Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c3/8a01865fc264b7eb024a48d4fb166b/1173_N5V_T1_RNA_SLD_01_A23T55JLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/54/928e2680adb1949fb97cd78ff9dc90/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/54/928e2680adb1949fb97cd78ff9dc90/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory