelihood: -1116426.484839
EM: Round [27] log likelihood: -1116426.278232
EM: Round [28] log likelihood: -1116426.090739
EM: Round [29] log likelihood: -1116425.919913
EM: Round [30] log likelihood: -1116425.763710
EM: Round [31] log likelihood: -1116425.620404
EM: Round [32] log likelihood: -1116425.488533
EM: Round [33] log likelihood: -1116425.366850
EM: Round [34] log likelihood: -1116425.254282
EM: Round [35] log likelihood: -1116425.149905
EM: Round [36] log likelihood: -1116425.052917
EM: Round [37] log likelihood: -1116424.962617
EM: Round [38] log likelihood: -1116424.878392
EM: Round [39] log likelihood: -1116424.799702
EM: Round [40] log likelihood: -1116424.726070
EM: Round [41] log likelihood: -1116424.657073
EM: Round [42] log likelihood: -1116424.592332
EM: Round [43] log likelihood: -1116424.531512
EM: Round [44] log likelihood: -1116424.474309
EM: Round [45] log likelihood: -1116424.420450
EM: Round [46] log likelihood: -1116424.369690
EM: Round [47] log likelihood: -1116424.321806
EM: Round [48] log likelihood: -1116424.276596
EM: Round [49] log likelihood: -1116424.233875
EM: Round [50] log likelihood: -1116424.193476
EM: Round [51] log likelihood: -1116424.155246
EM: Round [52] log likelihood: -1116424.119042
EM: Round [53] log likelihood: -1116424.084736
EM: Round [54] log likelihood: -1116424.052209
EM: Round [55] log likelihood: -1116424.021351
EM: Round [56] log likelihood: -1116423.992060
EM: Round [57] log likelihood: -1116423.964243
EM: Round [58] log likelihood: -1116423.937812
EM: Round [59] log likelihood: -1116423.912687
EM: Round [60] log likelihood: -1116423.888793
EM: Round [61] log likelihood: -1116423.866059
EM: Round [62] log likelihood: -1116423.844421
EM: Round [63] log likelihood: -1116423.823819
EM: Round [64] log likelihood: -1116423.804194
EM: Round [65] log likelihood: -1116423.785494
EM: Round [66] log likelihood: -1116423.767670
EM: Round [67] log likelihood: -1116423.750675
EM: Round [68] log likelihood: -1116423.734465
EM: Round [69] log likelihood: -1116423.718999
EM: Round [70] log likelihood: -1116423.704238
EM: Round [71] log likelihood: -1116423.690148
EM: Round [72] log likelihood: -1116423.676692
EM: Round [73] log likelihood: -1116423.663841
EM: Round [74] log likelihood: -1116423.651562
EM: Round [75] log likelihood: -1116423.639827
EM: Round [76] log likelihood: -1116423.628611
EM: Round [77] log likelihood: -1116423.617887
EM: Round [78] log likelihood: -1116423.607631
EM: Round [79] log likelihood: -1116423.597820
EM: Round [80] log likelihood: -1116423.588434
EM: Round [81] log likelihood: -1116423.579452
EM: Round [82] log likelihood: -1116423.570855
EM: Round [83] log likelihood: -1116423.562624
EM: Round [84] log likelihood: -1116423.554742
EM: Round [85] log likelihood: -1116423.547194
EM: Round [86] log likelihood: -1116423.539963
EM: Round [87] log likelihood: -1116423.533035
EM: Round [88] log likelihood: -1116423.526395
EM: Round [89] log likelihood: -1116423.520031
EM: Round [90] log likelihood: -1116423.513931
EM: Round [91] log likelihood: -1116423.508081
EM: Round [92] log likelihood: -1116423.502472
EM: Round [93] log likelihood: -1116423.497091
EM: Round [94] log likelihood: -1116423.491929
EM: Round [95] log likelihood: -1116423.486976
EM: Round [96] log likelihood: -1116423.482223
EM: Round [97] log likelihood: -1116423.477661
EM: Round [98] log likelihood: -1116423.473282
EM: Round [99] log likelihood: -1116423.469077
EM: Round [100] log likelihood: -1116423.465039
EM: Round [101] log likelihood: -1116423.461160
EM: Round [102] log likelihood: -1116423.457435
EM: Round [103] log likelihood: -1116423.453855
EM: Round [104] log likelihood: -1116423.450416
EM: Round [105] log likelihood: -1116423.447110
EM: Round [106] log likelihood: -1116423.443932
EM: Round [107] log likelihood: -1116423.440878
EM: Round [108] log likelihood: -1116423.437940
EM: Round [109] log likelihood: -1116423.435116
EM: Round [110] log likelihood: -1116423.432399
EM: Round [111] log likelihood: -1116423.429786
EM: Round [112] log likelihood: -1116423.427271
EM: Round [113] log likelihood: -1116423.424852
EM: Round [114] log likelihood: -1116423.422523
EM: Round [115] log likelihood: -1116423.420282
EM: Round [116] log likelihood: -1116423.418124
EM: Round [117] log likelihood: -1116423.416047
EM: Round [118] log likelihood: -1116423.414046
EM: Round [119] log likelihood: -1116423.412119
EM: Round [120] log likelihood: -1116423.410263
EM: Round [121] log likelihood: -1116423.408475
EM: Round [122] log likelihood: -1116423.406752
EM: Round [123] log likelihood: -1116423.405092
EM: Round [124] log likelihood: -1116423.403491
EM: Round [125] log likelihood: -1116423.401948
EM: Round [126] log likelihood: -1116423.400461
EM: Round [127] log likelihood: -1116423.399027
EM: Round [128] log likelihood: -1116423.397644
EM: Round [129] log likelihood: -1116423.396309
EM: Round [130] log likelihood: -1116423.395022
EM: Round [131] log likelihood: -1116423.393781
EM: Round [132] log likelihood: -1116423.392582
EM: Round [133] log likelihood: -1116423.391426
EM: Round [134] log likelihood: -1116423.390309
EM: Round [135] log likelihood: -1116423.389232
EM: Round [136] log likelihood: -1116423.388191
EM: Round [137] log likelihood: -1116423.387186
EM: Round [138] log likelihood: -1116423.386215
EM: Round [139] log likelihood: -1116423.385278
EM: Round [140] log likelihood: -1116423.384372
EM: Round [141] log likelihood: -1116423.383497
EM: Round [142] log likelihood: -1116423.382651
EM: Round [143] log likelihood: -1116423.381834
EM: Round [144] log likelihood: -1116423.381043
EM: Round [145] log likelihood: -1116423.380279
EM: Round [146] log likelihood: -1116423.379540
EM: Round [147] log likelihood: -1116423.378826
EM: Round [148] log likelihood: -1116423.378135
EM: Round [149] log likelihood: -1116423.377466
EM: Round [150] log likelihood: -1116423.376819
EM: Round [151] log likelihood: -1116423.376193
EM: Round [152] log likelihood: -1116423.375587
EM: Round [153] log likelihood: -1116423.375001
EM: Round [154] log likelihood: -1116423.374433
EM: Round [155] log likelihood: -1116423.373883
EM: Round [156] log likelihood: -1116423.373351
EM: Round [157] log likelihood: -1116423.372835
EM: Round [158] log likelihood: -1116423.372336
EM: Round [159] log likelihood: -1116423.371852
EM: Round [160] log likelihood: -1116423.371383
EM: Round [161] log likelihood: -1116423.370929
EM: Round [162] log likelihood: -1116423.370488
EM: Round [163] log likelihood: -1116423.370061
EM: Round [164] log likelihood: -1116423.369647
EM: Round [165] log likelihood: -1116423.369246
EM: Round [166] log likelihood: -1116423.368857
EM: Round [167] log likelihood: -1116423.368479
EM: Round [168] log likelihood: -1116423.368113
EM: Round [169] log likelihood: -1116423.367757
EM: Round [170] log likelihood: -1116423.367412
EM: Round [171] log likelihood: -1116423.367078
EM: Round [172] log likelihood: -1116423.366753
EM: Round [173] log likelihood: -1116423.366437
EM: Round [174] log likelihood: -1116423.366131
EM: Round [175] log likelihood: -1116423.365833
EM: Round [176] log likelihood: -1116423.365544
EM: Round [177] log likelihood: -1116423.365264
EM: Round [178] log likelihood: -1116423.364991
EM: Round [179] log likelihood: -1116423.364726
EM: Round [180] log likelihood: -1116423.364469
EM: Round [181] log likelihood: -1116423.364218
EM: Round [182] log likelihood: -1116423.363975
EM: Round [183] log likelihood: -1116423.363738
EM: Round [184] log likelihood: -1116423.363508
EM: Round [185] log likelihood: -1116423.363285
EM: Round [186] log likelihood: -1116423.363067
EM: Round [187] log likelihood: -1116423.362855
EM: Round [188] log likelihood: -1116423.362650
EM: Round [189] log likelihood: -1116423.362449
EM: Round [190] log likelihood: -1116423.362254
EM: Round [191] log likelihood: -1116423.362064
EM: Round [192] log likelihood: -1116423.361879
EM: Round [193] log likelihood: -1116423.361699
EM: Round [194] log likelihood: -1116423.361524
EM: Round [195] log likelihood: -1116423.361354
EM: Round [196] log likelihood: -1116423.361187
EM: Round [197] log likelihood: -1116423.361025
EM: Round [198] log likelihood: -1116423.360868
EM: Round [199] log likelihood: -1116423.360714
EM: Round [200] log likelihood: -1116423.360564
EM: Round [201] log likelihood: -1116423.360418
EM: Round [202] log likelihood: -1116423.360275
EM: Round [203] log likelihood: -1116423.360137
EM: Round [204] log likelihood: -1116423.360001
EM: Round [205] log likelihood: -1116423.359869
EM: Round [206] log likelihood: -1116423.359740
EM: Round [207] log likelihood: -1116423.359615
EM: Round [208] log likelihood: -1116423.359492
EM: Round [209] log likelihood: -1116423.359373
EM: Round [210] log likelihood: -1116423.359256
EM: Round [211] log likelihood: -1116423.359142
EM: Round [212] log likelihood: -1116423.359031
EM: Round [213] log likelihood: -1116423.358922
EM: Round [214] log likelihood: -1116423.358816
EM: Round [215] log likelihood: -1116423.358712
EM: Round [216] log likelihood: -1116423.358611
EM: Round [217] log likelihood: -1116423.358512
EM: Stopping iterations at round 217 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -1116149.386231
EM: Round [1] log likelihood: -1115639.189881
EM: Round [2] log likelihood: -1115457.064684
EM: Round [3] log likelihood: -1115373.589598
EM: Round [4] log likelihood: -1115330.375553
EM: Round [5] log likelihood: -1115306.249934
EM: Round [6] log likelihood: -1115291.960047
EM: Round [7] log likelihood: -1115283.040173
EM: Round [8] log likelihood: -1115277.199669
EM: Round [9] log likelihood: -1115273.207211
EM: Round [10] log likelihood: -1115270.372478
EM: Round [11] log likelihood: -1115268.292668
EM: Round [12] log likelihood: -1115266.723513
EM: Round [13] log likelihood: -1115265.511323
EM: Round [14] log likelihood: -1115264.555977
EM: Round [15] log likelihood: -1115263.790133
EM: Round [16] log likelihood: -1115263.167167
EM: Round [17] log likelihood: -1115262.653963
EM: Round [18] log likelihood: -1115262.226460
EM: Round [19] log likelihood: -1115261.866832
EM: Round [20] log likelihood: -1115261.561638
EM: Round [21] log likelihood: -1115261.300588
EM: Round [22] log likelihood: -1115261.075697
EM: Round [23] log likelihood: -1115260.880694
EM: Round [24] log likelihood: -1115260.710596
EM: Round [25] log likelihood: -1115260.561409
EM: Round [26] log likelihood: -1115260.429899
EM: Round [27] log likelihood: -1115260.313426
EM: Round [28] log likelihood: -1115260.209820
EM: Round [29] log likelihood: -1115260.117282
EM: Round [30] log likelihood: -1115260.034313
EM: Round [31] log likelihood: -1115259.959658
EM: Round [32] log likelihood: -1115259.892256
EM: Round [33] log likelihood: -1115259.831208
EM: Round [34] log likelihood: -1115259.775749
EM: Round [35] log likelihood: -1115259.725224
EM: Round [36] log likelihood: -1115259.679070
EM: Round [37] log likelihood: -1115259.636801
EM: Round [38] log likelihood: -1115259.597997
EM: Round [39] log likelihood: -1115259.562291
EM: Round [40] log likelihood: -1115259.529365
EM: Round [41] log likelihood: -1115259.498939
EM: Round [42] log likelihood: -1115259.470767
EM: Round [43] log likelihood: -1115259.444635
EM: Round [44] log likelihood: -1115259.420350
EM: Round [45] log likelihood: -1115259.397744
EM: Round [46] log likelihood: -1115259.376666
EM: Round [47] log likelihood: -1115259.356984
EM: Round [48] log likelihood: -1115259.338576
EM: Round [49] log likelihood: -1115259.321338
EM: Round [50] log likelihood: -1115259.305172
EM: Round [51] log likelihood: -1115259.289993
EM: Round [52] log likelihood: -1115259.275723
EM: Round [53] log likelihood: -1115259.262293
EM: Round [54] log likelihood: -1115259.249637
EM: Round [55] log likelihood: -1115259.237700
EM: Round [56] log likelihood: -1115259.226429
EM: Round [57] log likelihood: -1115259.215776
EM: Round [58] log likelihood: -1115259.205698
EM: Round [59] log likelihood: -1115259.196156
EM: Round [60] log likelihood: -1115259.187113
EM: Round [61] log likelihood: -1115259.178537
EM: Round [62] log likelihood: -1115259.170396
EM: Round [63] log likelihood: -1115259.162664
EM: Round [64] log likelihood: -1115259.155313
EM: Round [65] log likelihood: -1115259.148321
EM: Round [66] log likelihood: -1115259.141666
EM: Round [67] log likelihood: -1115259.135326
EM: Round [68] log likelihood: -1115259.129285
EM: Round [69] log likelihood: -1115259.123524
EM: Round [70] log likelihood: -1115259.118027
EM: Round [71] log likelihood: -1115259.112779
EM: Round [72] log likelihood: -1115259.107767
EM: Round [73] log likelihood: -1115259.102976
EM: Round [74] log likelihood: -1115259.098397
EM: Round [75] log likelihood: -1115259.094016
EM: Round [76] log likelihood: -1115259.089823
EM: Round [77] log likelihood: -1115259.085810
EM: Round [78] log likelihood: -1115259.081966
EM: Round [79] log likelihood: -1115259.078282
EM: Round [80] log likelihood: -1115259.074751
EM: Round [81] log likelihood: -1115259.071366
EM: Round [82] log likelihood: -1115259.068118
EM: Round [83] log likelihood: -1115259.065002
EM: Round [84] log likelihood: -1115259.062011
EM: Round [85] log likelihood: -1115259.059138
EM: Round [86] log likelihood: -1115259.056380
EM: Round [87] log likelihood: -1115259.053729
EM: Round [88] log likelihood: -1115259.051181
EM: Round [89] log likelihood: -1115259.048732
EM: Round [90] log likelihood: -1115259.046377
EM: Round [91] log likelihood: -1115259.044112
EM: Round [92] log likelihood: -1115259.041932
EM: Round [93] log likelihood: -1115259.039835
EM: Round [94] log likelihood: -1115259.037816
EM: Round [95] log likelihood: -1115259.035872
EM: Round [96] log likelihood: -1115259.034000
EM: Round [97] log likelihood: -1115259.032196
EM: Round [98] log likelihood: -1115259.030459
EM: Round [99] log likelihood: -1115259.028785
EM: Round [100] log likelihood: -1115259.027171
EM: Round [101] log likelihood: -1115259.025615
EM: Round [102] log likelihood: -1115259.024115
EM: Round [103] log likelihood: -1115259.022668
EM: Round [104] log likelihood: -1115259.021273
EM: Round [105] log likelihood: -1115259.019927
EM: Round [106] log likelihood: -1115259.018627
EM: Round [107] log likelihood: -1115259.017374
EM: Round [108] log likelihood: -1115259.016164
EM: Round [109] log likelihood: -1115259.014995
EM: Round [110] log likelihood: -1115259.013867
EM: Round [111] log likelihood: -1115259.012778
EM: Round [112] log likelihood: -1115259.011726
EM: Round [113] log likelihood: -1115259.010710
EM: Round [114] log likelihood: -1115259.009728
EM: Round [115] log likelihood: -1115259.008779
EM: Round [116] log likelihood: -1115259.007863
EM: Round [117] log likelihood: -1115259.006977
EM: Round [118] log likelihood: -1115259.006120
EM: Round [119] log likelihood: -1115259.005292
EM: Round [120] log likelihood: -1115259.004492
EM: Round [121] log likelihood: -1115259.003718
EM: Round [122] log likelihood: -1115259.002969
EM: Round [123] log likelihood: -1115259.002245
EM: Round [124] log likelihood: -1115259.001545
EM: Round [125] log likelihood: -1115259.000867
EM: Round [126] log likelihood: -1115259.000212
EM: Round [127] log likelihood: -1115258.999577
EM: Round [128] log likelihood: -1115258.998963
EM: Round [129] log likelihood: -1115258.998369
EM: Round [130] log likelihood: -1115258.997794
EM: Round [131] log likelihood: -1115258.997238
EM: Round [132] log likelihood: -1115258.996699
EM: Round [133] log likelihood: -1115258.996177
EM: Round [134] log likelihood: -1115258.995672
EM: Round [135] log likelihood: -1115258.995183
EM: Round [136] log likelihood: -1115258.994709
EM: Round [137] log likelihood: -1115258.994250
EM: Round [138] log likelihood: -1115258.993805
EM: Round [139] log likelihood: -1115258.993375
EM: Round [140] log likelihood: -1115258.992958
EM: Round [141] log likelihood: -1115258.992553
EM: Round [142] log likelihood: -1115258.992162
EM: Round [143] log likelihood: -1115258.991782
EM: Round [144] log likelihood: -1115258.991414
EM: Round [145] log likelihood: -1115258.991058
EM: Round [146] log likelihood: -1115258.990712
EM: Round [147] log likelihood: -1115258.990377
EM: Round [148] log likelihood: -1115258.990052
EM: Round [149] log likelihood: -1115258.989737
EM: Round [150] log likelihood: -1115258.989432
EM: Round [151] log likelihood: -1115258.989136
EM: Round [152] log likelihood: -1115258.988848
EM: Round [153] log likelihood: -1115258.988570
EM: Round [154] log likelihood: -1115258.988300
EM: Round [155] log likelihood: -1115258.988038
EM: Round [156] log likelihood: -1115258.987783
EM: Round [157] log likelihood: -1115258.987537
EM: Round [158] log likelihood: -1115258.987298
EM: Round [159] log likelihood: -1115258.987065
EM: Round [160] log likelihood: -1115258.986840
EM: Round [161] log likelihood: -1115258.986622
EM: Round [162] log likelihood: -1115258.986409
EM: Round [163] log likelihood: -1115258.986203
EM: Round [164] log likelihood: -1115258.986004
EM: Round [165] log likelihood: -1115258.985809
EM: Round [166] log likelihood: -1115258.985621
EM: Round [167] log likelihood: -1115258.985438
EM: Round [168] log likelihood: -1115258.985261
EM: Round [169] log likelihood: -1115258.985088
EM: Round [170] log likelihood: -1115258.984921
EM: Round [171] log likelihood: -1115258.984758
EM: Round [172] log likelihood: -1115258.984600
EM: Round [173] log likelihood: -1115258.984447
EM: Round [174] log likelihood: -1115258.984298
EM: Round [175] log likelihood: -1115258.984153
EM: Round [176] log likelihood: -1115258.984013
EM: Round [177] log likelihood: -1115258.983876
EM: Round [178] log likelihood: -1115258.983743
EM: Round [179] log likelihood: -1115258.983614
EM: Round [180] log likelihood: -1115258.983489
EM: Round [181] log likelihood: -1115258.983367
EM: Round [182] log likelihood: -1115258.983249
EM: Round [183] log likelihood: -1115258.983134
EM: Round [184] log likelihood: -1115258.983022
EM: Round [185] log likelihood: -1115258.982913
EM: Round [186] log likelihood: -1115258.982807
EM: Round [187] log likelihood: -1115258.982704
EM: Round [188] log likelihood: -1115258.982604
EM: Stopping iterations at round 188 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.zsafMIKCYF/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.zsafMIKCYF/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.zsafMIKCYF/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 293843791 > /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.zsafMIKCYF/ctat_genome_lib_build_dir > /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.zsafMIKCYF/ctat_genome_lib_build_dir --annotate /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.zsafMIKCYF/ctat_genome_lib_build_dir
-done, see /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.zsafMIKCYF/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 1474, filtered: 10112)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.zsafMIKCYF/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.zsafMIKCYF/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [IGH.g@-ext]
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WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [IGH-.g@-ext]
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WARNING, no entry stored in dbm for [IGL.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000225793.3]
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WARNING, no entry stored in dbm for [IGL.g@-ext]
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WARNING, no entry stored in dbm for [ENSG00000279006.1]
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WARNING, no entry stored in dbm for [ENSG00000213942.3]
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WARNING, no entry stored in dbm for [ENSG00000220540.1]
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WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000261691.1]
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WARNING, no entry stored in dbm for [ENSG00000232096.1]
WARNING, no entry stored in dbm for [ENSG00000179362.14]
WARNING, no entry stored in dbm for [ENSG00000264281.3]
WARNING, no entry stored in dbm for [ENSG00000185596.16]
WARNING, no entry stored in dbm for [ENSG00000266743.1]
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WARNING, no entry stored in dbm for [ENSG00000256642.1]
WARNING, no entry stored in dbm for [ENSG00000241473.1]
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WARNING, no entry stored in dbm for [ENSG00000226149.6]
WARNING, no entry stored in dbm for [ENSG00000225022.1]
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WARNING, no entry stored in dbm for [ENSG00000258648.1]
WARNING, no entry stored in dbm for [ENSG00000258648.1]
WARNING, no entry stored in dbm for [ENSG00000240477.1]
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WARNING, no entry stored in dbm for [ENSG00000226688.7]
WARNING, no entry stored in dbm for [ENSG00000108442.2]
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WARNING, no entry stored in dbm for [ENSG00000224186.8]
WARNING, no entry stored in dbm for [ENSG00000269680.1]
WARNING, no entry stored in dbm for [ENSG00000186466.5]
WARNING, no entry stored in dbm for [ENSG00000250427.1]
WARNING, no entry stored in dbm for [ENSG00000262454.4]
WARNING, no entry stored in dbm for [ENSG00000229989.4]
WARNING, no entry stored in dbm for [ENSG00000234241.1]
WARNING, no entry stored in dbm for [ENSG00000227722.2]
WARNING, no entry stored in dbm for [ENSG00000244198.7]
WARNING, no entry stored in dbm for [ENSG00000262420.3]
WARNING, no entry stored in dbm for [ENSG00000205215.8]
WARNING, no entry stored in dbm for [ENSG00000273973.1]
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WARNING, no entry stored in dbm for [ENSG00000248336.1]
WARNING, no entry stored in dbm for [ENSG00000224419.1]
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WARNING, no entry stored in dbm for [ENSG00000258741.4]
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WARNING, no entry stored in dbm for [ENSG00000286196.1]
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WARNING, no entry stored in dbm for [ENSG00000214558.4]
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WARNING, no entry stored in dbm for [ENSG00000229334.1]
WARNING, no entry stored in dbm for [ENSG00000163597.15]
WARNING, no entry stored in dbm for [ENSG00000240265.1]
WARNING, no entry stored in dbm for [ENSG00000225689.2]
WARNING, no entry stored in dbm for [ENSG00000234696.1]
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WARNING, no entry stored in dbm for [ENSG00000288541.1]
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WARNING, no entry stored in dbm for [ENSG00000286933.1]
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WARNING, no entry stored in dbm for [ENSG00000219273.1]
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WARNING, no entry stored in dbm for [ENSG00000229334.1]
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WARNING, no entry stored in dbm for [ENSG00000286970.1]
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WARNING, no entry stored in dbm for [ENSG00000241888.2]
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WARNING, no entry stored in dbm for [ENSG00000226205.1]
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WARNING, no entry stored in dbm for [ENSG00000229757.2]
WARNING, no entry stored in dbm for [ENSG00000239223.3]
WARNING, no entry stored in dbm for [ENSG00000220614.1]
WARNING, no entry stored in dbm for [ENSG00000240509.1]
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WARNING, no entry stored in dbm for [ENSG00000251474.6]
WARNING, no entry stored in dbm for [ENSG00000242993.1]
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WARNING, no entry stored in dbm for [ENSG00000269244.1]
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WARNING, no entry stored in dbm for [ENSG00000239199.1]
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WARNING, no entry stored in dbm for [ENSG00000263069.6]
WARNING, no entry stored in dbm for [ENSG00000241785.3]
WARNING, no entry stored in dbm for [ENSG00000223202.1]
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WARNING, no entry stored in dbm for [ENSG00000274471.2]
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WARNING, no entry stored in dbm for [ENSG00000259536.5]
WARNING, no entry stored in dbm for [ENSG00000227240.2]
WARNING, no entry stored in dbm for [ENSG00000286752.1]
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WARNING, no entry stored in dbm for [ENSG00000267348.3]
WARNING, no entry stored in dbm for [ENSG00000228862.4]
WARNING, no entry stored in dbm for [ENSG00000229419.1]
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WARNING, no entry stored in dbm for [ENSG00000280321.1]
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WARNING, no entry stored in dbm for [ENSG00000281005.1]
WARNING, no entry stored in dbm for [ENSG00000275374.1]
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WARNING, no entry stored in dbm for [ENSG00000230563.4]
WARNING, no entry stored in dbm for [ENSG00000226121.2]
WARNING, no entry stored in dbm for [ENSG00000250698.1]
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WARNING, no entry stored in dbm for [ENSG00000239556.4]
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WARNING, no entry stored in dbm for [ENSG00000228546.2]
WARNING, no entry stored in dbm for [ENSG00000250778.1]
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WARNING, no entry stored in dbm for [ENSG00000227621.1]
WARNING, no entry stored in dbm for [ENSG00000261441.1]
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WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000227906.8]
WARNING, no entry stored in dbm for [ENSG00000255185.6]
WARNING, no entry stored in dbm for [ENSG00000197171.6]
WARNING, no entry stored in dbm for [ENSG00000253331.1]
WARNING, no entry stored in dbm for [ENSG00000257433.6]
WARNING, no entry stored in dbm for [ENSG00000233647.2]
WARNING, no entry stored in dbm for [ENSG00000224413.1]
WARNING, no entry stored in dbm for [ENSG00000251504.1]
WARNING, no entry stored in dbm for [ENSG00000284689.1]
WARNING, no entry stored in dbm for [ENSG00000251178.1]
WARNING, no entry stored in dbm for [ENSG00000184669.9]
WARNING, no entry stored in dbm for [ENSG00000223705.9]
WARNING, no entry stored in dbm for [ENSG00000227036.8]
WARNING, no entry stored in dbm for [ENSG00000214807.2]
WARNING, no entry stored in dbm for [ENSG00000236008.3]
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WARNING, no entry stored in dbm for [ENSG00000278530.4]
WARNING, no entry stored in dbm for [ENSG00000266916.7]
WARNING, no entry stored in dbm for [ENSG00000287524.1]
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WARNING, no entry stored in dbm for [ENSG00000279991.1]
WARNING, no entry stored in dbm for [ENSG00000248660.1]
WARNING, no entry stored in dbm for [ENSG00000268293.1]
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WARNING, no entry stored in dbm for [ENSG00000131484.4]
WARNING, no entry stored in dbm for [ENSG00000273760.1]
WARNING, no entry stored in dbm for [ENSG00000249917.3]
WARNING, no entry stored in dbm for [ENSG00000247572.8]
WARNING, no entry stored in dbm for [ENSG00000228323.2]
WARNING, no entry stored in dbm for [ENSG00000224769.1]
WARNING, no entry stored in dbm for [ENSG00000287578.1]
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WARNING, no entry stored in dbm for [ENSG00000257165.5]
WARNING, no entry stored in dbm for [ENSG00000205361.8]
WARNING, no entry stored in dbm for [ENSG00000277287.1]
WARNING, no entry stored in dbm for [ENSG00000204352.4]
WARNING, no entry stored in dbm for [ENSG00000270670.1]
WARNING, no entry stored in dbm for [ENSG00000234060.1]
WARNING, no entry stored in dbm for [ENSG00000261971.8]
WARNING, no entry stored in dbm for [ENSG00000259240.1]
WARNING, no entry stored in dbm for [ENSG00000259240.1]
WARNING, no entry stored in dbm for [ENSG00000172965.17]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000265281.1]
WARNING, no entry stored in dbm for [ENSG00000266325.1]
WARNING, no entry stored in dbm for [ENSG00000231434.1]
WARNING, no entry stored in dbm for [ENSG00000253642.6]
WARNING, no entry stored in dbm for [ENSG00000214653.4]
WARNING, no entry stored in dbm for [ENSG00000238133.6]
WARNING, no entry stored in dbm for [ENSG00000206028.1]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000240418.1]
WARNING, no entry stored in dbm for [ENSG00000236039.3]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000228215.3]
WARNING, no entry stored in dbm for [ENSG00000204241.8]
WARNING, no entry stored in dbm for [ENSG00000175779.4]
WARNING, no entry stored in dbm for [ENSG00000232190.3]
WARNING, no entry stored in dbm for [ENSG00000248473.2]
WARNING, no entry stored in dbm for [ENSG00000231040.2]
WARNING, no entry stored in dbm for [ENSG00000255171.7]
WARNING, no entry stored in dbm for [ENSG00000241336.2]
WARNING, no entry stored in dbm for [ENSG00000237877.7]
WARNING, no entry stored in dbm for [ENSG00000236204.6]
WARNING, no entry stored in dbm for [ENSG00000226891.9]
WARNING, no entry stored in dbm for [ENSG00000204792.2]
WARNING, no entry stored in dbm for [ENSG00000235703.6]
WARNING, no entry stored in dbm for [ENSG00000238266.2]
WARNING, no entry stored in dbm for [ENSG00000232677.9]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000258279.4]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000236021.2]
WARNING, no entry stored in dbm for [ENSG00000229140.11]
WARNING, no entry stored in dbm for [ENSG00000267575.7]
WARNING, no entry stored in dbm for [ENSG00000224699.9]
WARNING, no entry stored in dbm for [ENSG00000225083.2]
WARNING, no entry stored in dbm for [ENSG00000180139.11]
WARNING, no entry stored in dbm for [ENSG00000224356.5]
WARNING, no entry stored in dbm for [ENSG00000231871.5]
WARNING, no entry stored in dbm for [ENSG00000214617.9]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000254034.2]
WARNING, no entry stored in dbm for [ENSG00000258860.1]
WARNING, no entry stored in dbm for [ENSG00000225886.3]
WARNING, no entry stored in dbm for [ENSG00000243048.3]
WARNING, no entry stored in dbm for [ENSG00000221817.10]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000282851.2]
WARNING, no entry stored in dbm for [ENSG00000259051.1]
WARNING, no entry stored in dbm for [ENSG00000235437.8]
WARNING, no entry stored in dbm for [ENSG00000236565.3]
WARNING, no entry stored in dbm for [ENSG00000257851.2]
WARNING, no entry stored in dbm for [ENSG00000269119.1]
WARNING, no entry stored in dbm for [ENSG00000232499.2]
WARNING, no entry stored in dbm for [ENSG00000241120.1]
WARNING, no entry stored in dbm for [ENSG00000276291.5]
WARNING, no entry stored in dbm for [ENSG00000253774.1]
WARNING, no entry stored in dbm for [ENSG00000217482.2]
WARNING, no entry stored in dbm for [ENSG00000236683.3]
WARNING, no entry stored in dbm for [ENSG00000225264.3]
WARNING, no entry stored in dbm for [ENSG00000258777.1]
WARNING, no entry stored in dbm for [ENSG00000248205.1]
WARNING, no entry stored in dbm for [ENSG00000259683.1]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000250903.9]
WARNING, no entry stored in dbm for [ENSG00000234741.8]
WARNING, no entry stored in dbm for [ENSG00000228312.1]
WARNING, no entry stored in dbm for [ENSG00000244630.2]
WARNING, no entry stored in dbm for [ENSG00000180211.5]
WARNING, no entry stored in dbm for [ENSG00000244097.1]
WARNING, no entry stored in dbm for [ENSG00000226258.7]
WARNING, no entry stored in dbm for [ENSG00000255075.1]
WARNING, no entry stored in dbm for [ENSG00000251600.8]
WARNING, no entry stored in dbm for [ENSG00000268926.3]
WARNING, no entry stored in dbm for [ENSG00000234709.2]
WARNING, no entry stored in dbm for [ENSG00000224397.7]
WARNING, no entry stored in dbm for [ENSG00000239467.6]
WARNING, no entry stored in dbm for [ENSG00000226433.2]
WARNING, no entry stored in dbm for [ENSG00000234678.2]
WARNING, no entry stored in dbm for [ENSG00000234678.2]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000237220.1]
WARNING, no entry stored in dbm for [ENSG00000227619.3]
WARNING, no entry stored in dbm for [ENSG00000170629.14]
WARNING, no entry stored in dbm for [ENSG00000225213.2]
WARNING, no entry stored in dbm for [ENSG00000237491.10]
WARNING, no entry stored in dbm for [ENSG00000233873.1]
WARNING, no entry stored in dbm for [ENSG00000276077.4]
WARNING, no entry stored in dbm for [ENSG00000266261.1]
WARNING, no entry stored in dbm for [ENSG00000242193.11]
WARNING, no entry stored in dbm for [ENSG00000242193.11]
WARNING, no entry stored in dbm for [ENSG00000100058.12]
WARNING, no entry stored in dbm for [ENSG00000186543.7]
WARNING, no entry stored in dbm for [ENSG00000237773.7]
WARNING, no entry stored in dbm for [ENSG00000262372.1]
WARNING, no entry stored in dbm for [ENSG00000224843.8]
WARNING, no entry stored in dbm for [ENSG00000218274.2]
WARNING, no entry stored in dbm for [ENSG00000283613.1]
WARNING, no entry stored in dbm for [ENSG00000283541.1]
WARNING, no entry stored in dbm for [ENSG00000278969.1]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000260213.6]
WARNING, no entry stored in dbm for [ENSG00000253961.1]
WARNING, no entry stored in dbm for [ENSG00000233681.1]
WARNING, no entry stored in dbm for [ENSG00000196312.15]
WARNING, no entry stored in dbm for [ENSG00000260528.5]
WARNING, no entry stored in dbm for [ENSG00000215117.6]
WARNING, no entry stored in dbm for [ENSG00000223773.7]
WARNING, no entry stored in dbm for [ENSG00000286277.1]
WARNING, no entry stored in dbm for [ENSG00000241032.3]
WARNING, no entry stored in dbm for [ENSG00000255856.2]
WARNING, no entry stored in dbm for [ENSG00000215867.4]
WARNING, no entry stored in dbm for [ENSG00000234997.2]
WARNING, no entry stored in dbm for [ENSG00000276517.1]
WARNING, no entry stored in dbm for [ENSG00000270792.6]
WARNING, no entry stored in dbm for [ENSG00000273145.1]
WARNING, no entry stored in dbm for [ENSG00000279954.1]
WARNING, no entry stored in dbm for [ENSG00000183171.5]
WARNING, no entry stored in dbm for [ENSG00000250961.2]
WARNING, no entry stored in dbm for [ENSG00000268120.1]
WARNING, no entry stored in dbm for [ENSG00000183506.17]
WARNING, no entry stored in dbm for [ENSG00000215580.11]
WARNING, no entry stored in dbm for [ENSG00000183171.5]
WARNING, no entry stored in dbm for [ENSG00000279428.1]
WARNING, no entry stored in dbm for [ENSG00000260111.1]
WARNING, no entry stored in dbm for [ENSG00000257746.2]
WARNING, no entry stored in dbm for [ENSG00000226592.1]
WARNING, no entry stored in dbm for [ENSG00000267189.1]
WARNING, no entry stored in dbm for [ENSG00000238002.3]
WARNING, no entry stored in dbm for [ENSG00000226835.3]
WARNING, no entry stored in dbm for [ENSG00000255284.2]
WARNING, no entry stored in dbm for [ENSG00000253332.1]
WARNING, no entry stored in dbm for [ENSG00000213979.3]
WARNING, no entry stored in dbm for [ENSG00000256591.5]
WARNING, no entry stored in dbm for [ENSG00000285388.1]
WARNING, no entry stored in dbm for [ENSG00000224431.1]
WARNING, no entry stored in dbm for [ENSG00000223784.2]
WARNING, no entry stored in dbm for [ENSG00000228980.4]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000243636.1]
WARNING, no entry stored in dbm for [ENSG00000234982.1]
WARNING, no entry stored in dbm for [ENSG00000226969.1]
WARNING, no entry stored in dbm for [ENSG00000227619.3]
WARNING, no entry stored in dbm for [ENSG00000217801.10]
WARNING, no entry stored in dbm for [ENSG00000270103.3]
WARNING, no entry stored in dbm for [ENSG00000234156.3]
WARNING, no entry stored in dbm for [ENSG00000247287.3]
WARNING, no entry stored in dbm for [ENSG00000247287.3]
WARNING, no entry stored in dbm for [ENSG00000279096.2]
WARNING, no entry stored in dbm for [ENSG00000234648.1]
WARNING, no entry stored in dbm for [ENSG00000285269.2]
WARNING, no entry stored in dbm for [ENSG00000287480.1]
WARNING, no entry stored in dbm for [ENSG00000197670.6]
WARNING, no entry stored in dbm for [ENSG00000230490.3]
WARNING, no entry stored in dbm for [ENSG00000278982.1]
WARNING, no entry stored in dbm for [ENSG00000258875.6]
WARNING, no entry stored in dbm for [ENSG00000287279.1]
WARNING, no entry stored in dbm for [ENSG00000223653.6]
WARNING, no entry stored in dbm for [ENSG00000270792.6]
WARNING, no entry stored in dbm for [ENSG00000284830.1]
WARNING, no entry stored in dbm for [ENSG00000285875.1]
WARNING, no entry stored in dbm for [ENSG00000233138.1]
WARNING, no entry stored in dbm for [ENSG00000271943.2]
WARNING, no entry stored in dbm for [ENSG00000279110.1]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000226310.1]
WARNING, no entry stored in dbm for [ENSG00000232599.1]
WARNING, no entry stored in dbm for [ENSG00000226555.1]
WARNING, no entry stored in dbm for [ENSG00000198221.10]
WARNING, no entry stored in dbm for [ENSG00000279390.1]
WARNING, no entry stored in dbm for [ENSG00000255945.1]
WARNING, no entry stored in dbm for [ENSG00000241473.1]
WARNING, no entry stored in dbm for [ENSG00000224481.3]
WARNING, no entry stored in dbm for [ENSG00000269354.1]
WARNING, no entry stored in dbm for [ENSG00000223612.3]
WARNING, no entry stored in dbm for [ENSG00000203825.4]
WARNING, no entry stored in dbm for [ENSG00000282572.2]
WARNING, no entry stored in dbm for [ENSG00000272556.2]
WARNING, no entry stored in dbm for [ENSG00000215899.3]
WARNING, no entry stored in dbm for [ENSG00000248943.1]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000259993.1]
WARNING, no entry stored in dbm for [ENSG00000278212.2]
WARNING, no entry stored in dbm for [ENSG00000259925.1]
WARNING, no entry stored in dbm for [ENSG00000215302.8]
WARNING, no entry stored in dbm for [ENSG00000250899.3]
WARNING, no entry stored in dbm for [ENSG00000233031.1]
WARNING, no entry stored in dbm for [ENSG00000284675.1]
WARNING, no entry stored in dbm for [ENSG00000224011.1]
WARNING, no entry stored in dbm for [ENSG00000213486.3]
WARNING, no entry stored in dbm for [ENSG00000249617.1]
WARNING, no entry stored in dbm for [ENSG00000249684.6]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000225794.3]
WARNING, no entry stored in dbm for [ENSG00000286266.1]
WARNING, no entry stored in dbm for [ENSG00000253667.2]
WARNING, no entry stored in dbm for [ENSG00000284648.1]
WARNING, no entry stored in dbm for [ENSG00000242759.8]
WARNING, no entry stored in dbm for [ENSG00000238018.2]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000285035.1]
WARNING, no entry stored in dbm for [ENSG00000262533.1]
WARNING, no entry stored in dbm for [ENSG00000245975.2]
WARNING, no entry stored in dbm for [ENSG00000204745.4]
WARNING, no entry stored in dbm for [ENSG00000237666.2]
WARNING, no entry stored in dbm for [ENSG00000285906.2]
WARNING, no entry stored in dbm for [ENSG00000240207.7]
WARNING, no entry stored in dbm for [ENSG00000240057.6]
WARNING, no entry stored in dbm for [ENSG00000271848.2]
WARNING, no entry stored in dbm for [ENSG00000287994.1]
WARNING, no entry stored in dbm for [ENSG00000283674.3]
WARNING, no entry stored in dbm for [ENSG00000257530.1]
WARNING, no entry stored in dbm for [ENSG00000257342.1]
WARNING, no entry stored in dbm for [ENSG00000267092.2]
WARNING, no entry stored in dbm for [ENSG00000232760.1]
WARNING, no entry stored in dbm for [ENSG00000257474.5]
WARNING, no entry stored in dbm for [ENSG00000257454.1]
WARNING, no entry stored in dbm for [ENSG00000250764.1]
WARNING, no entry stored in dbm for [ENSG00000261136.1]
WARNING, no entry stored in dbm for [ENSG00000287200.1]
WARNING, no entry stored in dbm for [ENSG00000266821.1]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000232386.9]
WARNING, no entry stored in dbm for [ENSG00000274499.1]
WARNING, no entry stored in dbm for [ENSG00000271936.1]
WARNING, no entry stored in dbm for [ENSG00000268573.1]
WARNING, no entry stored in dbm for [ENSG00000283897.2]
WARNING, no entry stored in dbm for [ENSG00000219159.4]
WARNING, no entry stored in dbm for [ENSG00000266561.2]
WARNING, no entry stored in dbm for [ENSG00000244398.1]
WARNING, no entry stored in dbm for [ENSG00000269439.6]
WARNING, no entry stored in dbm for [ENSG00000255399.4]
WARNING, no entry stored in dbm for [ENSG00000280121.1]
WARNING, no entry stored in dbm for [ENSG00000240207.7]
WARNING, no entry stored in dbm for [ENSG00000261037.1]
WARNING, no entry stored in dbm for [ENSG00000216895.9]
WARNING, no entry stored in dbm for [ENSG00000261385.1]
WARNING, no entry stored in dbm for [ENSG00000214331.8]
WARNING, no entry stored in dbm for [ENSG00000260905.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000270453.1]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000230305.2]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000272240.1]
WARNING, no entry stored in dbm for [ENSG00000244560.7]
WARNING, no entry stored in dbm for [ENSG00000263120.1]
WARNING, no entry stored in dbm for [ENSG00000228113.7]
WARNING, no entry stored in dbm for [ENSG00000284130.1]
WARNING, no entry stored in dbm for [ENSG00000284060.1]
WARNING, no entry stored in dbm for [ENSG00000260139.6]
WARNING, no entry stored in dbm for [ENSG00000280418.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.zsafMIKCYF/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)