Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/98/8d05db806b1f1bbccfdb7e3f52db1c/1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2.sample_qc.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/7f3593f5323c756c525557b19b3c16/1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8f/f00700ccc15cbb3acb48d5dc94e0a3/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8f/f00700ccc15cbb3acb48d5dc94e0a3/.command.run
==> STAGING COMPLETE (4 inputs)

Processing Kallisto file: 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2/abundance.h5
Successfully converted 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2/abundance.h5 to 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2_kallisto_mqc.tsv
  Sample: 1173_F0Y_T1_RNA_SLD_01_A23T55JLT4_2
  Mean Fragment Length: 109.6 bp
  Median Fragment Length: 105.0 bp
  pct_mito_est_counts: 0.03%
  pct_ribo_est_counts: 1.376%
  pct_hk_est_counts: 0.498%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.058%
  pct_ribo_tpm: 3.951%
  pct_hk_tpm: 0.785%
  pct_male_tpm: 0.0%
  score_log2tpm1_mean_chry_signature: 3.915%