File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8f/f00700ccc15cbb3acb48d5dc94e0a3/.command.err
Size
565 bytes
Task
NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2)
Attempt

Content

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Processing Kallisto file: 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2/abundance.h5
Successfully converted 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2/abundance.h5 to 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2_kallisto_mqc.tsv
  Sample: 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2
  Mean Fragment Length: 109.6 bp
  Median Fragment Length: 105.0 bp
  pct_mito_est_counts: 0.03%
  pct_ribo_est_counts: 1.376%
  pct_hk_est_counts: 0.498%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.058%
  pct_ribo_tpm: 3.951%
  pct_hk_tpm: 0.785%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 3.915%