File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1b/ee04f42955d0b0eb521474ea3567c0/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 10:20:10
                             Started mapping on |	Jun 08 10:26:32
                                    Finished on |	Jun 08 11:18:30
       Mapping speed, Million of reads per hour |	309.06

                          Number of input reads |	267676046
                      Average input read length |	206
                                    UNIQUE READS:
                   Uniquely mapped reads number |	253960879
                        Uniquely mapped reads % |	94.88%
                          Average mapped length |	205.12
                       Number of splices: Total |	211962057
            Number of splices: Annotated (sjdb) |	208867083
                       Number of splices: GT/AG |	209539662
                       Number of splices: GC/AG |	1132440
                       Number of splices: AT/AC |	122011
               Number of splices: Non-canonical |	1167944
                      Mismatch rate per base, % |	0.26%
                         Deletion rate per base |	0.03%
                        Deletion average length |	1.94
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.56
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	8880798
             % of reads mapped to multiple loci |	3.32%
        Number of reads mapped to too many loci |	480026
             % of reads mapped to too many loci |	0.18%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	3786307
                 % of reads unmapped: too short |	1.41%
                Number of reads unmapped: other |	568036
                     % of reads unmapped: other |	0.21%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%