-ctat genome lib [/tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.3bujw4M4f8/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary
-sample contains 79906347 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir  -J /tmp/nxf.3bujw4M4f8/1173_LAF_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction  -O /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.3bujw4M4f8/1173_LAF_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction
-building interval tree based on /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[2640-building interval tree based on /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

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[2630000-building interval tree based on /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.10 min).
-mapping reads to genes

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[4420000], rate=169024.86/min -building interval tree based on /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.12 min).
-mapping reads to genes

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[3160000], rate=105450.50/min 
[3170000], rate=105490.85/min 
[3180000], rate=105298.01/min 
[3190000], rate=105049.40/min 
[3200000], rate=104860.73/min 
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[3220000], rate=104319.65/min 
[3230000], rate=104025.76/min 
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[3250000], rate=103613.18/min 
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[3280000], rate=103198.74/min 
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[3390000], rate=102987.34/min 
[3400000], rate=103030.30/min 
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[3420000], rate=103271.26/min 
[3430000], rate=103365.14/min 
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[3460000], rate=103748.13/min 
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[3480000], rate=103932.30/min 
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[3500000], rate=104063.43/min 
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[3520000], rate=104399.41/min 
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[4420000], rate=104491.73/min 
[4430000], rate=104358.07/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

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done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.3bujw4M4f8/1173_LAF_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -551351.404580
EM: Round [1] log likelihood: -550108.505626
EM: Round [2] log likelihood: -549708.148837
EM: Round [3] log likelihood: -549533.065990
EM: Round [4] log likelihood: -549443.987322
EM: Round [5] log likelihood: -549394.553129
EM: Round [6] log likelihood: -549365.356690
EM: Round [7] log likelihood: -549347.172113
EM: Round [8] log likelihood: -549335.288241
EM: Round [9] log likelihood: -549327.178136
EM: Round [10] log likelihood: -549321.427785
EM: Round [11] log likelihood: -549317.213441
EM: Round [12] log likelihood: -549314.036263
EM: Round [13] log likelihood: -549311.582833
EM: Round [14] log likelihood: -549309.649337
EM: Round [15] log likelihood: -549308.098977
EM: Round [16] log likelihood: -549306.837268
EM: Round [17] log likelihood: -549305.797248
EM: Round [18] log likelihood: -549304.930366
EM: Round [19] log likelihood: -549304.200701
EM: Round [20] log likelihood: -549303.581194
EM: Round [21] log likelihood: -549303.051133
EM: Round [22] log likelihood: -549302.594444
EM: Round [23] log likelihood: -549302.198488
EM: Round [24] log likelihood: -549301.853216
EM: Round [25] log likelihood: -549301.550555
EM: Round [26] log likelihood: -549301.283961
EM: Round [27] log likelihood: -549301.048081
EM: Round [28] log likelihood: -549300.838506
EM: Round [29] log likelihood: -549300.651578
EM: Round [30] log likelihood: -549300.484242
EM: Round [31] log likelihood: -549300.333931
EM: Round [32] log likelihood: -549300.198477
EM: Round [33] log likelihood: -549300.076040
EM: Round [34] log likelihood: -549299.965050
EM: Round [35] log likelihood: -549299.864162
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EM: Round [37] log likelihood: -549299.688220
EM: Round [38] log likelihood: -549299.611301
EM: Round [39] log likelihood: -549299.540707
EM: Round [40] log likelihood: -549299.475779
EM: Round [41] log likelihood: -549299.415943
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EM: Round [47] log likelihood: -549299.139283
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EM: Round [50] log likelihood: -549299.039594
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EM: Round [52] log likelihood: -549298.983312
EM: Round [53] log likelihood: -549298.957742
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EM: Round [55] log likelihood: -549298.911095
EM: Round [56] log likelihood: -549298.889793
EM: Round [57] log likelihood: -549298.869706
EM: Round [58] log likelihood: -549298.850744
EM: Round [59] log likelihood: -549298.832829
EM: Round [60] log likelihood: -549298.815885
EM: Round [61] log likelihood: -549298.799846
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EM: Round [63] log likelihood: -549298.770241
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EM: Round [68] log likelihood: -549298.708310
EM: Round [69] log likelihood: -549298.697662
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EM: Round [72] log likelihood: -549298.668586
EM: Round [73] log likelihood: -549298.659759
EM: Round [74] log likelihood: -549298.651323
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EM: Round [77] log likelihood: -549298.628150
EM: Round [78] log likelihood: -549298.621073
EM: Round [79] log likelihood: -549298.614291
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EM: Round [81] log likelihood: -549298.601548
EM: Round [82] log likelihood: -549298.595560
EM: Round [83] log likelihood: -549298.589810
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EM: Round [86] log likelihood: -549298.573870
EM: Round [87] log likelihood: -549298.568958
EM: Round [88] log likelihood: -549298.564231
EM: Round [89] log likelihood: -549298.559679
EM: Round [90] log likelihood: -549298.555296
EM: Round [91] log likelihood: -549298.551071
EM: Round [92] log likelihood: -549298.547000
EM: Round [93] log likelihood: -549298.543073
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EM: Round [96] log likelihood: -549298.532103
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EM: Round [98] log likelihood: -549298.525404
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EM: Round [100] log likelihood: -549298.519150
EM: Round [101] log likelihood: -549298.516177
EM: Round [102] log likelihood: -549298.513303
EM: Round [103] log likelihood: -549298.510521
EM: Round [104] log likelihood: -549298.507829
EM: Round [105] log likelihood: -549298.505224
EM: Round [106] log likelihood: -549298.502700
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EM: Round [121] log likelihood: -549298.472856
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EM: Round [141] log likelihood: -549298.448494
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EM: Round [144] log likelihood: -549298.445816
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EM: Round [146] log likelihood: -549298.444139
EM: Round [147] log likelihood: -549298.443331
EM: Round [148] log likelihood: -549298.442542
EM: Round [149] log likelihood: -549298.441772
EM: Round [150] log likelihood: -549298.441021
EM: Round [151] log likelihood: -549298.440288
EM: Round [152] log likelihood: -549298.439572
EM: Round [153] log likelihood: -549298.438872
EM: Round [154] log likelihood: -549298.438189
EM: Round [155] log likelihood: -549298.437523
EM: Round [156] log likelihood: -549298.436871
EM: Round [157] log likelihood: -549298.436235
EM: Round [158] log likelihood: -549298.435614
EM: Round [159] log likelihood: -549298.435006
EM: Round [160] log likelihood: -549298.434413
EM: Round [161] log likelihood: -549298.433833
EM: Round [162] log likelihood: -549298.433266
EM: Round [163] log likelihood: -549298.432712
EM: Round [164] log likelihood: -549298.432171
EM: Round [165] log likelihood: -549298.431641
EM: Round [166] log likelihood: -549298.431124
EM: Round [167] log likelihood: -549298.430618
EM: Round [168] log likelihood: -549298.430123
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EM: Round [170] log likelihood: -549298.429166
EM: Round [171] log likelihood: -549298.428703
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EM: Round [177] log likelihood: -549298.426129
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EM: Round [179] log likelihood: -549298.425343
EM: Round [180] log likelihood: -549298.424962
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EM: Round [182] log likelihood: -549298.424225
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EM: Round [185] log likelihood: -549298.423176
EM: Round [186] log likelihood: -549298.422841
EM: Round [187] log likelihood: -549298.422513
EM: Round [188] log likelihood: -549298.422191
EM: Round [189] log likelihood: -549298.421877
EM: Round [190] log likelihood: -549298.421568
EM: Round [191] log likelihood: -549298.421266
EM: Round [192] log likelihood: -549298.420971
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EM: Round [194] log likelihood: -549298.420397
EM: Round [195] log likelihood: -549298.420119
EM: Round [196] log likelihood: -549298.419846
EM: Round [197] log likelihood: -549298.419579
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EM: Round [199] log likelihood: -549298.419061
EM: Round [200] log likelihood: -549298.418810
EM: Round [201] log likelihood: -549298.418564
EM: Round [202] log likelihood: -549298.418322
EM: Round [203] log likelihood: -549298.418086
EM: Round [204] log likelihood: -549298.417854
EM: Round [205] log likelihood: -549298.417627
EM: Round [206] log likelihood: -549298.417404
EM: Round [207] log likelihood: -549298.417185
EM: Round [208] log likelihood: -549298.416971
EM: Round [209] log likelihood: -549298.416761
EM: Round [210] log likelihood: -549298.416555
EM: Round [211] log likelihood: -549298.416353
EM: Round [212] log likelihood: -549298.416155
EM: Round [213] log likelihood: -549298.415961
EM: Round [214] log likelihood: -549298.415770
EM: Round [215] log likelihood: -549298.415583
EM: Round [216] log likelihood: -549298.415400
EM: Round [217] log likelihood: -549298.415220
EM: Round [218] log likelihood: -549298.415044
EM: Round [219] log likelihood: -549298.414871
EM: Round [220] log likelihood: -549298.414701
EM: Round [221] log likelihood: -549298.414535
EM: Round [222] log likelihood: -549298.414371
EM: Round [223] log likelihood: -549298.414211
EM: Round [224] log likelihood: -549298.414054
EM: Round [225] log likelihood: -549298.413900
EM: Round [226] log likelihood: -549298.413748
EM: Round [227] log likelihood: -549298.413600
EM: Round [228] log likelihood: -549298.413454
EM: Round [229] log likelihood: -549298.413311
EM: Round [230] log likelihood: -549298.413170
EM: Round [231] log likelihood: -549298.413033
EM: Round [232] log likelihood: -549298.412897
EM: Round [233] log likelihood: -549298.412764
EM: Round [234] log likelihood: -549298.412634
EM: Round [235] log likelihood: -549298.412506
EM: Round [236] log likelihood: -549298.412380
EM: Round [237] log likelihood: -549298.412257
EM: Round [238] log likelihood: -549298.412136
EM: Round [239] log likelihood: -549298.412017
EM: Round [240] log likelihood: -549298.411900
EM: Round [241] log likelihood: -549298.411786
EM: Round [242] log likelihood: -549298.411673
EM: Round [243] log likelihood: -549298.411563
EM: Round [244] log likelihood: -549298.411454
EM: Round [245] log likelihood: -549298.411348
EM: Round [246] log likelihood: -549298.411243
EM: Round [247] log likelihood: -549298.411140
EM: Round [248] log likelihood: -549298.411039
EM: Round [249] log likelihood: -549298.410940
EM: Stopping iterations at round 249 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -550684.921159
EM: Round [1] log likelihood: -549593.929013
EM: Round [2] log likelihood: -549249.867999
EM: Round [3] log likelihood: -549100.998928
EM: Round [4] log likelihood: -549025.788311
EM: Round [5] log likelihood: -548984.248463
EM: Round [6] log likelihood: -548959.795660
EM: Round [7] log likelihood: -548944.603242
EM: Round [8] log likelihood: -548934.695758
EM: Round [9] log likelihood: -548927.948581
EM: Round [10] log likelihood: -548923.175525
EM: Round [11] log likelihood: -548919.686461
EM: Round [12] log likelihood: -548917.063731
EM: Round [13] log likelihood: -548915.044981
EM: Round [14] log likelihood: -548913.459611
EM: Round [15] log likelihood: -548912.193116
EM: Round [16] log likelihood: -548911.166419
EM: Round [17] log likelihood: -548910.323497
EM: Round [18] log likelihood: -548909.623758
EM: Round [19] log likelihood: -548909.037194
EM: Round [20] log likelihood: -548908.541229
EM: Round [21] log likelihood: -548908.118610
EM: Round [22] log likelihood: -548907.755968
EM: Round [23] log likelihood: -548907.442812
EM: Round [24] log likelihood: -548907.170819
EM: Round [25] log likelihood: -548906.933317
EM: Round [26] log likelihood: -548906.724909
EM: Round [27] log likelihood: -548906.541194
EM: Round [28] log likelihood: -548906.378556
EM: Round [29] log likelihood: -548906.234000
EM: Round [30] log likelihood: -548906.105033
EM: Round [31] log likelihood: -548905.989566
EM: Round [32] log likelihood: -548905.885841
EM: Round [33] log likelihood: -548905.792366
EM: Round [34] log likelihood: -548905.707877
EM: Round [35] log likelihood: -548905.631288
EM: Round [36] log likelihood: -548905.561673
EM: Round [37] log likelihood: -548905.498231
EM: Round [38] log likelihood: -548905.440271
EM: Round [39] log likelihood: -548905.387193
EM: Round [40] log likelihood: -548905.338475
EM: Round [41] log likelihood: -548905.293661
EM: Round [42] log likelihood: -548905.252352
EM: Round [43] log likelihood: -548905.214197
EM: Round [44] log likelihood: -548905.178888
EM: Round [45] log likelihood: -548905.146151
EM: Round [46] log likelihood: -548905.115747
EM: Round [47] log likelihood: -548905.087459
EM: Round [48] log likelihood: -548905.061098
EM: Round [49] log likelihood: -548905.036493
EM: Round [50] log likelihood: -548905.013492
EM: Round [51] log likelihood: -548904.991960
EM: Round [52] log likelihood: -548904.971773
EM: Round [53] log likelihood: -548904.952823
EM: Round [54] log likelihood: -548904.935009
EM: Round [55] log likelihood: -548904.918243
EM: Round [56] log likelihood: -548904.902444
EM: Round [57] log likelihood: -548904.887538
EM: Round [58] log likelihood: -548904.873459
EM: Round [59] log likelihood: -548904.860146
EM: Round [60] log likelihood: -548904.847544
EM: Round [61] log likelihood: -548904.835603
EM: Round [62] log likelihood: -548904.824277
EM: Round [63] log likelihood: -548904.813523
EM: Round [64] log likelihood: -548904.803305
EM: Round [65] log likelihood: -548904.793585
EM: Round [66] log likelihood: -548904.784332
EM: Round [67] log likelihood: -548904.775516
EM: Round [68] log likelihood: -548904.767109
EM: Round [69] log likelihood: -548904.759086
EM: Round [70] log likelihood: -548904.751423
EM: Round [71] log likelihood: -548904.744099
EM: Round [72] log likelihood: -548904.737095
EM: Round [73] log likelihood: -548904.730390
EM: Round [74] log likelihood: -548904.723969
EM: Round [75] log likelihood: -548904.717815
EM: Round [76] log likelihood: -548904.711913
EM: Round [77] log likelihood: -548904.706249
EM: Round [78] log likelihood: -548904.700811
EM: Round [79] log likelihood: -548904.695586
EM: Round [80] log likelihood: -548904.690564
EM: Round [81] log likelihood: -548904.685734
EM: Round [82] log likelihood: -548904.681085
EM: Round [83] log likelihood: -548904.676610
EM: Round [84] log likelihood: -548904.672299
EM: Round [85] log likelihood: -548904.668144
EM: Round [86] log likelihood: -548904.664138
EM: Round [87] log likelihood: -548904.660273
EM: Round [88] log likelihood: -548904.656544
EM: Round [89] log likelihood: -548904.652944
EM: Round [90] log likelihood: -548904.649466
EM: Round [91] log likelihood: -548904.646106
EM: Round [92] log likelihood: -548904.642857
EM: Round [93] log likelihood: -548904.639716
EM: Round [94] log likelihood: -548904.636678
EM: Round [95] log likelihood: -548904.633738
EM: Round [96] log likelihood: -548904.630891
EM: Round [97] log likelihood: -548904.628135
EM: Round [98] log likelihood: -548904.625465
EM: Round [99] log likelihood: -548904.622878
EM: Round [100] log likelihood: -548904.620370
EM: Round [101] log likelihood: -548904.617939
EM: Round [102] log likelihood: -548904.615580
EM: Round [103] log likelihood: -548904.613293
EM: Round [104] log likelihood: -548904.611073
EM: Round [105] log likelihood: -548904.608918
EM: Round [106] log likelihood: -548904.606826
EM: Round [107] log likelihood: -548904.604794
EM: Round [108] log likelihood: -548904.602820
EM: Round [109] log likelihood: -548904.600903
EM: Round [110] log likelihood: -548904.599039
EM: Round [111] log likelihood: -548904.597227
EM: Round [112] log likelihood: -548904.595466
EM: Round [113] log likelihood: -548904.593753
EM: Round [114] log likelihood: -548904.592087
EM: Round [115] log likelihood: -548904.590466
EM: Round [116] log likelihood: -548904.588889
EM: Round [117] log likelihood: -548904.587353
EM: Round [118] log likelihood: -548904.585859
EM: Round [119] log likelihood: -548904.584404
EM: Round [120] log likelihood: -548904.582987
EM: Round [121] log likelihood: -548904.581607
EM: Round [122] log likelihood: -548904.580263
EM: Round [123] log likelihood: -548904.578953
EM: Round [124] log likelihood: -548904.577677
EM: Round [125] log likelihood: -548904.576433
EM: Round [126] log likelihood: -548904.575221
EM: Round [127] log likelihood: -548904.574039
EM: Round [128] log likelihood: -548904.572887
EM: Round [129] log likelihood: -548904.571763
EM: Round [130] log likelihood: -548904.570667
EM: Round [131] log likelihood: -548904.569598
EM: Round [132] log likelihood: -548904.568555
EM: Round [133] log likelihood: -548904.567537
EM: Round [134] log likelihood: -548904.566544
EM: Round [135] log likelihood: -548904.565575
EM: Round [136] log likelihood: -548904.564629
EM: Round [137] log likelihood: -548904.563706
EM: Round [138] log likelihood: -548904.562805
EM: Round [139] log likelihood: -548904.561924
EM: Round [140] log likelihood: -548904.561065
EM: Round [141] log likelihood: -548904.560226
EM: Round [142] log likelihood: -548904.559406
EM: Round [143] log likelihood: -548904.558605
EM: Round [144] log likelihood: -548904.557823
EM: Round [145] log likelihood: -548904.557059
EM: Round [146] log likelihood: -548904.556312
EM: Round [147] log likelihood: -548904.555582
EM: Round [148] log likelihood: -548904.554869
EM: Round [149] log likelihood: -548904.554172
EM: Round [150] log likelihood: -548904.553491
EM: Round [151] log likelihood: -548904.552825
EM: Round [152] log likelihood: -548904.552174
EM: Round [153] log likelihood: -548904.551537
EM: Round [154] log likelihood: -548904.550915
EM: Round [155] log likelihood: -548904.550306
EM: Round [156] log likelihood: -548904.549711
EM: Round [157] log likelihood: -548904.549129
EM: Round [158] log likelihood: -548904.548560
EM: Round [159] log likelihood: -548904.548003
EM: Round [160] log likelihood: -548904.547458
EM: Round [161] log likelihood: -548904.546925
EM: Round [162] log likelihood: -548904.546403
EM: Round [163] log likelihood: -548904.545893
EM: Round [164] log likelihood: -548904.545394
EM: Round [165] log likelihood: -548904.544905
EM: Round [166] log likelihood: -548904.544427
EM: Round [167] log likelihood: -548904.543959
EM: Round [168] log likelihood: -548904.543501
EM: Round [169] log likelihood: -548904.543052
EM: Round [170] log likelihood: -548904.542613
EM: Round [171] log likelihood: -548904.542183
EM: Round [172] log likelihood: -548904.541763
EM: Round [173] log likelihood: -548904.541351
EM: Round [174] log likelihood: -548904.540947
EM: Round [175] log likelihood: -548904.540552
EM: Round [176] log likelihood: -548904.540165
EM: Round [177] log likelihood: -548904.539787
EM: Round [178] log likelihood: -548904.539415
EM: Round [179] log likelihood: -548904.539052
EM: Round [180] log likelihood: -548904.538696
EM: Round [181] log likelihood: -548904.538347
EM: Round [182] log likelihood: -548904.538006
EM: Round [183] log likelihood: -548904.537671
EM: Round [184] log likelihood: -548904.537343
EM: Round [185] log likelihood: -548904.537022
EM: Round [186] log likelihood: -548904.536707
EM: Round [187] log likelihood: -548904.536399
EM: Round [188] log likelihood: -548904.536096
EM: Round [189] log likelihood: -548904.535800
EM: Round [190] log likelihood: -548904.535510
EM: Round [191] log likelihood: -548904.535225
EM: Round [192] log likelihood: -548904.534946
EM: Round [193] log likelihood: -548904.534673
EM: Round [194] log likelihood: -548904.534405
EM: Round [195] log likelihood: -548904.534142
EM: Round [196] log likelihood: -548904.533885
EM: Round [197] log likelihood: -548904.533632
EM: Round [198] log likelihood: -548904.533385
EM: Round [199] log likelihood: -548904.533142
EM: Round [200] log likelihood: -548904.532904
EM: Round [201] log likelihood: -548904.532671
EM: Round [202] log likelihood: -548904.532442
EM: Round [203] log likelihood: -548904.532218
EM: Round [204] log likelihood: -548904.531998
EM: Round [205] log likelihood: -548904.531782
EM: Round [206] log likelihood: -548904.531571
EM: Round [207] log likelihood: -548904.531363
EM: Round [208] log likelihood: -548904.531159
EM: Round [209] log likelihood: -548904.530960
EM: Round [210] log likelihood: -548904.530764
EM: Round [211] log likelihood: -548904.530572
EM: Round [212] log likelihood: -548904.530383
EM: Round [213] log likelihood: -548904.530198
EM: Round [214] log likelihood: -548904.530017
EM: Round [215] log likelihood: -548904.529839
EM: Round [216] log likelihood: -548904.529664
EM: Round [217] log likelihood: -548904.529492
EM: Round [218] log likelihood: -548904.529324
EM: Round [219] log likelihood: -548904.529159
EM: Round [220] log likelihood: -548904.528997
EM: Round [221] log likelihood: -548904.528838
EM: Round [222] log likelihood: -548904.528682
EM: Round [223] log likelihood: -548904.528529
EM: Round [224] log likelihood: -548904.528379
EM: Round [225] log likelihood: -548904.528231
EM: Round [226] log likelihood: -548904.528087
EM: Round [227] log likelihood: -548904.527944
EM: Round [228] log likelihood: -548904.527805
EM: Round [229] log likelihood: -548904.527668
EM: Round [230] log likelihood: -548904.527533
EM: Round [231] log likelihood: -548904.527401
EM: Round [232] log likelihood: -548904.527272
EM: Round [233] log likelihood: -548904.527145
EM: Round [234] log likelihood: -548904.527020
EM: Round [235] log likelihood: -548904.526897
EM: Round [236] log likelihood: -548904.526777
EM: Round [237] log likelihood: -548904.526658
EM: Round [238] log likelihood: -548904.526542
EM: Round [239] log likelihood: -548904.526428
EM: Round [240] log likelihood: -548904.526316
EM: Round [241] log likelihood: -548904.526206
EM: Round [242] log likelihood: -548904.526098
EM: Round [243] log likelihood: -548904.525992
EM: Round [244] log likelihood: -548904.525887
EM: Round [245] log likelihood: -548904.525785
EM: Round [246] log likelihood: -548904.525684
EM: Round [247] log likelihood: -548904.525586
EM: Stopping iterations at round 247 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 79906347 > /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir > /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir --annotate /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir
-done, see /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 991, filtered: 8149)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000181577.16]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000260236.1]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000249175.1]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000246323.2]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000250251.6]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000271434.3]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000131484.4]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000238035.8]
WARNING, no entry stored in dbm for [ENSG00000226824.7]
WARNING, no entry stored in dbm for [ENSG00000278591.1]
WARNING, no entry stored in dbm for [ENSG00000175772.11]
WARNING, no entry stored in dbm for [ENSG00000275219.1]
WARNING, no entry stored in dbm for [ENSG00000175772.11]
WARNING, no entry stored in dbm for [ENSG00000274452.1]
WARNING, no entry stored in dbm for [ENSG00000175772.11]
WARNING, no entry stored in dbm for [ENSG00000274062.1]
WARNING, no entry stored in dbm for [ENSG00000175772.11]
WARNING, no entry stored in dbm for [ENSG00000274862.1]
WARNING, no entry stored in dbm for [ENSG00000175772.11]
WARNING, no entry stored in dbm for [ENSG00000278774.1]
WARNING, no entry stored in dbm for [ENSG00000175772.11]
WARNING, no entry stored in dbm for [ENSG00000277903.1]
WARNING, no entry stored in dbm for [ENSG00000175772.11]
WARNING, no entry stored in dbm for [ENSG00000276596.1]
WARNING, no entry stored in dbm for [ENSG00000175772.11]
WARNING, no entry stored in dbm for [ENSG00000278048.1]
WARNING, no entry stored in dbm for [ENSG00000175772.11]
WARNING, no entry stored in dbm for [ENSG00000274432.1]
WARNING, no entry stored in dbm for [ENSG00000175772.11]
WARNING, no entry stored in dbm for [ENSG00000273709.1]
WARNING, no entry stored in dbm for [ENSG00000175772.11]
WARNING, no entry stored in dbm for [ENSG00000275616.1]
WARNING, no entry stored in dbm for [ENSG00000175772.11]
WARNING, no entry stored in dbm for [ENSG00000223336.1]
WARNING, no entry stored in dbm for [ENSG00000175772.11]
WARNING, no entry stored in dbm for [ENSG00000223247.1]
WARNING, no entry stored in dbm for [ENSG00000175772.11]
WARNING, no entry stored in dbm for [ENSG00000230510.7]
WARNING, no entry stored in dbm for [ENSG00000230510.7]
WARNING, no entry stored in dbm for [ENSG00000278665.1]
WARNING, no entry stored in dbm for [ENSG00000225159.1]
WARNING, no entry stored in dbm for [ENSG00000259161.2]
WARNING, no entry stored in dbm for [ENSG00000229415.10]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [IGL-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000224086.6]
WARNING, no entry stored in dbm for [ENSG00000215283.3]
WARNING, no entry stored in dbm for [ENSG00000255391.1]
WARNING, no entry stored in dbm for [ENSG00000245060.8]
WARNING, no entry stored in dbm for [ENSG00000248079.3]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000257612.2]
WARNING, no entry stored in dbm for [ENSG00000260086.3]
WARNING, no entry stored in dbm for [ENSG00000217801.10]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000239268.3]
WARNING, no entry stored in dbm for [ENSG00000267506.5]
WARNING, no entry stored in dbm for [ENSG00000225840.2]
WARNING, no entry stored in dbm for [ENSG00000222043.2]
WARNING, no entry stored in dbm for [ENSG00000255644.1]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000234350.5]
WARNING, no entry stored in dbm for [ENSG00000279217.1]
WARNING, no entry stored in dbm for [ENSG00000251705.1]
WARNING, no entry stored in dbm for [ENSG00000241743.4]
WARNING, no entry stored in dbm for [ENSG00000233559.2]
WARNING, no entry stored in dbm for [ENSG00000225292.2]
WARNING, no entry stored in dbm for [ENSG00000273270.1]
WARNING, no entry stored in dbm for [ENSG00000285564.2]
WARNING, no entry stored in dbm for [ENSG00000235890.2]
WARNING, no entry stored in dbm for [ENSG00000230572.5]
WARNING, no entry stored in dbm for [ENSG00000201098.1]
WARNING, no entry stored in dbm for [ENSG00000202380.1]
WARNING, no entry stored in dbm for [ENSG00000271739.1]
WARNING, no entry stored in dbm for [ENSG00000253089.1]
WARNING, no entry stored in dbm for [ENSG00000259867.6]
WARNING, no entry stored in dbm for [ENSG00000248736.3]
WARNING, no entry stored in dbm for [ENSG00000267055.1]
WARNING, no entry stored in dbm for [ENSG00000226823.1]
WARNING, no entry stored in dbm for [ENSG00000261713.6]
WARNING, no entry stored in dbm for [ENSG00000213442.5]
WARNING, no entry stored in dbm for [ENSG00000248980.1]
WARNING, no entry stored in dbm for [ENSG00000269893.8]
WARNING, no entry stored in dbm for [ENSG00000255717.7]
WARNING, no entry stored in dbm for [ENSG00000255717.7]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000254042.2]
WARNING, no entry stored in dbm for [ENSG00000237949.2]
WARNING, no entry stored in dbm for [ENSG00000215424.10]
WARNING, no entry stored in dbm for [ENSG00000264672.6]
WARNING, no entry stored in dbm for [ENSG00000262898.3]
WARNING, no entry stored in dbm for [ENSG00000253541.1]
WARNING, no entry stored in dbm for [ENSG00000258526.7]
WARNING, no entry stored in dbm for [ENSG00000224897.8]
WARNING, no entry stored in dbm for [ENSG00000267586.7]
WARNING, no entry stored in dbm for [ENSG00000219747.1]
WARNING, no entry stored in dbm for [ENSG00000224796.1]
WARNING, no entry stored in dbm for [ENSG00000257074.3]
WARNING, no entry stored in dbm for [ENSG00000241030.1]
WARNING, no entry stored in dbm for [ENSG00000274210.1]
WARNING, no entry stored in dbm for [ENSG00000215386.13]
WARNING, no entry stored in dbm for [ENSG00000248634.1]
WARNING, no entry stored in dbm for [ENSG00000201059.1]
WARNING, no entry stored in dbm for [ENSG00000212454.1]
WARNING, no entry stored in dbm for [ENSG00000202263.1]
WARNING, no entry stored in dbm for [ENSG00000243352.3]
WARNING, no entry stored in dbm for [ENSG00000243374.3]
WARNING, no entry stored in dbm for [ENSG00000275132.1]
WARNING, no entry stored in dbm for [ENSG00000239466.3]
WARNING, no entry stored in dbm for [ENSG00000200783.1]
WARNING, no entry stored in dbm for [ENSG00000235043.3]
WARNING, no entry stored in dbm for [ENSG00000251185.1]
WARNING, no entry stored in dbm for [ENSG00000260898.6]
WARNING, no entry stored in dbm for [ENSG00000200028.1]
WARNING, no entry stored in dbm for [ENSG00000212396.1]
WARNING, no entry stored in dbm for [ENSG00000239184.1]
WARNING, no entry stored in dbm for [ENSG00000267433.1]
WARNING, no entry stored in dbm for [ENSG00000229419.1]
WARNING, no entry stored in dbm for [ENSG00000196204.12]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000280159.1]
WARNING, no entry stored in dbm for [ENSG00000261348.2]
WARNING, no entry stored in dbm for [ENSG00000232973.13]
WARNING, no entry stored in dbm for [ENSG00000200156.1]
WARNING, no entry stored in dbm for [ENSG00000200972.1]
WARNING, no entry stored in dbm for [ENSG00000199568.1]
WARNING, no entry stored in dbm for [ENSG00000273125.2]
WARNING, no entry stored in dbm for [ENSG00000257557.2]
WARNING, no entry stored in dbm for [ENSG00000286989.1]
WARNING, no entry stored in dbm for [ENSG00000231123.1]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000266325.1]
WARNING, no entry stored in dbm for [ENSG00000253341.1]
WARNING, no entry stored in dbm for [ENSG00000229539.1]
WARNING, no entry stored in dbm for [ENSG00000214487.3]
WARNING, no entry stored in dbm for [ENSG00000259952.1]
WARNING, no entry stored in dbm for [ENSG00000270012.1]
WARNING, no entry stored in dbm for [ENSG00000250579.2]
WARNING, no entry stored in dbm for [ENSG00000249541.1]
WARNING, no entry stored in dbm for [ENSG00000283426.1]
WARNING, no entry stored in dbm for [ENSG00000237973.1]
WARNING, no entry stored in dbm for [ENSG00000261556.10]
WARNING, no entry stored in dbm for [ENSG00000224776.3]
WARNING, no entry stored in dbm for [ENSG00000234337.4]
WARNING, no entry stored in dbm for [ENSG00000284448.1]
WARNING, no entry stored in dbm for [ENSG00000275334.1]
WARNING, no entry stored in dbm for [ENSG00000266192.3]
WARNING, no entry stored in dbm for [ENSG00000248117.1]
WARNING, no entry stored in dbm for [ENSG00000280414.1]
WARNING, no entry stored in dbm for [ENSG00000246331.2]
WARNING, no entry stored in dbm for [ENSG00000248309.7]
WARNING, no entry stored in dbm for [ENSG00000238013.1]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000232527.8]
WARNING, no entry stored in dbm for [ENSG00000272779.1]
WARNING, no entry stored in dbm for [ENSG00000235645.2]
WARNING, no entry stored in dbm for [ENSG00000254689.3]
WARNING, no entry stored in dbm for [ENSG00000225872.4]
WARNING, no entry stored in dbm for [ENSG00000224017.2]
WARNING, no entry stored in dbm for [ENSG00000248131.6]
WARNING, no entry stored in dbm for [ENSG00000222005.9]
WARNING, no entry stored in dbm for [ENSG00000238266.2]
WARNING, no entry stored in dbm for [ENSG00000179136.7]
WARNING, no entry stored in dbm for [ENSG00000253394.6]
WARNING, no entry stored in dbm for [ENSG00000249743.6]
WARNING, no entry stored in dbm for [ENSG00000226696.6]
WARNING, no entry stored in dbm for [ENSG00000286042.1]
WARNING, no entry stored in dbm for [ENSG00000233930.4]
WARNING, no entry stored in dbm for [ENSG00000286948.1]
WARNING, no entry stored in dbm for [ENSG00000253218.1]
WARNING, no entry stored in dbm for [ENSG00000226419.8]
WARNING, no entry stored in dbm for [ENSG00000233308.2]
WARNING, no entry stored in dbm for [ENSG00000284543.1]
WARNING, no entry stored in dbm for [ENSG00000272109.2]
WARNING, no entry stored in dbm for [ENSG00000251432.7]
WARNING, no entry stored in dbm for [ENSG00000259673.6]
WARNING, no entry stored in dbm for [ENSG00000224668.1]
WARNING, no entry stored in dbm for [ENSG00000264578.1]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000271418.1]
WARNING, no entry stored in dbm for [ENSG00000278665.1]
WARNING, no entry stored in dbm for [ENSG00000238013.1]
WARNING, no entry stored in dbm for [ENSG00000250494.1]
WARNING, no entry stored in dbm for [ENSG00000249031.1]
WARNING, no entry stored in dbm for [ENSG00000161912.18]
WARNING, no entry stored in dbm for [ENSG00000232829.3]
WARNING, no entry stored in dbm for [ENSG00000249353.2]
WARNING, no entry stored in dbm for [ENSG00000262533.1]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000214433.4]
WARNING, no entry stored in dbm for [ENSG00000230189.7]
WARNING, no entry stored in dbm for [ENSG00000268388.6]
WARNING, no entry stored in dbm for [ENSG00000257252.6]
WARNING, no entry stored in dbm for [ENSG00000233695.2]
WARNING, no entry stored in dbm for [ENSG00000256195.3]
WARNING, no entry stored in dbm for [ENSG00000281896.1]
WARNING, no entry stored in dbm for [ENSG00000233708.1]
WARNING, no entry stored in dbm for [ENSG00000215498.9]
WARNING, no entry stored in dbm for [ENSG00000237773.7]
WARNING, no entry stored in dbm for [ENSG00000267083.1]
WARNING, no entry stored in dbm for [ENSG00000278733.1]
WARNING, no entry stored in dbm for [ENSG00000240401.9]
WARNING, no entry stored in dbm for [ENSG00000226017.2]
WARNING, no entry stored in dbm for [ENSG00000237549.1]
WARNING, no entry stored in dbm for [ENSG00000234312.1]
WARNING, no entry stored in dbm for [ENSG00000228887.3]
WARNING, no entry stored in dbm for [ENSG00000229280.1]
WARNING, no entry stored in dbm for [ENSG00000179818.14]
WARNING, no entry stored in dbm for [ENSG00000266014.2]
WARNING, no entry stored in dbm for [ENSG00000249835.2]
WARNING, no entry stored in dbm for [ENSG00000254275.6]
WARNING, no entry stored in dbm for [ENSG00000262488.1]
WARNING, no entry stored in dbm for [ENSG00000288638.1]
WARNING, no entry stored in dbm for [ENSG00000226950.8]
WARNING, no entry stored in dbm for [ENSG00000229754.1]
WARNING, no entry stored in dbm for [ENSG00000275014.1]
WARNING, no entry stored in dbm for [ENSG00000259020.3]
WARNING, no entry stored in dbm for [ENSG00000250391.1]
WARNING, no entry stored in dbm for [ENSG00000285427.1]
WARNING, no entry stored in dbm for [ENSG00000168405.17]
WARNING, no entry stored in dbm for [ENSG00000243830.2]
WARNING, no entry stored in dbm for [ENSG00000251504.1]
WARNING, no entry stored in dbm for [ENSG00000263551.6]
WARNING, no entry stored in dbm for [ENSG00000250979.1]
WARNING, no entry stored in dbm for [ENSG00000286277.1]
WARNING, no entry stored in dbm for [ENSG00000273328.5]
WARNING, no entry stored in dbm for [ENSG00000236830.7]
WARNING, no entry stored in dbm for [ENSG00000272150.5]
WARNING, no entry stored in dbm for [ENSG00000288596.2]
WARNING, no entry stored in dbm for [ENSG00000261659.2]
WARNING, no entry stored in dbm for [ENSG00000224750.6]
WARNING, no entry stored in dbm for [ENSG00000230131.6]
WARNING, no entry stored in dbm for [ENSG00000255568.3]
WARNING, no entry stored in dbm for [ENSG00000198358.4]
WARNING, no entry stored in dbm for [ENSG00000213468.7]
WARNING, no entry stored in dbm for [ENSG00000224596.8]
WARNING, no entry stored in dbm for [ENSG00000231188.1]
WARNING, no entry stored in dbm for [ENSG00000243069.8]
WARNING, no entry stored in dbm for [ENSG00000256902.1]
WARNING, no entry stored in dbm for [ENSG00000266522.1]
WARNING, no entry stored in dbm for [ENSG00000224905.7]
WARNING, no entry stored in dbm for [ENSG00000187172.15]
WARNING, no entry stored in dbm for [ENSG00000248736.3]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000266931.2]
WARNING, no entry stored in dbm for [ENSG00000237094.12]
WARNING, no entry stored in dbm for [ENSG00000273599.1]
WARNING, no entry stored in dbm for [ENSG00000230021.10]
WARNING, no entry stored in dbm for [ENSG00000230021.10]
WARNING, no entry stored in dbm for [ENSG00000241860.7]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000282772.1]
WARNING, no entry stored in dbm for [ENSG00000280113.2]
WARNING, no entry stored in dbm for [ENSG00000259723.1]
WARNING, no entry stored in dbm for [ENSG00000250979.1]
WARNING, no entry stored in dbm for [ENSG00000278390.5]
WARNING, no entry stored in dbm for [ENSG00000286842.1]
WARNING, no entry stored in dbm for [ENSG00000272906.1]
WARNING, no entry stored in dbm for [ENSG00000287330.1]
WARNING, no entry stored in dbm for [ENSG00000216360.1]
WARNING, no entry stored in dbm for [ENSG00000287913.1]
WARNING, no entry stored in dbm for [ENSG00000213598.4]
WARNING, no entry stored in dbm for [ENSG00000288543.1]
WARNING, no entry stored in dbm for [ENSG00000268257.2]
WARNING, no entry stored in dbm for [ENSG00000265018.6]
WARNING, no entry stored in dbm for [ENSG00000205791.3]
WARNING, no entry stored in dbm for [ENSG00000230869.1]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000261273.1]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000214135.8]
WARNING, no entry stored in dbm for [ENSG00000235126.1]
WARNING, no entry stored in dbm for [ENSG00000284610.1]
WARNING, no entry stored in dbm for [ENSG00000250159.7]
WARNING, no entry stored in dbm for [ENSG00000259692.6]
WARNING, no entry stored in dbm for [ENSG00000250979.1]
WARNING, no entry stored in dbm for [ENSG00000259692.6]
WARNING, no entry stored in dbm for [ENSG00000250979.1]
WARNING, no entry stored in dbm for [ENSG00000241593.5]
WARNING, no entry stored in dbm for [ENSG00000249675.1]
WARNING, no entry stored in dbm for [ENSG00000251378.1]
WARNING, no entry stored in dbm for [ENSG00000287883.1]
WARNING, no entry stored in dbm for [ENSG00000266208.1]
WARNING, no entry stored in dbm for [ENSG00000284669.1]
WARNING, no entry stored in dbm for [ENSG00000234686.1]
WARNING, no entry stored in dbm for [ENSG00000264151.6]
WARNING, no entry stored in dbm for [ENSG00000280828.1]
WARNING, no entry stored in dbm for [ENSG00000286380.1]
WARNING, no entry stored in dbm for [ENSG00000268120.1]
WARNING, no entry stored in dbm for [ENSG00000286380.1]
WARNING, no entry stored in dbm for [ENSG00000268120.1]
WARNING, no entry stored in dbm for [ENSG00000274565.1]
WARNING, no entry stored in dbm for [ENSG00000249258.2]
WARNING, no entry stored in dbm for [ENSG00000249142.1]
WARNING, no entry stored in dbm for [ENSG00000274124.1]
WARNING, no entry stored in dbm for [ENSG00000251313.1]
WARNING, no entry stored in dbm for [ENSG00000250938.6]
WARNING, no entry stored in dbm for [ENSG00000254859.1]
WARNING, no entry stored in dbm for [ENSG00000280331.1]
WARNING, no entry stored in dbm for [ENSG00000251066.1]
WARNING, no entry stored in dbm for [ENSG00000258916.2]
WARNING, no entry stored in dbm for [ENSG00000251066.1]
WARNING, no entry stored in dbm for [ENSG00000251066.1]
WARNING, no entry stored in dbm for [ENSG00000251066.1]
WARNING, no entry stored in dbm for [ENSG00000251066.1]
WARNING, no entry stored in dbm for [ENSG00000248755.1]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [ENSG00000274021.1]
WARNING, no entry stored in dbm for [ENSG00000224722.3]
WARNING, no entry stored in dbm for [ENSG00000213963.6]
WARNING, no entry stored in dbm for [ENSG00000227544.10]
WARNING, no entry stored in dbm for [ENSG00000261329.6]
WARNING, no entry stored in dbm for [ENSG00000257696.1]
WARNING, no entry stored in dbm for [ENSG00000256615.1]
WARNING, no entry stored in dbm for [ENSG00000286247.1]
WARNING, no entry stored in dbm for [ENSG00000284671.1]
WARNING, no entry stored in dbm for [ENSG00000257022.1]
WARNING, no entry stored in dbm for [ENSG00000270453.1]
WARNING, no entry stored in dbm for [ENSG00000233891.8]
WARNING, no entry stored in dbm for [ENSG00000283132.1]
WARNING, no entry stored in dbm for [ENSG00000286376.1]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000229180.7]
WARNING, no entry stored in dbm for [ENSG00000226824.7]
WARNING, no entry stored in dbm for [ENSG00000266869.2]
WARNING, no entry stored in dbm for [ENSG00000250979.1]
WARNING, no entry stored in dbm for [ENSG00000267623.3]
WARNING, no entry stored in dbm for [ENSG00000228434.1]
WARNING, no entry stored in dbm for [ENSG00000254610.3]
WARNING, no entry stored in dbm for [ENSG00000241278.1]
WARNING, no entry stored in dbm for [ENSG00000228204.2]
WARNING, no entry stored in dbm for [ENSG00000280177.1]
WARNING, no entry stored in dbm for [ENSG00000268812.3]
WARNING, no entry stored in dbm for [ENSG00000251595.7]
WARNING, no entry stored in dbm for [ENSG00000235823.3]
WARNING, no entry stored in dbm for [ENSG00000253507.5]
WARNING, no entry stored in dbm for [ENSG00000254297.1]


	* STAR-Fusion complete.  See output: /tmp/nxf.3bujw4M4f8/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)