Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bd/a0e9334e0ce16663ee4326c61349d6/1173_LAF_T1_RNA_SLD_01_A23T55JLT4_2_1.fastp.fastq.gz Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/starfusion/ctat_genome_lib_build_dir Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/24a23b3299ce12a352628c433865f4/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/24a23b3299ce12a352628c433865f4/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bd/a0e9334e0ce16663ee4326c61349d6/1173_LAF_T1_RNA_SLD_01_A23T55JLT4_2_2.fastp.fastq.gz Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/55/7c1a7ae5483b4f04015da13ade979d/1173_LAF_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction ==> STAGING COMPLETE (6 inputs) -ctat genome lib [/tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.3bujw4M4f8/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary -sample contains 79906347 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir -J /tmp/nxf.3bujw4M4f8/1173_LAF_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction -O /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.3bujw4M4f8/1173_LAF_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction -building interval tree based on /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=150000.00/min [20000], rate=133333.33/min [30000], rate=138461.54/min [40000], rate=141176.47/min [50000], rate=142857.14/min [60000], rate=138461.54/min [70000], rate=135483.87/min [80000], rate=137142.86/min [90000], rate=138461.54/min [100000], rate=139534.88/min [110000], rate=134693.88/min [120000], rate=133333.33/min [130000], rate=134482.76/min [140000], rate=135483.87/min [150000], rate=132352.94/min [160000], rate=124675.32/min [170000], rate=115909.09/min [180000], rate=108000.00/min [190000], rate=104587.16/min [200000], rate=99173.55/min [210000], rate=96923.08/min [220000], rate=95652.17/min [230000], rate=94520.55/min [240000], rate=92903.23/min [250000], rate=89820.36/min [260000], rate=87640.45/min [270000], rate=89502.76/min [280000], rate=87500.00/min [290000], rate=87878.79/min [300000], rate=84507.04/min [310000], rate=84931.51/min [320000], rate=83478.26/min [330000], rate=82845.19/min [340000], rate=83950.62/min [350000], rate=84677.42/min [360000], rate=84046.69/min [370000], rate=86046.51/min [380000], rate=85714.29/min [390000], rate=85714.29/min [400000], rate=86956.52/min [410000], rate=89130.43/min [420000], rate=90974.73/min [430000], rate=92142.86/min [440000], rate=93617.02/min [450000], rate=95406.36/min [460000], rate=96842.11/min [470000], rate=98601.40/min [480000], rate=100000.00/min [490000], rate=101379.31/min [500000], rate=103448.28/min [510000], rate=104794.52/min [520000], rate=106484.64/min [530000], rate=108163.27/min [540000], rate=109459.46/min [550000], rate=111111.11/min [560000], rate=112751.68/min [570000], rate=112500.00/min [580000], rate=113355.05/min [590000], rate=113099.04/min [600000], rate=113924.05/min [610000], rate=115822.78/min [620000], rate=117350.16/min [630000], rate=117391.30/min [640000], rate=116717.33/min [650000], rate=116071.43/min [660000], rate=116814.16/min [670000], rate=118584.07/min [680000], rate=120353.98/min [690000], rate=122123.89/min [700000], rate=123529.41/min [710000], rate=125294.12/min [720000], rate=124855.49/min [730000], rate=125142.86/min [740000], rate=122314.05/min [750000], rate=121951.22/min [760000], rate=122252.01/min [770000], rate=120942.41/min [780000], rate=120930.23/min [790000], rate=121227.62/min [800000], rate=120906.80/min [810000], rate=120595.53/min [820000], rate=120588.24/min [830000], rate=120581.11/min [840000], rate=120574.16/min [850000], rate=120567.38/min [860000], rate=121126.76/min [870000], rate=121113.69/min [880000], rate=121658.99/min [890000], rate=121640.09/min [900000], rate=121896.16/min [910000], rate=121875.00/min [920000], rate=121854.30/min [930000], rate=121834.06/min [940000], rate=122342.73/min [950000], rate=123110.15/min [960000], rate=123340.47/min [970000], rate=123829.79/min [980000], rate=124312.90/min [990000], rate=125052.63/min [1000000], rate=125523.01/min [1010000], rate=125987.53/min [1020000], rate=126185.57/min [1030000], rate=126380.37/min [1040000], rate=126315.79/min [1050000], rate=126506.02/min [1060000], rate=126190.48/min [1070000], rate=125636.01/min [1080000], rate=126070.04/min [1090000], rate=126254.83/min [1100000], rate=126923.08/min [1110000], rate=127099.24/min [1120000], rate=127272.73/min [1130000], rate=127443.61/min [1140000], rate=127850.47/min [1150000], rate=128731.34/min [1160000], rate=128413.28/min [1170000], rate=128102.19/min [1180000], rate=127797.83/min [1190000], rate=128186.71/min [1200000], rate=128571.43/min [1210000], rate=129411.76/min [1220000], rate=130249.11/min [1230000], rate=131083.48/min [1240000], rate=131914.89/min [1250000], rate=132743.36/min [1260000], rate=133568.90/min [1270000], rate=134391.53/min [1280000], rate=135449.74/min [1290000], rate=136507.94/min [1300000], rate=137323.94/min [1310000], rate=138137.08/min [1320000], rate=138704.03/min [1330000], rate=139754.82/min [1340000], rate=140805.60/min [1350000], rate=141856.39/min [1360000], rate=142657.34/min [1370000], rate=143706.29/min [1380000], rate=144755.24/min [1390000], rate=145804.20/min [1400000], rate=146853.15/min [1410000], rate=147902.10/min [1420000], rate=148691.10/min [1430000], rate=149738.22/min [1440000], rate=150785.34/min [1450000], rate=151832.46/min [1460000], rate=152879.58/min [1470000], rate=153926.70/min [1480000], rate=154973.82/min [1490000], rate=156020.94/min [1500000], rate=157068.06/min [1510000], rate=157839.72/min [1520000], rate=158885.02/min [1530000], rate=159930.31/min [1540000], rate=160975.61/min [1550000], rate=162020.91/min [1560000], rate=163066.20/min [1570000], rate=164111.50/min [1580000], rate=165156.79/min [1590000], rate=165913.04/min [1600000], rate=166089.97/min [1610000], rate=165694.68/min [1620000], rate=164745.76/min [1630000], rate=164093.96/min [1640000], rate=163727.12/min [1650000], rate=163907.28/min [1660000], rate=164085.67/min [1670000], rate=163725.49/min [1680000], rate=163106.80/min [1690000], rate=162760.83/min [1700000], rate=162420.38/min [1710000], rate=162599.05/min [1720000], rate=162519.69/min [1730000], rate=162187.50/min [1740000], rate=161860.47/min [1750000], rate=161787.37/min [1760000], rate=161715.16/min [1770000], rate=161153.26/min [1780000], rate=160843.37/min [1790000], rate=160538.12/min [1800000], rate=160714.29/min [1810000], rate=160176.99/min [1820000], rate=159183.67/min [1830000], rate=158213.26/min [1840000], rate=156818.18/min [1850000], rate=155680.22/min [1860000], rate=154143.65/min [1870000], rate=153069.58/min [1880000], rate=152226.72/min [1890000], rate=151200.00/min [1900000], rate=150197.63/min [1910000], rate=149024.71/min [1920000], rate=147881.90/min [1930000], rate=147892.72/min [1940000], rate=146599.50/min [1950000], rate=146067.42/min [1960000], rate=145006.17/min [1970000], rate=144322.34/min [1980000], rate=143132.53/min [1990000], rate=142822.97/min [2000000], rate=142857.14/min [2010000], rate=142553.19/min [2020000], rate=142253.52/min [2030000], rate=142622.95/min [2040000], rate=142325.58/min [2050000], rate=141868.51/min [2060000], rate=142396.31/min [2070000], rate=142922.90/min [2080000], rate=143613.35/min [2090000], rate=143478.26/min [2100000], rate=144000.00/min [2110000], rate=144520.55/min [2120000], rate=145039.91/min [2130000], rate=145392.49/min [2140000], rate=145909.09/min [2150000], rate=146424.52/min [2160000], rate=146772.37/min [2170000], rate=147285.07/min [2180000], rate=147963.80/min [2190000], rate=148474.58/min [2200000], rate=148648.65/min [2210000], rate=149156.36/min [2220000], rate=149160.13/min [2230000], rate=149330.36/min [2240000], rate=149499.44/min [2250000], rate=148842.34/min [2260000], rate=149503.86/min [2270000], rate=150165.38/min [2280000], rate=150660.79/min [2290000], rate=150163.93/min [2300000], rate=149674.62/min [2310000], rate=149032.26/min [2320000], rate=149516.65/min [2330000], rate=150161.12/min [2340000], rate=150805.59/min [2350000], rate=151450.05/min [2360000], rate=151931.33/min [2370000], rate=152575.11/min [2380000], rate=152401.28/min [2390000], rate=152067.87/min [2400000], rate=150943.40/min [2410000], rate=151097.18/min [2420000], rate=151407.72/min [2430000], rate=151716.96/min [2440000], rate=151396.07/min [2450000], rate=150924.02/min [2460000], rate=151074.72/min [2470000], rate=150916.50/min [2480000], rate=150607.29/min [2490000], rate=150604.84/min [2500000], rate=150753.77/min [2510000], rate=150449.55/min [2520000], rate=150447.76/min [2530000], rate=150595.24/min [2540000], rate=150592.89/min [2550000], rate=150738.92/min [2560000], rate=151032.45/min [2570000], rate=150880.63/min [2580000], rate=150877.19/min [2590000], rate=150727.45/min [2600000], rate=150579.15/min [2610000], rate=150432.28/min [2620000], rate=150719.08/min [2630000], rate=150716.33/min [2640-building interval tree based on /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.12 min). -mapping reads to genes [10000], rate=150000.00/min [20000], rate=109090.91/min [30000], rate=120000.00/min [40000], rate=114285.71/min [50000], rate=107142.86/min [60000], rate=109090.91/min [70000], rate=107692.31/min [80000], rate=111627.91/min [90000], rate=114893.62/min [100000], rate=115384.62/min [110000], rate=115789.47/min [120000], rate=120000.00/min [130000], rate=123809.52/min [140000], rate=125373.13/min [150000], rate=123287.67/min [160000], rate=115662.65/min [170000], rate=117241.38/min [180000], rate=118681.32/min [190000], rate=118750.00/min [200000], rate=122448.98/min [210000], rate=126000.00/min [220000], rate=129411.76/min [230000], rate=133980.58/min [240000], rate=137142.86/min [250000], rate=140186.92/min [260000], rate=144444.44/min [270000], rate=148623.85/min [280000], rate=152727.27/min [290000], rate=155357.14/min [300000], rate=159292.04/min [310000], rate=163157.89/min [320000], rate=166956.52/min [330000], rate=170689.66/min [340000], rate=174358.97/min [350000], rate=177966.10/min [360000], rate=180000.00/min [370000], rate=183471.07/min [380000], rate=186885.25/min [390000], rate=190243.90/min [400000], rate=193548.39/min [410000], rate=196800.00/min [420000], rate=200000.00/min [430000], rate=203149.61/min [440000], rate=206250.00/min [450000], rate=206106.87/min [460000], rate=209090.91/min [470000], rate=212030.08/min [480000], rate=216541.35/min [490000], rate=219402.99/min [500000], rate=222222.22/min [510000], rate=226666.67/min [520000], rate=229411.76/min [530000], rate=232116.79/min [540000], rate=236496.35/min [550000], rate=239130.43/min [560000], rate=241726.62/min [570000], rate=246043.17/min [580000], rate=248571.43/min [590000], rate=251063.83/min [600000], rate=255319.15/min [610000], rate=257746.48/min [620000], rate=260139.86/min [630000], rate=262500.00/min [640000], rate=266666.67/min [650000], rate=268965.52/min [660000], rate=271232.88/min [670000], rate=275342.47/min [680000], rate=277551.02/min [690000], rate=279729.73/min [700000], rate=283783.78/min [710000], rate=285906.04/min [720000], rate=288000.00/min [730000], rate=286274.51/min [740000], rate=279245.28/min [750000], rate=269461.08/min [760000], rate=257627.12/min [770000], rate=252459.02/min [780000], rate=250267.38/min [790000], rate=248167.54/min [800000], rate=243654.82/min [810000], rate=238235.29/min [820000], rate=234285.71/min [830000], rate=231627.91/min [840000], rate=228054.30/min [850000], rate=225663.72/min [860000], rate=221459.23/min [870000], rate=217500.00/min [880000], rate=215510.20/min [890000], rate=213600.00/min [900000], rate=210116.73/min [910000], rate=207604.56/min [920000], rate=205970.15/min [930000], rate=204395.60/min [940000], rate=200711.74/min [950000], rate=195205.48/min [960000], rate=189473.68/min [970000], rate=183596.21/min [980000], rate=180923.08/min [990000], rate=176261.13/min [1000000], rate=171919.77/min [1010000], rate=168802.23/min [1020000], rate=165405.41/min [1030000], rate=162204.72/min [1040000], rate=158778.63/min [1050000], rate=154791.15/min [1060000], rate=153995.16/min [1070000], rate=150704.23/min [1080000], rate=149653.58/min [1090000], rate=146966.29/min [1100000], rate=145695.36/min [1110000], rate=142004.26/min [1120000], rate=139708.94/min [1130000], rate=140082.64/min [1140000], rate=139024.39/min [1150000], rate=137176.94/min [1160000], rate=137549.41/min [1170000], rate=136575.88/min [1180000], rate=134857.14/min [1190000], rate=134971.64/min [1200000], rate=135593.22/min [1210000], rate=136466.17/min [1220000], rate=136567.16/min [1230000], rate=136666.67/min [1240000], rate=137523.11/min [1250000], rate=137867.65/min [1260000], rate=138461.54/min [1270000], rate=138797.81/min [1280000], rate=139130.43/min [1290000], rate=139963.83/min [1300000], rate=140287.77/min [1310000], rate=140860.22/min [1320000], rate=141428.57/min [1330000], rate=141238.94/min [1340000], rate=142049.47/min [1350000], rate=142605.63/min [1360000], rate=141421.14/min [1370000], rate=141724.14/min [1380000], rate=141056.22/min [1390000], rate=141355.93/min [1400000], rate=142131.98/min [1410000], rate=142905.41/min [1420000], rate=142237.06/min [1430000], rate=140886.70/min [1440000], rate=139579.97/min [1450000], rate=139871.38/min [1460000], rate=140609.95/min [1470000], rate=141573.03/min [1480000], rate=142307.69/min [1490000], rate=143040.00/min [1500000], rate=143540.67/min [1510000], rate=143127.96/min [1520000], rate=142723.00/min [1530000], rate=140797.55/min [1540000], rate=140639.27/min [1550000], rate=140695.92/min [1560000], rate=141176.47/min [1570000], rate=140387.48/min [1580000], rate=139617.08/min [1590000], rate=139473.68/min [1600000], rate=138929.09/min [1610000], rate=138197.42/min [1620000], rate=137677.05/min [1630000], rate=137552.74/min [1640000], rate=137238.49/min [1650000], rate=136740.33/min [1660000], rate=136625.51/min [1670000], rate=136141.30/min [1680000], rate=136216.22/min [1690000], rate=136290.32/min [1700000], rate=135818.91/min [1710000], rate=135714.29/min [1720000], rate=135433.07/min [1730000], rate=135332.46/min [1740000], rate=135233.16/min [1750000], rate=135309.28/min [1760000], rate=135211.27/min [1770000], rate=135459.18/min [1780000], rate=135705.21/min [1790000], rate=135949.37/min [1800000], rate=136191.68/min [1810000], rate=136432.16/min [1820000], rate=136329.59/min [1830000], rate=136228.29/min [1840000], rate=136128.24/min [1850000], rate=136363.64/min [1860000], rate=136263.74/min [1870000], rate=135835.35/min [1880000], rate=135903.61/min [1890000], rate=135971.22/min [1900000], rate=136200.72/min [1910000], rate=136104.51/min [1920000], rate=136009.45/min [1930000], rate=135915.49/min [1940000], rate=136140.35/min [1950000], rate=136522.75/min [1960000], rate=136903.38/min [1970000], rate=137441.86/min [1980000], rate=137979.09/min [1990000], rate=138194.44/min [2000000], rate=138728.32/min [2010000], rate=139260.97/min [2020000], rate=139792.39/min [2030000], rate=140322.58/min [2040000], rate=140689.66/min [2050000], rate=140893.47/min [2060000], rate=140295.12/min [2070000], rate=139864.86/min [2080000], rate=139597.32/min [2090000], rate=139643.65/min [2100000], rate=139689.58/min [2110000], rate=139581.04/min [2120000], rate=139473.68/min [2130000], rate=139519.65/min [2140000], rate=139413.68/min [2150000], rate=139459.46/min [2160000], rate=139655.17/min [2170000], rate=139699.57/min [2180000], rate=139893.05/min [2190000], rate=140085.29/min [2200000], rate=139387.54/min [2210000], rate=138993.71/min [2220000], rate=138605.62/min [2230000], rate=138223.14/min [2240000], rate=137704.92/min [2250000], rate=137334.69/min [2260000], rate=136969.70/min [2270000], rate=136609.83/min [2280000], rate=136526.95/min [2290000], rate=136444.89/min [2300000], rate=136229.02/min [2310000], rate=136149.31/min [2320000], rate=136203.52/min [2330000], rate=136390.24/min [2340000], rate=136443.15/min [2350000], rate=136363.64/min [2360000], rate=135502.39/min [2370000], rate=134277.62/min [2380000], rate=133208.96/min [2390000], rate=132044.20/min [2400000], rate=131028.21/min [2410000], rate=130387.74/min [2420000], rate=129642.86/min [2430000], rate=128912.47/min [2440000], 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rate=102830.67/min [3340000], rate=102821.96/min [3350000], rate=102760.74/min [3360000], rate=102752.29/min [3370000], rate=102796.14/min [3380000], rate=102891.93/min [3390000], rate=102987.34/min [3400000], rate=103030.30/min [3410000], rate=103125.00/min [3420000], rate=103271.26/min [3430000], rate=103365.14/min [3440000], rate=103458.65/min [3450000], rate=103603.60/min [3460000], rate=103748.13/min [3470000], rate=103892.22/min [3480000], rate=103932.30/min [3490000], rate=103972.19/min [3500000], rate=104063.43/min [3510000], rate=104154.30/min [3520000], rate=104399.41/min [3530000], rate=104644.27/min [3540000], rate=104940.71/min [3550000], rate=105081.40/min [3560000], rate=105169.87/min [3570000], rate=105309.73/min [3580000], rate=105449.19/min [3590000], rate=105640.02/min [3600000], rate=105623.47/min [3610000], rate=105504.14/min [3620000], rate=105283.57/min [3630000], rate=105217.39/min [3640000], rate=105151.66/min [3650000], rate=105288.46/min [3660000], rate=105475.50/min [3670000], rate=105510.30/min [3680000], rate=105494.51/min [3690000], rate=105478.80/min [3700000], rate=105463.18/min [3710000], rate=105447.66/min [3720000], rate=105482.04/min [3730000], rate=105516.27/min [3740000], rate=105550.33/min [3750000], rate=105633.80/min [3760000], rate=105716.96/min [3770000], rate=105799.81/min [3780000], rate=105931.81/min [3790000], rate=106063.43/min [3800000], rate=106194.69/min [3810000], rate=106325.58/min [3820000], rate=106258.69/min [3830000], rate=106094.18/min [3840000], rate=105979.76/min [3850000], rate=105866.18/min [3860000], rate=105801.74/min [3870000], rate=105737.70/min [3880000], rate=105674.08/min [3890000], rate=105610.86/min [3900000], rate=105691.06/min [3910000], rate=105723.30/min [3920000], rate=105707.87/min [3930000], rate=105645.16/min [3940000], rate=105724.51/min [3950000], rate=105803.57/min [3960000], rate=105835.19/min [3970000], rate=105913.74/min [3980000], rate=105944.99/min [3990000], rate=105788.78/min [4000000], rate=105633.80/min [4010000], rate=105572.62/min [4020000], rate=105604.20/min [4030000], rate=105451.37/min [4040000], rate=105299.74/min [4050000], rate=105149.29/min [4060000], rate=105045.28/min [4070000], rate=105122.69/min [4080000], rate=105199.83/min [4090000], rate=105186.46/min [4100000], rate=104993.60/min [4110000], rate=104891.54/min [4120000], rate=104790.17/min [4130000], rate=104645.27/min [4140000], rate=104589.47/min [4150000], rate=104446.31/min [4160000], rate=104347.83/min [4170000], rate=104293.46/min [4180000], rate=104282.74/min [4190000], rate=104228.86/min [4200000], rate=104175.28/min [4210000], rate=104122.01/min [4220000], rate=104111.84/min [4230000], rate=104101.72/min [4240000], rate=104134.26/min [4250000], rate=104166.67/min [4260000], rate=104198.94/min [4270000], rate=104231.08/min [4280000], rate=104220.78/min [4290000], rate=104294.98/min [4300000], rate=104368.93/min [4310000], rate=104358.35/min [4320000], rate=104431.91/min [4330000], rate=104505.23/min [4340000], rate=104578.31/min [4350000], rate=104735.15/min [4360000], rate=104849.70/min [4370000], rate=105006.01/min [4380000], rate=105077.97/min [4390000], rate=104898.45/min [4400000], rate=104845.12/min [4410000], rate=104667.72/min [4420000], rate=104491.73/min [4430000], rate=104358.07/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir --filt_file /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 12000000.00 reads per min processed... 18000000.00 reads per min processed... 12000000.00 reads per min processed... 15000000.00 reads per min processed... 12000000.00 reads per min processed... 14000000.00 reads per min processed... 12000000.00 reads per min processed... 13500000.00 reads per min processed... 12000000.00 reads per min processed... 13200000.00 reads per min processed... 12000000.00 reads per min processed... 13000000.00 reads per min processed... 12000000.00 reads per min processed... 12857142.86 reads per min processed... 12000000.00 reads per min processed... 12750000.00 reads per min processed... 12000000.00 reads per min processed... 12666666.67 reads per min processed... 12000000.00 reads per min processed... 12600000.00 reads per min processed... 12000000.00 reads per min processed... 12545454.55 reads per min processed... 12000000.00 reads per min processed... 12500000.00 reads per min processed... 12000000.00 reads per min processed... 12461538.46 reads per min processed... 12000000.00 reads per min processed... 12428571.43 reads per min processed... 12000000.00 reads per min processed... 12400000.00 reads per min processed... 12000000.00 reads per min processed... 12375000.00 reads per min processed... 12000000.00 reads per min processed... 12352941.18 reads per min processed... 12000000.00 reads per min processed... 12333333.33 reads per min processed... 12000000.00 reads per min processed... 11700000.00 reads per min processed... 12000000.00 reads per min processed... 11714285.71 reads per min processed... 12000000.00 reads per min processed... 11727272.73 reads per min processed... 12000000.00 reads per min processed... 11739130.43 reads per min processed... 12000000.00 reads per min processed... 11750000.00 reads per min processed... 12000000.00 reads per min processed... 11760000.00 reads per min processed... 12000000.00 reads per min processed... 11769230.77 reads per min processed... 12000000.00 reads per min processed... 11777777.78 reads per min processed... 12000000.00 reads per min processed... 11785714.29 reads per min processed... 12000000.00 reads per min processed... 11793103.45 reads per min processed... 12000000.00 reads per min processed... 11800000.00 reads per min processed... 11250000.00 reads per min processed... 10764705.88 reads per min processed... 10628571.43 reads per min processed... 10216216.22 reads per min processed... 10105263.16 reads per min processed... 9750000.00 reads per min processed... 9658536.59 reads per min processed... 9571428.57 reads per min processed... 9272727.27 reads per min processed... 9200000.00 reads per min processed... 8936170.21 reads per min processed... 8875000.00 reads per min processed... 8816326.53 reads per min processed... 8760000.00 reads per min processed... 8538461.54 reads per min processed... 8490566.04 reads per min processed... 8444444.44 reads per min processed... 8250000.00 reads per min processed... 8210526.32 reads per min processed... 8172413.79 reads per min processed... 8135593.22 reads per min processed... 8100000.00 reads per min processed... 8065573.77 reads per min processed... 7904761.90 reads per min processed... 7875000.00 reads per min processed... 7846153.85 reads per min processed... 7818181.82 reads per min processed... 7791044.78 reads per min processed... 7652173.91 reads per min processed... 7628571.43 reads per min processed... 7605633.80 reads per min processed... 7583333.33 reads per min processed... 7666666.67 reads per min processed... 7643835.62 reads per min processed... 7726027.40 reads per min processed... 7702702.70 reads per min processed... 7783783.78 reads per min processed... 7760000.00 reads per min processed... 7840000.00 reads per min processed... 7815789.47 reads per min processed... 7894736.84 reads per min processed... 7870129.87 reads per min processed... 7846153.85 reads per min processed... 7923076.92 reads per min processed... 7898734.18 reads per min processed... 7974683.54 reads per min processed... 7950000.00 reads per min processed... 8025000.00 reads per min processed... 8000000.00 reads per min processed... 7975609.76 reads per min processed... 8048780.49 reads per min processed... 8024096.39 reads per min processed... 8096385.54 reads per min processed... 8071428.57 reads per min processed... 8142857.14 reads per min processed... 8117647.06 reads per min processed... 8188235.29 reads per min processed... 8162790.70 reads per min processed... 8232558.14 reads per min processed... 8206896.55 reads per min processed... 8275862.07 reads per min processed... 8250000.00 reads per min processed... 8318181.82 reads per min processed... 8292134.83 reads per min processed... 8359550.56 reads per min processed... 8333333.33 reads per min processed... 8307692.31 reads per min processed... 8373626.37 reads per min processed... 8347826.09 reads per min processed... 8413043.48 reads per min processed... 8387096.77 reads per min processed... 8451612.90 reads per min processed... 8425531.91 reads per min processed... 8489361.70 reads per min processed... 8463157.89 reads per min processed... 8526315.79 reads per min processed... 8500000.00 reads per min processed... 8474226.80 reads per min processed... 8448979.59 reads per min processed... 8340000.00 reads per min processed... 8316831.68 reads per min processed... 8294117.65 reads per min processed... 8271844.66 reads per min processed... 8171428.57 reads per min processed... 8150943.40 reads per min processed... 8130841.12 reads per min processed... 8111111.11 reads per min processed... 8091743.12 reads per min processed... 8072727.27 reads per min processed... 7982142.86 reads per min processed... 7964601.77 reads per min processed... 7947368.42 reads per min processed... 7930434.78 reads per min processed... 7846153.85 reads per min processed... 7830508.47 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.3bujw4M4f8/1173_LAF_T1_RNA_SLD_01_A23T55JLT4_2.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -551351.404580 EM: Round [1] log likelihood: -550108.505626 EM: Round [2] log likelihood: -549708.148837 EM: Round [3] log likelihood: -549533.065990 EM: Round [4] log likelihood: -549443.987322 EM: Round [5] log likelihood: -549394.553129 EM: Round [6] log likelihood: -549365.356690 EM: Round [7] log likelihood: -549347.172113 EM: Round [8] log likelihood: -549335.288241 EM: Round [9] log likelihood: -549327.178136 EM: Round [10] log likelihood: -549321.427785 EM: Round [11] log likelihood: -549317.213441 EM: Round [12] log likelihood: -549314.036263 EM: Round [13] log likelihood: -549311.582833 EM: Round [14] log likelihood: -549309.649337 EM: Round [15] log likelihood: -549308.098977 EM: Round [16] log likelihood: -549306.837268 EM: Round [17] log likelihood: -549305.797248 EM: Round [18] log likelihood: -549304.930366 EM: Round [19] log likelihood: -549304.200701 EM: Round [20] log likelihood: -549303.581194 EM: Round [21] log likelihood: -549303.051133 EM: Round [22] log likelihood: -549302.594444 EM: Round [23] log likelihood: -549302.198488 EM: Round [24] log likelihood: -549301.853216 EM: Round [25] log likelihood: -549301.550555 EM: Round [26] log likelihood: -549301.283961 EM: Round [27] log likelihood: -549301.048081 EM: Round [28] log likelihood: -549300.838506 EM: Round [29] log likelihood: -549300.651578 EM: Round [30] log likelihood: -549300.484242 EM: Round [31] log likelihood: -549300.333931 EM: Round [32] log likelihood: -549300.198477 EM: Round [33] log likelihood: -549300.076040 EM: Round [34] log likelihood: -549299.965050 EM: Round [35] log likelihood: -549299.864162 EM: Round [36] log likelihood: -549299.772218 EM: Round [37] log likelihood: -549299.688220 EM: Round [38] log likelihood: -549299.611301 EM: Round [39] log likelihood: -549299.540707 EM: Round [40] log likelihood: -549299.475779 EM: Round [41] log likelihood: -549299.415943 EM: Round [42] log likelihood: -549299.360692 EM: Round [43] log likelihood: -549299.309579 EM: Round [44] log likelihood: -549299.262212 EM: Round [45] log likelihood: -549299.218241 EM: Round [46] log likelihood: -549299.177356 EM: Round [47] log likelihood: -549299.139283 EM: Round [48] log likelihood: -549299.103774 EM: Round [49] log likelihood: -549299.070610 EM: Round [50] log likelihood: -549299.039594 EM: Round [51] log likelihood: -549299.010547 EM: Round [52] log likelihood: -549298.983312 EM: Round [53] log likelihood: -549298.957742 EM: Round [54] log likelihood: -549298.933710 EM: Round [55] log likelihood: -549298.911095 EM: Round [56] log likelihood: -549298.889793 EM: Round [57] log likelihood: -549298.869706 EM: Round [58] log likelihood: -549298.850744 EM: Round [59] log likelihood: -549298.832829 EM: Round [60] log likelihood: -549298.815885 EM: Round [61] log likelihood: -549298.799846 EM: Round [62] log likelihood: -549298.784650 EM: Round [63] log likelihood: -549298.770241 EM: Round [64] log likelihood: -549298.756566 EM: Round [65] log likelihood: -549298.743578 EM: Round [66] log likelihood: -549298.731232 EM: Round [67] log likelihood: -549298.719489 EM: Round [68] log likelihood: -549298.708310 EM: Round [69] log likelihood: -549298.697662 EM: Round [70] log likelihood: -549298.687511 EM: Round [71] log likelihood: -549298.677828 EM: Round [72] log likelihood: -549298.668586 EM: Round [73] log likelihood: -549298.659759 EM: Round [74] log likelihood: -549298.651323 EM: Round [75] log likelihood: -549298.643257 EM: Round [76] log likelihood: -549298.635539 EM: Round [77] log likelihood: -549298.628150 EM: Round [78] log likelihood: -549298.621073 EM: Round [79] log likelihood: -549298.614291 EM: Round [80] log likelihood: -549298.607787 EM: Round [81] log likelihood: -549298.601548 EM: Round [82] log likelihood: -549298.595560 EM: Round [83] log likelihood: -549298.589810 EM: Round [84] log likelihood: -549298.584285 EM: Round [85] log likelihood: -549298.578975 EM: Round [86] log likelihood: -549298.573870 EM: Round [87] log likelihood: -549298.568958 EM: Round [88] log likelihood: -549298.564231 EM: Round [89] log likelihood: -549298.559679 EM: Round [90] log likelihood: -549298.555296 EM: Round [91] log likelihood: -549298.551071 EM: Round [92] log likelihood: -549298.547000 EM: Round [93] log likelihood: -549298.543073 EM: Round [94] log likelihood: -549298.539286 EM: Round [95] log likelihood: -549298.535631 EM: Round [96] log likelihood: -549298.532103 EM: Round [97] log likelihood: -549298.528695 EM: Round [98] log likelihood: -549298.525404 EM: Round [99] log likelihood: -549298.522224 EM: Round [100] log likelihood: -549298.519150 EM: Round [101] log likelihood: -549298.516177 EM: Round [102] log likelihood: -549298.513303 EM: Round [103] log likelihood: -549298.510521 EM: Round [104] log likelihood: -549298.507829 EM: Round [105] log likelihood: -549298.505224 EM: Round [106] log likelihood: -549298.502700 EM: Round [107] log likelihood: -549298.500256 EM: Round [108] log likelihood: -549298.497889 EM: Round [109] log likelihood: -549298.495594 EM: Round [110] log likelihood: -549298.493370 EM: Round [111] log likelihood: -549298.491213 EM: Round [112] log likelihood: -549298.489121 EM: Round [113] log likelihood: -549298.487093 EM: Round [114] log likelihood: -549298.485124 EM: Round [115] log likelihood: -549298.483213 EM: Round [116] log likelihood: -549298.481359 EM: Round [117] log likelihood: -549298.479558 EM: Round [118] log likelihood: -549298.477809 EM: Round [119] log likelihood: -549298.476111 EM: Round [120] log likelihood: -549298.474460 EM: Round [121] log likelihood: -549298.472856 EM: Round [122] log likelihood: -549298.471298 EM: Round [123] log likelihood: -549298.469782 EM: Round [124] log likelihood: -549298.468309 EM: Round [125] log likelihood: -549298.466876 EM: Round [126] log likelihood: -549298.465482 EM: Round [127] log likelihood: -549298.464126 EM: Round [128] log likelihood: -549298.462807 EM: Round [129] log likelihood: -549298.461523 EM: Round [130] log likelihood: -549298.460273 EM: Round [131] log likelihood: -549298.459057 EM: Round [132] log likelihood: -549298.457872 EM: Round [133] log likelihood: -549298.456718 EM: Round [134] log likelihood: -549298.455595 EM: Round [135] log likelihood: -549298.454500 EM: Round [136] log likelihood: -549298.453434 EM: Round [137] log likelihood: -549298.452394 EM: Round [138] log likelihood: -549298.451382 EM: Round [139] log likelihood: -549298.450394 EM: Round [140] log likelihood: -549298.449432 EM: Round [141] log likelihood: -549298.448494 EM: Round [142] log likelihood: -549298.447579 EM: Round [143] log likelihood: -549298.446687 EM: Round [144] log likelihood: -549298.445816 EM: Round [145] log likelihood: -549298.444967 EM: Round [146] log likelihood: -549298.444139 EM: Round [147] log likelihood: -549298.443331 EM: Round [148] log likelihood: -549298.442542 EM: Round [149] log likelihood: -549298.441772 EM: Round [150] log likelihood: -549298.441021 EM: Round [151] log likelihood: -549298.440288 EM: Round [152] log likelihood: -549298.439572 EM: Round [153] log likelihood: -549298.438872 EM: Round [154] log likelihood: -549298.438189 EM: Round [155] log likelihood: -549298.437523 EM: Round [156] log likelihood: -549298.436871 EM: Round [157] log likelihood: -549298.436235 EM: Round [158] log likelihood: -549298.435614 EM: Round [159] log likelihood: -549298.435006 EM: Round [160] log likelihood: -549298.434413 EM: Round [161] log likelihood: -549298.433833 EM: Round [162] log likelihood: -549298.433266 EM: Round [163] log likelihood: -549298.432712 EM: Round [164] log likelihood: -549298.432171 EM: Round [165] log likelihood: -549298.431641 EM: Round [166] log likelihood: -549298.431124 EM: Round [167] log likelihood: -549298.430618 EM: Round [168] log likelihood: -549298.430123 EM: Round [169] log likelihood: -549298.429639 EM: Round [170] log likelihood: -549298.429166 EM: Round [171] log likelihood: -549298.428703 EM: Round [172] log likelihood: -549298.428250 EM: Round [173] log likelihood: -549298.427807 EM: Round [174] log likelihood: -549298.427374 EM: Round [175] log likelihood: -549298.426950 EM: Round [176] log likelihood: -549298.426535 EM: Round [177] log likelihood: -549298.426129 EM: Round [178] log likelihood: -549298.425732 EM: Round [179] log likelihood: -549298.425343 EM: Round [180] log likelihood: -549298.424962 EM: Round [181] log likelihood: -549298.424590 EM: Round [182] log likelihood: -549298.424225 EM: Round [183] log likelihood: -549298.423868 EM: Round [184] log likelihood: -549298.423518 EM: Round [185] log likelihood: -549298.423176 EM: Round [186] log likelihood: -549298.422841 EM: Round [187] log likelihood: -549298.422513 EM: Round [188] log likelihood: -549298.422191 EM: Round [189] log likelihood: -549298.421877 EM: Round [190] log likelihood: -549298.421568 EM: Round [191] log likelihood: -549298.421266 EM: Round [192] log likelihood: -549298.420971 EM: Round [193] log likelihood: -549298.420681 EM: Round [194] log likelihood: -549298.420397 EM: Round [195] log likelihood: -549298.420119 EM: Round [196] log likelihood: -549298.419846 EM: Round [197] log likelihood: -549298.419579 EM: Round [198] log likelihood: -549298.419318 EM: Round [199] log likelihood: -549298.419061 EM: Round [200] log likelihood: -549298.418810 EM: Round [201] log likelihood: -549298.418564 EM: Round [202] log likelihood: -549298.418322 EM: Round [203] log likelihood: -549298.418086 EM: Round [204] log likelihood: -549298.417854 EM: Round [205] log likelihood: -549298.417627 EM: Round [206] log likelihood: -549298.417404 EM: Round [207] log likelihood: -549298.417185 EM: Round [208] log likelihood: -549298.416971 EM: Round [209] log likelihood: -549298.416761 EM: Round [210] log likelihood: -549298.416555 EM: Round [211] log likelihood: -549298.416353 EM: Round [212] log likelihood: -549298.416155 EM: Round [213] log likelihood: -549298.415961 EM: Round [214] log likelihood: -549298.415770 EM: Round [215] log likelihood: -549298.415583 EM: Round [216] log likelihood: -549298.415400 EM: Round [217] log likelihood: -549298.415220 EM: Round [218] log likelihood: -549298.415044 EM: Round [219] log likelihood: -549298.414871 EM: Round [220] log likelihood: -549298.414701 EM: Round [221] log likelihood: -549298.414535 EM: Round [222] log likelihood: -549298.414371 EM: Round [223] log likelihood: -549298.414211 EM: Round [224] log likelihood: -549298.414054 EM: Round [225] log likelihood: -549298.413900 EM: Round [226] log likelihood: -549298.413748 EM: Round [227] log likelihood: -549298.413600 EM: Round [228] log likelihood: -549298.413454 EM: Round [229] log likelihood: -549298.413311 EM: Round [230] log likelihood: -549298.413170 EM: Round [231] log likelihood: -549298.413033 EM: Round [232] log likelihood: -549298.412897 EM: Round [233] log likelihood: -549298.412764 EM: Round [234] log likelihood: -549298.412634 EM: Round [235] log likelihood: -549298.412506 EM: Round [236] log likelihood: -549298.412380 EM: Round [237] log likelihood: -549298.412257 EM: Round [238] log likelihood: -549298.412136 EM: Round [239] log likelihood: -549298.412017 EM: Round [240] log likelihood: -549298.411900 EM: Round [241] log likelihood: -549298.411786 EM: Round [242] log likelihood: -549298.411673 EM: Round [243] log likelihood: -549298.411563 EM: Round [244] log likelihood: -549298.411454 EM: Round [245] log likelihood: -549298.411348 EM: Round [246] log likelihood: -549298.411243 EM: Round [247] log likelihood: -549298.411140 EM: Round [248] log likelihood: -549298.411039 EM: Round [249] log likelihood: -549298.410940 EM: Stopping iterations at round 249 due to insufficient improvement in likelihood. EM: Starting log likelihood: -550684.921159 EM: Round [1] log likelihood: -549593.929013 EM: Round [2] log likelihood: -549249.867999 EM: Round [3] log likelihood: -549100.998928 EM: Round [4] log likelihood: -549025.788311 EM: Round [5] log likelihood: -548984.248463 EM: Round [6] log likelihood: -548959.795660 EM: Round [7] log likelihood: -548944.603242 EM: Round [8] log likelihood: -548934.695758 EM: Round [9] log likelihood: -548927.948581 EM: Round [10] log likelihood: -548923.175525 EM: Round [11] log likelihood: -548919.686461 EM: Round [12] log likelihood: -548917.063731 EM: Round [13] log likelihood: -548915.044981 EM: Round [14] log likelihood: -548913.459611 EM: Round [15] log likelihood: -548912.193116 EM: Round [16] log likelihood: -548911.166419 EM: Round [17] log likelihood: -548910.323497 EM: Round [18] log likelihood: -548909.623758 EM: Round [19] log likelihood: -548909.037194 EM: Round [20] log likelihood: -548908.541229 EM: Round [21] log likelihood: -548908.118610 EM: Round [22] log likelihood: -548907.755968 EM: Round [23] log likelihood: -548907.442812 EM: Round [24] log likelihood: -548907.170819 EM: Round [25] log likelihood: -548906.933317 EM: Round [26] log likelihood: -548906.724909 EM: Round [27] log likelihood: -548906.541194 EM: Round [28] log likelihood: -548906.378556 EM: Round [29] log likelihood: -548906.234000 EM: Round [30] log likelihood: -548906.105033 EM: Round [31] log likelihood: -548905.989566 EM: Round [32] log likelihood: -548905.885841 EM: Round [33] log likelihood: -548905.792366 EM: Round [34] log likelihood: -548905.707877 EM: Round [35] log likelihood: -548905.631288 EM: Round [36] log likelihood: -548905.561673 EM: Round [37] log likelihood: -548905.498231 EM: Round [38] log likelihood: -548905.440271 EM: Round [39] log likelihood: -548905.387193 EM: Round [40] log likelihood: -548905.338475 EM: Round [41] log likelihood: -548905.293661 EM: Round [42] log likelihood: -548905.252352 EM: Round [43] log likelihood: -548905.214197 EM: Round [44] log likelihood: -548905.178888 EM: Round [45] log likelihood: -548905.146151 EM: Round [46] log likelihood: -548905.115747 EM: Round [47] log likelihood: -548905.087459 EM: Round [48] log likelihood: -548905.061098 EM: Round [49] log likelihood: -548905.036493 EM: Round [50] log likelihood: -548905.013492 EM: Round [51] log likelihood: -548904.991960 EM: Round [52] log likelihood: -548904.971773 EM: Round [53] log likelihood: -548904.952823 EM: Round [54] log likelihood: -548904.935009 EM: Round [55] log likelihood: -548904.918243 EM: Round [56] log likelihood: -548904.902444 EM: Round [57] log likelihood: -548904.887538 EM: Round [58] log likelihood: -548904.873459 EM: Round [59] log likelihood: -548904.860146 EM: Round [60] log likelihood: -548904.847544 EM: Round [61] log likelihood: -548904.835603 EM: Round [62] log likelihood: -548904.824277 EM: Round [63] log likelihood: -548904.813523 EM: Round [64] log likelihood: -548904.803305 EM: Round [65] log likelihood: -548904.793585 EM: Round [66] log likelihood: -548904.784332 EM: Round [67] log likelihood: -548904.775516 EM: Round [68] log likelihood: -548904.767109 EM: Round [69] log likelihood: -548904.759086 EM: Round [70] log likelihood: -548904.751423 EM: Round [71] log likelihood: -548904.744099 EM: Round [72] log likelihood: -548904.737095 EM: Round [73] log likelihood: -548904.730390 EM: Round [74] log likelihood: -548904.723969 EM: Round [75] log likelihood: -548904.717815 EM: Round [76] log likelihood: -548904.711913 EM: Round [77] log likelihood: -548904.706249 EM: Round [78] log likelihood: -548904.700811 EM: Round [79] log likelihood: -548904.695586 EM: Round [80] log likelihood: -548904.690564 EM: Round [81] log likelihood: -548904.685734 EM: Round [82] log likelihood: -548904.681085 EM: Round [83] log likelihood: -548904.676610 EM: Round [84] log likelihood: -548904.672299 EM: Round [85] log likelihood: -548904.668144 EM: Round [86] log likelihood: -548904.664138 EM: Round [87] log likelihood: -548904.660273 EM: Round [88] log likelihood: -548904.656544 EM: Round [89] log likelihood: -548904.652944 EM: Round [90] log likelihood: -548904.649466 EM: Round [91] log likelihood: -548904.646106 EM: Round [92] log likelihood: -548904.642857 EM: Round [93] log likelihood: -548904.639716 EM: Round [94] log likelihood: -548904.636678 EM: Round [95] log likelihood: -548904.633738 EM: Round [96] log likelihood: -548904.630891 EM: Round [97] log likelihood: -548904.628135 EM: Round [98] log likelihood: -548904.625465 EM: Round [99] log likelihood: -548904.622878 EM: Round [100] log likelihood: -548904.620370 EM: Round [101] log likelihood: -548904.617939 EM: Round [102] log likelihood: -548904.615580 EM: Round [103] log likelihood: -548904.613293 EM: Round [104] log likelihood: -548904.611073 EM: Round [105] log likelihood: -548904.608918 EM: Round [106] log likelihood: -548904.606826 EM: Round [107] log likelihood: -548904.604794 EM: Round [108] log likelihood: -548904.602820 EM: Round [109] log likelihood: -548904.600903 EM: Round [110] log likelihood: -548904.599039 EM: Round [111] log likelihood: -548904.597227 EM: Round [112] log likelihood: -548904.595466 EM: Round [113] log likelihood: -548904.593753 EM: Round [114] log likelihood: -548904.592087 EM: Round [115] log likelihood: -548904.590466 EM: Round [116] log likelihood: -548904.588889 EM: Round [117] log likelihood: -548904.587353 EM: Round [118] log likelihood: -548904.585859 EM: Round [119] log likelihood: -548904.584404 EM: Round [120] log likelihood: -548904.582987 EM: Round [121] log likelihood: -548904.581607 EM: Round [122] log likelihood: -548904.580263 EM: Round [123] log likelihood: -548904.578953 EM: Round [124] log likelihood: -548904.577677 EM: Round [125] log likelihood: -548904.576433 EM: Round [126] log likelihood: -548904.575221 EM: Round [127] log likelihood: -548904.574039 EM: Round [128] log likelihood: -548904.572887 EM: Round [129] log likelihood: -548904.571763 EM: Round [130] log likelihood: -548904.570667 EM: Round [131] log likelihood: -548904.569598 EM: Round [132] log likelihood: -548904.568555 EM: Round [133] log likelihood: -548904.567537 EM: Round [134] log likelihood: -548904.566544 EM: Round [135] log likelihood: -548904.565575 EM: Round [136] log likelihood: -548904.564629 EM: Round [137] log likelihood: -548904.563706 EM: Round [138] log likelihood: -548904.562805 EM: Round [139] log likelihood: -548904.561924 EM: Round [140] log likelihood: -548904.561065 EM: Round [141] log likelihood: -548904.560226 EM: Round [142] log likelihood: -548904.559406 EM: Round [143] log likelihood: -548904.558605 EM: Round [144] log likelihood: -548904.557823 EM: Round [145] log likelihood: -548904.557059 EM: Round [146] log likelihood: -548904.556312 EM: Round [147] log likelihood: -548904.555582 EM: Round [148] log likelihood: -548904.554869 EM: Round [149] log likelihood: -548904.554172 EM: Round [150] log likelihood: -548904.553491 EM: Round [151] log likelihood: -548904.552825 EM: Round [152] log likelihood: -548904.552174 EM: Round [153] log likelihood: -548904.551537 EM: Round [154] log likelihood: -548904.550915 EM: Round [155] log likelihood: -548904.550306 EM: Round [156] log likelihood: -548904.549711 EM: Round [157] log likelihood: -548904.549129 EM: Round [158] log likelihood: -548904.548560 EM: Round [159] log likelihood: -548904.548003 EM: Round [160] log likelihood: -548904.547458 EM: Round [161] log likelihood: -548904.546925 EM: Round [162] log likelihood: -548904.546403 EM: Round [163] log likelihood: -548904.545893 EM: Round [164] log likelihood: -548904.545394 EM: Round [165] log likelihood: -548904.544905 EM: Round [166] log likelihood: -548904.544427 EM: Round [167] log likelihood: -548904.543959 EM: Round [168] log likelihood: -548904.543501 EM: Round [169] log likelihood: -548904.543052 EM: Round [170] log likelihood: -548904.542613 EM: Round [171] log likelihood: -548904.542183 EM: Round [172] log likelihood: -548904.541763 EM: Round [173] log likelihood: -548904.541351 EM: Round [174] log likelihood: -548904.540947 EM: Round [175] log likelihood: -548904.540552 EM: Round [176] log likelihood: -548904.540165 EM: Round [177] log likelihood: -548904.539787 EM: Round [178] log likelihood: -548904.539415 EM: Round [179] log likelihood: -548904.539052 EM: Round [180] log likelihood: -548904.538696 EM: Round [181] log likelihood: -548904.538347 EM: Round [182] log likelihood: -548904.538006 EM: Round [183] log likelihood: -548904.537671 EM: Round [184] log likelihood: -548904.537343 EM: Round [185] log likelihood: -548904.537022 EM: Round [186] log likelihood: -548904.536707 EM: Round [187] log likelihood: -548904.536399 EM: Round [188] log likelihood: -548904.536096 EM: Round [189] log likelihood: -548904.535800 EM: Round [190] log likelihood: -548904.535510 EM: Round [191] log likelihood: -548904.535225 EM: Round [192] log likelihood: -548904.534946 EM: Round [193] log likelihood: -548904.534673 EM: Round [194] log likelihood: -548904.534405 EM: Round [195] log likelihood: -548904.534142 EM: Round [196] log likelihood: -548904.533885 EM: Round [197] log likelihood: -548904.533632 EM: Round [198] log likelihood: -548904.533385 EM: Round [199] log likelihood: -548904.533142 EM: Round [200] log likelihood: -548904.532904 EM: Round [201] log likelihood: -548904.532671 EM: Round [202] log likelihood: -548904.532442 EM: Round [203] log likelihood: -548904.532218 EM: Round [204] log likelihood: -548904.531998 EM: Round [205] log likelihood: -548904.531782 EM: Round [206] log likelihood: -548904.531571 EM: Round [207] log likelihood: -548904.531363 EM: Round [208] log likelihood: -548904.531159 EM: Round [209] log likelihood: -548904.530960 EM: Round [210] log likelihood: -548904.530764 EM: Round [211] log likelihood: -548904.530572 EM: Round [212] log likelihood: -548904.530383 EM: Round [213] log likelihood: -548904.530198 EM: Round [214] log likelihood: -548904.530017 EM: Round [215] log likelihood: -548904.529839 EM: Round [216] log likelihood: -548904.529664 EM: Round [217] log likelihood: -548904.529492 EM: Round [218] log likelihood: -548904.529324 EM: Round [219] log likelihood: -548904.529159 EM: Round [220] log likelihood: -548904.528997 EM: Round [221] log likelihood: -548904.528838 EM: Round [222] log likelihood: -548904.528682 EM: Round [223] log likelihood: -548904.528529 EM: Round [224] log likelihood: -548904.528379 EM: Round [225] log likelihood: -548904.528231 EM: Round [226] log likelihood: -548904.528087 EM: Round [227] log likelihood: -548904.527944 EM: Round [228] log likelihood: -548904.527805 EM: Round [229] log likelihood: -548904.527668 EM: Round [230] log likelihood: -548904.527533 EM: Round [231] log likelihood: -548904.527401 EM: Round [232] log likelihood: -548904.527272 EM: Round [233] log likelihood: -548904.527145 EM: Round [234] log likelihood: -548904.527020 EM: Round [235] log likelihood: -548904.526897 EM: Round [236] log likelihood: -548904.526777 EM: Round [237] log likelihood: -548904.526658 EM: Round [238] log likelihood: -548904.526542 EM: Round [239] log likelihood: -548904.526428 EM: Round [240] log likelihood: -548904.526316 EM: Round [241] log likelihood: -548904.526206 EM: Round [242] log likelihood: -548904.526098 EM: Round [243] log likelihood: -548904.525992 EM: Round [244] log likelihood: -548904.525887 EM: Round [245] log likelihood: -548904.525785 EM: Round [246] log likelihood: -548904.525684 EM: Round [247] log likelihood: -548904.525586 EM: Stopping iterations at round 247 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 79906347 > /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir > /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir --annotate /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir -done, see /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 991, filtered: 8149) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.3bujw4M4f8/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.3bujw4M4f8/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000181577.16] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000260236.1] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [IGH-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000249175.1] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000246323.2] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000250251.6] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000271434.3] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000267198.1] WARNING, no entry stored in dbm for [ENSG00000131484.4] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000238035.8] WARNING, no entry stored in dbm for [ENSG00000226824.7] WARNING, no entry stored in dbm for [ENSG00000278591.1] WARNING, no entry stored in dbm for [ENSG00000175772.11] WARNING, no entry stored in dbm for [ENSG00000275219.1] WARNING, no entry stored in dbm for [ENSG00000175772.11] WARNING, no entry stored in dbm for [ENSG00000274452.1] WARNING, no entry stored in dbm for [ENSG00000175772.11] WARNING, no entry stored in dbm for [ENSG00000274062.1] WARNING, no entry stored in dbm for [ENSG00000175772.11] WARNING, no entry stored in dbm for [ENSG00000274862.1] WARNING, no entry stored in dbm for [ENSG00000175772.11] WARNING, no entry stored in dbm for [ENSG00000278774.1] WARNING, no entry stored in dbm for [ENSG00000175772.11] WARNING, no entry stored in dbm for [ENSG00000277903.1] WARNING, no entry stored in dbm for [ENSG00000175772.11] WARNING, no entry stored in dbm for [ENSG00000276596.1] WARNING, no entry stored in dbm for [ENSG00000175772.11] WARNING, no entry stored in dbm for [ENSG00000278048.1] WARNING, no entry stored in dbm for [ENSG00000175772.11] WARNING, no entry stored in dbm for [ENSG00000274432.1] WARNING, no entry stored in dbm for [ENSG00000175772.11] WARNING, no entry stored in dbm for [ENSG00000273709.1] WARNING, no entry stored in dbm for [ENSG00000175772.11] WARNING, no entry stored in dbm for [ENSG00000275616.1] WARNING, no entry stored in dbm for [ENSG00000175772.11] WARNING, no entry stored in dbm for [ENSG00000223336.1] WARNING, no entry stored in dbm for [ENSG00000175772.11] WARNING, no entry stored in dbm for [ENSG00000223247.1] WARNING, no entry stored in dbm for [ENSG00000175772.11] WARNING, no entry stored in dbm for [ENSG00000230510.7] WARNING, no entry stored in dbm for [ENSG00000230510.7] WARNING, no entry stored in dbm for [ENSG00000278665.1] WARNING, no entry stored in dbm for [ENSG00000225159.1] WARNING, no entry stored in dbm for [ENSG00000259161.2] WARNING, no entry stored in dbm for [ENSG00000229415.10] WARNING, no entry stored in dbm for [ENSG00000276758.1] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000224086.6] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000224086.6] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000224086.6] WARNING, no entry stored in dbm for [IGL-.g@-ext] WARNING, no entry stored in dbm for [ENSG00000224086.6] WARNING, no entry stored in dbm for [ENSG00000215283.3] WARNING, no entry stored in dbm for [ENSG00000255391.1] WARNING, no entry stored in dbm for [ENSG00000245060.8] WARNING, no entry stored in dbm for [ENSG00000248079.3] WARNING, no entry stored in dbm for [IGL.g@-ext] WARNING, no entry stored in dbm for [ENSG00000257612.2] WARNING, no entry stored in dbm for [ENSG00000260086.3] WARNING, no entry stored in dbm for [ENSG00000217801.10] WARNING, no entry stored in dbm for [ENSG00000261499.2] WARNING, no entry stored in dbm for [ENSG00000239268.3] WARNING, no entry stored in dbm for [ENSG00000267506.5] WARNING, no entry stored in dbm for [ENSG00000225840.2] WARNING, no entry stored in dbm for [ENSG00000222043.2] WARNING, no entry stored in dbm for [ENSG00000255644.1] WARNING, no entry stored in dbm for [ENSG00000229930.1] WARNING, no entry stored in dbm for [ENSG00000234350.5] WARNING, no entry stored in dbm for [ENSG00000279217.1] WARNING, no entry stored in dbm for [ENSG00000251705.1] WARNING, no entry stored in dbm for [ENSG00000241743.4] WARNING, no entry stored in dbm for [ENSG00000233559.2] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000273270.1] WARNING, no entry stored in dbm for [ENSG00000285564.2] WARNING, no entry stored in dbm for [ENSG00000235890.2] WARNING, no entry stored in dbm for [ENSG00000230572.5] WARNING, no entry stored in dbm for [ENSG00000201098.1] WARNING, no entry stored in dbm for [ENSG00000202380.1] WARNING, no entry stored in dbm for [ENSG00000271739.1] WARNING, no entry stored in dbm for [ENSG00000253089.1] WARNING, no entry stored in dbm for [ENSG00000259867.6] WARNING, no entry stored in dbm for [ENSG00000248736.3] WARNING, no entry stored in dbm for [ENSG00000267055.1] WARNING, no entry stored in dbm for [ENSG00000226823.1] WARNING, no entry stored in dbm for [ENSG00000261713.6] WARNING, no entry stored in dbm for [ENSG00000213442.5] WARNING, no entry stored in dbm for [ENSG00000248980.1] WARNING, no entry stored in dbm for [ENSG00000269893.8] WARNING, no entry stored in dbm for [ENSG00000255717.7] WARNING, no entry stored in dbm for [ENSG00000255717.7] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000254042.2] WARNING, no entry stored in dbm for [ENSG00000237949.2] WARNING, no entry stored in dbm for [ENSG00000215424.10] WARNING, no entry stored in dbm for [ENSG00000264672.6] WARNING, no entry stored in dbm for [ENSG00000262898.3] WARNING, no entry stored in dbm for [ENSG00000253541.1] WARNING, no entry stored in dbm for [ENSG00000258526.7] WARNING, no entry stored in dbm for [ENSG00000224897.8] WARNING, no entry stored in dbm for [ENSG00000267586.7] WARNING, no entry stored in dbm for [ENSG00000219747.1] WARNING, no entry stored in dbm for [ENSG00000224796.1] WARNING, no entry stored in dbm for [ENSG00000257074.3] WARNING, no entry stored in dbm for [ENSG00000241030.1] WARNING, no entry stored in dbm for [ENSG00000274210.1] WARNING, no entry stored in dbm for [ENSG00000215386.13] WARNING, no entry stored in dbm for [ENSG00000248634.1] WARNING, no entry stored in dbm for [ENSG00000201059.1] WARNING, no entry stored in dbm for [ENSG00000212454.1] WARNING, no entry stored in dbm for [ENSG00000202263.1] WARNING, no entry stored in dbm for [ENSG00000243352.3] WARNING, no entry stored in dbm for [ENSG00000243374.3] WARNING, no entry stored in dbm for [ENSG00000275132.1] WARNING, no entry stored in dbm for [ENSG00000239466.3] WARNING, no entry stored in dbm for [ENSG00000200783.1] WARNING, no entry stored in dbm for [ENSG00000235043.3] WARNING, no entry stored in dbm for [ENSG00000251185.1] WARNING, no entry stored in dbm for [ENSG00000260898.6] WARNING, no entry stored in dbm for [ENSG00000200028.1] WARNING, no entry stored in dbm for [ENSG00000212396.1] WARNING, no entry stored in dbm for [ENSG00000239184.1] WARNING, no entry stored in dbm for [ENSG00000267433.1] WARNING, no entry stored in dbm for [ENSG00000229419.1] WARNING, no entry stored in dbm for [ENSG00000196204.12] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000280159.1] WARNING, no entry stored in dbm for [ENSG00000261348.2] WARNING, no entry stored in dbm for [ENSG00000232973.13] WARNING, no entry stored in dbm for [ENSG00000200156.1] WARNING, no entry stored in dbm for [ENSG00000200972.1] WARNING, no entry stored in dbm for [ENSG00000199568.1] WARNING, no entry stored in dbm for [ENSG00000273125.2] WARNING, no entry stored in dbm for [ENSG00000257557.2] WARNING, no entry stored in dbm for [ENSG00000286989.1] WARNING, no entry stored in dbm for [ENSG00000231123.1] WARNING, no entry stored in dbm for [ENSG00000187172.15] WARNING, no entry stored in dbm for [ENSG00000266325.1] WARNING, no entry stored in dbm for [ENSG00000253341.1] WARNING, no entry stored in dbm for [ENSG00000229539.1] WARNING, no entry stored in dbm for [ENSG00000214487.3] WARNING, no entry stored in dbm for [ENSG00000259952.1] WARNING, no entry stored in dbm for [ENSG00000270012.1] WARNING, no entry stored in dbm for [ENSG00000250579.2] WARNING, no entry stored in dbm for [ENSG00000249541.1] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000237973.1] WARNING, no entry stored in dbm for [ENSG00000261556.10] WARNING, no entry stored in dbm for [ENSG00000224776.3] WARNING, no entry stored in dbm for [ENSG00000234337.4] WARNING, no entry stored in dbm for [ENSG00000284448.1] WARNING, no entry stored in dbm for [ENSG00000275334.1] WARNING, no entry stored in dbm for [ENSG00000266192.3] WARNING, no entry stored in dbm for [ENSG00000248117.1] WARNING, no entry stored in dbm for [ENSG00000280414.1] WARNING, no entry stored in dbm for [ENSG00000246331.2] WARNING, no entry stored in dbm for [ENSG00000248309.7] WARNING, no entry stored in dbm for [ENSG00000238013.1] WARNING, no entry stored in dbm for [ENSG00000281896.1] WARNING, no entry stored in dbm for [ENSG00000232527.8] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000235645.2] WARNING, no entry stored in dbm for [ENSG00000254689.3] WARNING, no entry stored in dbm for [ENSG00000225872.4] WARNING, no entry stored in dbm for [ENSG00000224017.2] WARNING, no entry stored in dbm for [ENSG00000248131.6] WARNING, no entry stored in dbm for [ENSG00000222005.9] WARNING, no entry stored in dbm for [ENSG00000238266.2] WARNING, no entry stored in dbm for [ENSG00000179136.7] WARNING, no entry stored in dbm for [ENSG00000253394.6] WARNING, no entry stored in dbm for [ENSG00000249743.6] WARNING, no entry stored in dbm for [ENSG00000226696.6] WARNING, no entry stored in dbm for [ENSG00000286042.1] WARNING, no entry stored in dbm for [ENSG00000233930.4] WARNING, no entry stored in dbm for [ENSG00000286948.1] WARNING, no entry stored in dbm for [ENSG00000253218.1] WARNING, no entry stored in dbm for [ENSG00000226419.8] WARNING, no entry stored in dbm for [ENSG00000233308.2] WARNING, no entry stored in dbm for [ENSG00000284543.1] WARNING, no entry stored in dbm for [ENSG00000272109.2] WARNING, no entry stored in dbm for [ENSG00000251432.7] WARNING, no entry stored in dbm for [ENSG00000259673.6] WARNING, no entry stored in dbm for [ENSG00000224668.1] WARNING, no entry stored in dbm for [ENSG00000264578.1] WARNING, no entry stored in dbm for [ENSG00000285219.2] WARNING, no entry stored in dbm for [ENSG00000271418.1] WARNING, no entry stored in dbm for [ENSG00000278665.1] WARNING, no entry stored in dbm for [ENSG00000238013.1] WARNING, no entry stored in dbm for [ENSG00000250494.1] WARNING, no entry stored in dbm for [ENSG00000249031.1] WARNING, no entry stored in dbm for [ENSG00000161912.18] WARNING, no entry stored in dbm for [ENSG00000232829.3] WARNING, no entry stored in dbm for [ENSG00000249353.2] WARNING, no entry stored in dbm for [ENSG00000262533.1] WARNING, no entry stored in dbm for [ENSG00000187172.15] WARNING, no entry stored in dbm for [ENSG00000214433.4] WARNING, no entry stored in dbm for [ENSG00000230189.7] WARNING, no entry stored in dbm for [ENSG00000268388.6] WARNING, no entry stored in dbm for [ENSG00000257252.6] WARNING, no entry stored in dbm for [ENSG00000233695.2] WARNING, no entry stored in dbm for [ENSG00000256195.3] WARNING, no entry stored in dbm for [ENSG00000281896.1] WARNING, no entry stored in dbm for [ENSG00000233708.1] WARNING, no entry stored in dbm for [ENSG00000215498.9] WARNING, no entry stored in dbm for [ENSG00000237773.7] WARNING, no entry stored in dbm for [ENSG00000267083.1] WARNING, no entry stored in dbm for [ENSG00000278733.1] WARNING, no entry stored in dbm for [ENSG00000240401.9] WARNING, no entry stored in dbm for [ENSG00000226017.2] WARNING, no entry stored in dbm for [ENSG00000237549.1] WARNING, no entry stored in dbm for [ENSG00000234312.1] WARNING, no entry stored in dbm for [ENSG00000228887.3] WARNING, no entry stored in dbm for [ENSG00000229280.1] WARNING, no entry stored in dbm for [ENSG00000179818.14] WARNING, no entry stored in dbm for [ENSG00000266014.2] WARNING, no entry stored in dbm for [ENSG00000249835.2] WARNING, no entry stored in dbm for [ENSG00000254275.6] WARNING, no entry stored in dbm for [ENSG00000262488.1] WARNING, no entry stored in dbm for [ENSG00000288638.1] WARNING, no entry stored in dbm for [ENSG00000226950.8] WARNING, no entry stored in dbm for [ENSG00000229754.1] WARNING, no entry stored in dbm for [ENSG00000275014.1] WARNING, no entry stored in dbm for [ENSG00000259020.3] WARNING, no entry stored in dbm for [ENSG00000250391.1] WARNING, no entry stored in dbm for [ENSG00000285427.1] WARNING, no entry stored in dbm for [ENSG00000168405.17] WARNING, no entry stored in dbm for [ENSG00000243830.2] WARNING, no entry stored in dbm for [ENSG00000251504.1] WARNING, no entry stored in dbm for [ENSG00000263551.6] WARNING, no entry stored in dbm for [ENSG00000250979.1] WARNING, no entry stored in dbm for [ENSG00000286277.1] WARNING, no entry stored in dbm for [ENSG00000273328.5] WARNING, no entry stored in dbm for [ENSG00000236830.7] WARNING, no entry stored in dbm for [ENSG00000272150.5] WARNING, no entry stored in dbm for [ENSG00000288596.2] WARNING, no entry stored in dbm for [ENSG00000261659.2] WARNING, no entry stored in dbm for [ENSG00000224750.6] WARNING, no entry stored in dbm for [ENSG00000230131.6] WARNING, no entry stored in dbm for [ENSG00000255568.3] WARNING, no entry stored in dbm for [ENSG00000198358.4] WARNING, no entry stored in dbm for [ENSG00000213468.7] WARNING, no entry stored in dbm for [ENSG00000224596.8] WARNING, no entry stored in dbm for [ENSG00000231188.1] WARNING, no entry stored in dbm for [ENSG00000243069.8] WARNING, no entry stored in dbm for [ENSG00000256902.1] WARNING, no entry stored in dbm for [ENSG00000266522.1] WARNING, no entry stored in dbm for [ENSG00000224905.7] WARNING, no entry stored in dbm for [ENSG00000187172.15] WARNING, no entry stored in dbm for [ENSG00000248736.3] WARNING, no entry stored in dbm for [ENSG00000230006.7] WARNING, no entry stored in dbm for [ENSG00000230006.7] WARNING, no entry stored in dbm for [ENSG00000266931.2] WARNING, no entry stored in dbm for [ENSG00000237094.12] WARNING, no entry stored in dbm for [ENSG00000273599.1] WARNING, no entry stored in dbm for [ENSG00000230021.10] WARNING, no entry stored in dbm for [ENSG00000230021.10] WARNING, no entry stored in dbm for [ENSG00000241860.7] WARNING, no entry stored in dbm for [ENSG00000235749.3] WARNING, no entry stored in dbm for [ENSG00000282772.1] WARNING, no entry stored in dbm for [ENSG00000280113.2] WARNING, no entry stored in dbm for [ENSG00000259723.1] WARNING, no entry stored in dbm for [ENSG00000250979.1] WARNING, no entry stored in dbm for [ENSG00000278390.5] WARNING, no entry stored in dbm for [ENSG00000286842.1] WARNING, no entry stored in dbm for [ENSG00000272906.1] WARNING, no entry stored in dbm for [ENSG00000287330.1] WARNING, no entry stored in dbm for [ENSG00000216360.1] WARNING, no entry stored in dbm for [ENSG00000287913.1] WARNING, no entry stored in dbm for [ENSG00000213598.4] WARNING, no entry stored in dbm for [ENSG00000288543.1] WARNING, no entry stored in dbm for [ENSG00000268257.2] WARNING, no entry stored in dbm for [ENSG00000265018.6] WARNING, no entry stored in dbm for [ENSG00000205791.3] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000261273.1] WARNING, no entry stored in dbm for [ENSG00000260413.1] WARNING, no entry stored in dbm for [ENSG00000214135.8] WARNING, no entry stored in dbm for [ENSG00000235126.1] WARNING, no entry stored in dbm for [ENSG00000284610.1] WARNING, no entry stored in dbm for [ENSG00000250159.7] WARNING, no entry stored in dbm for [ENSG00000259692.6] WARNING, no entry stored in dbm for [ENSG00000250979.1] WARNING, no entry stored in dbm for [ENSG00000259692.6] WARNING, no entry stored in dbm for [ENSG00000250979.1] WARNING, no entry stored in dbm for [ENSG00000241593.5] WARNING, no entry stored in dbm for [ENSG00000249675.1] WARNING, no entry stored in dbm for [ENSG00000251378.1] WARNING, no entry stored in dbm for [ENSG00000287883.1] WARNING, no entry stored in dbm for [ENSG00000266208.1] WARNING, no entry stored in dbm for [ENSG00000284669.1] WARNING, no entry stored in dbm for [ENSG00000234686.1] WARNING, no entry stored in dbm for [ENSG00000264151.6] WARNING, no entry stored in dbm for [ENSG00000280828.1] WARNING, no entry stored in dbm for [ENSG00000286380.1] WARNING, no entry stored in dbm for [ENSG00000268120.1] WARNING, no entry stored in dbm for [ENSG00000286380.1] WARNING, no entry stored in dbm for [ENSG00000268120.1] WARNING, no entry stored in dbm for [ENSG00000274565.1] WARNING, no entry stored in dbm for [ENSG00000249258.2] WARNING, no entry stored in dbm for [ENSG00000249142.1] WARNING, no entry stored in dbm for [ENSG00000274124.1] WARNING, no entry stored in dbm for [ENSG00000251313.1] WARNING, no entry stored in dbm for [ENSG00000250938.6] WARNING, no entry stored in dbm for [ENSG00000254859.1] WARNING, no entry stored in dbm for [ENSG00000280331.1] WARNING, no entry stored in dbm for [ENSG00000251066.1] WARNING, no entry stored in dbm for [ENSG00000258916.2] WARNING, no entry stored in dbm for [ENSG00000251066.1] WARNING, no entry stored in dbm for [ENSG00000251066.1] WARNING, no entry stored in dbm for [ENSG00000251066.1] WARNING, no entry stored in dbm for [ENSG00000251066.1] WARNING, no entry stored in dbm for [ENSG00000248755.1] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000274021.1] WARNING, no entry stored in dbm for [ENSG00000224722.3] WARNING, no entry stored in dbm for [ENSG00000213963.6] WARNING, no entry stored in dbm for [ENSG00000227544.10] WARNING, no entry stored in dbm for [ENSG00000261329.6] WARNING, no entry stored in dbm for [ENSG00000257696.1] WARNING, no entry stored in dbm for [ENSG00000256615.1] WARNING, no entry stored in dbm for [ENSG00000286247.1] WARNING, no entry stored in dbm for [ENSG00000284671.1] WARNING, no entry stored in dbm for [ENSG00000257022.1] WARNING, no entry stored in dbm for [ENSG00000270453.1] WARNING, no entry stored in dbm for [ENSG00000233891.8] WARNING, no entry stored in dbm for [ENSG00000283132.1] WARNING, no entry stored in dbm for [ENSG00000286376.1] WARNING, no entry stored in dbm for [ENSG00000229180.7] WARNING, no entry stored in dbm for [ENSG00000229180.7] WARNING, no entry stored in dbm for [ENSG00000229180.7] WARNING, no entry stored in dbm for [ENSG00000226824.7] WARNING, no entry stored in dbm for [ENSG00000266869.2] WARNING, no entry stored in dbm for [ENSG00000250979.1] WARNING, no entry stored in dbm for [ENSG00000267623.3] WARNING, no entry stored in dbm for [ENSG00000228434.1] WARNING, no entry stored in dbm for [ENSG00000254610.3] WARNING, no entry stored in dbm for [ENSG00000241278.1] WARNING, no entry stored in dbm for [ENSG00000228204.2] WARNING, no entry stored in dbm for [ENSG00000280177.1] WARNING, no entry stored in dbm for [ENSG00000268812.3] WARNING, no entry stored in dbm for [ENSG00000251595.7] WARNING, no entry stored in dbm for [ENSG00000235823.3] WARNING, no entry stored in dbm for [ENSG00000253507.5] WARNING, no entry stored in dbm for [ENSG00000254297.1] * STAR-Fusion complete. See output: /tmp/nxf.3bujw4M4f8/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)