[W::hts_idx_load3] The index file is older than the data file: 1173_CI9_T1_RNA_SLD_01_A23T55JLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	173247362
Known Splicing Events:	171179141
Partial Novel Splicing Events:	1016388
Novel Splicing Events:	1018000
Filtered Splicing Events:	33833

Total splicing  Junctions:	395026
Known Splicing Junctions:	249061
Partial Novel Splicing Junctions:	107039
Novel Splicing Junctions:	38926

===================================================================
Create BED file ...
Create Interact file ...