.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a5/83da6a63ea5d6125b1a87d34a283fd/.command.log
Size: 724 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/5be018731276383dd239c637a1656c/1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1.md.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a5/83da6a63ea5d6125b1a87d34a283fd/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a5/83da6a63ea5d6125b1a87d34a283fd/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/5be018731276383dd239c637a1656c/1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1.md.bam
==> STAGING COMPLETE (4 inputs)

+ seqtool saturation -region chr20 1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1.md.bam
[W::hts_idx_load3] The index file is older than the data file: 1173_RPC_T1_RNA_SLD_01_A23T55JLT4_1.md.bai