-ctat genome lib [/tmp/nxf.0pBbwFxmsW/ctat_genome_lib_build_dir] validates.
CMD: mkdir -p /tmp/nxf.0pBbwFxmsW/./_starF_checkpoints
CMD: mkdir -p /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary
-sample contains 295383588 rnaseq fragments
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes  --genome_lib_dir /tmp/nxf.0pBbwFxmsW/ctat_genome_lib_build_dir  -J /tmp/nxf.0pBbwFxmsW/1173_CRL_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction  -O /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 
-parsing fusion evidence: /tmp/nxf.0pBbwFxmsW/1173_CRL_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction
-building interval tree based on /tmp/nxf.0pBbwFxmsW/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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-building interval tree based on /tmp/nxf.0pBbwFxmsW/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

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[3200000], rate=45017.58/min 
[3210000], rate=45021.04/min 
[3220000], rate=45034.97/min -building interval tree based on /tmp/nxf.0pBbwFxmsW/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=25000.00/min 
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[30000], rate=28571.43/min 
[40000], rate=29629.63/min 
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[3200000], rate=39008.53/min 
[3210000], rate=39082.79/min 
[3220000], rate=39148.94/min -building interval tree based on /tmp/nxf.0pBbwFxmsW/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu
-done building interval tree (0.08 min).
-mapping reads to genes

[10000], rate=46153.85/min 
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[30000], rate=38297.87/min 
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[1580000], rate=24862.31/min 
[1590000], rate=24967.29/min 
[1600000], rate=25071.82/min 
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[1900000], rate=27351.25/min 
[1910000], rate=27435.96/min 
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[1940000], rate=27694.50/min 
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[3200000], rate=34940.86/min 
[3210000], rate=35011.82/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads  -J /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt  --genome_lib_dir /tmp/nxf.0pBbwFxmsW/ctat_genome_lib_build_dir  --filt_file /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail  -M 50  > /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass 
-parsing /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info.

 0.00 reads per min processed...  
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 4000000.00 reads per min processed...  
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 4078125.00 reads per min processed...  
done.

* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict  -J /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass  -O /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion 
-parsing fusion evidence: /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass
-outputting fusion candidates to file: /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary
* Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter  --fusion_preds /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary  -J /tmp/nxf.0pBbwFxmsW/1173_CRL_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction  --tmpdir /tmp  --min_junction_reads 0  --min_sum_frags 1  --require_LDAS 0  --max_promiscuity 10  --min_pct_dom_promiscuity 20  --min_novel_junction_support 1  --min_alt_pct_junction 10  --aggregate_novel_junction_dist 5  --min_spanning_frags_only 1  --genome_lib_dir /tmp/nxf.0pBbwFxmsW/ctat_genome_lib_build_dir  --out_prefix /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion
CMD: mkdir -p /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir
EM: Starting log likelihood: -6052338.695875
EM: Round [1] log likelihood: -6051561.783218
EM: Round [2] log likelihood: -6051328.829997
EM: Round [3] log likelihood: -6051226.169290
EM: Round [4] log likelihood: -6051172.491303
EM: Round [5] log likelihood: -6051141.522038
EM: Round [6] log likelihood: -6051122.321584
EM: Round [7] log likelihood: -6051109.680906
EM: Round [8] log likelihood: -6051100.917463
EM: Round [9] log likelihood: -6051094.568843
EM: Round [10] log likelihood: -6051089.797073
EM: Round [11] log likelihood: -6051086.099196
EM: Round [12] log likelihood: -6051083.160035
EM: Round [13] log likelihood: -6051080.774140
EM: Round [14] log likelihood: -6051078.802767
EM: Round [15] log likelihood: -6051077.149237
EM: Round [16] log likelihood: -6051075.744317
EM: Round [17] log likelihood: -6051074.537234
EM: Round [18] log likelihood: -6051073.489971
EM: Round [19] log likelihood: -6051072.573544
EM: Round [20] log likelihood: -6051071.765493
EM: Round [21] log likelihood: -6051071.048167
EM: Round [22] log likelihood: -6051070.407516
EM: Round [23] log likelihood: -6051069.832221
EM: Round [24] log likelihood: -6051069.313071
EM: Round [25] log likelihood: -6051068.842497
EM: Round [26] log likelihood: -6051068.414219
EM: Round [27] log likelihood: -6051068.022993
EM: Round [28] log likelihood: -6051067.664397
EM: Round [29] log likelihood: -6051067.334685
EM: Round [30] log likelihood: -6051067.030658
EM: Round [31] log likelihood: -6051066.749569
EM: Round [32] log likelihood: -6051066.489048
EM: Round [33] log likelihood: -6051066.247035
EM: Round [34] log likelihood: -6051066.021738
EM: Round [35] log likelihood: -6051065.811585
EM: Round [36] log likelihood: -6051065.615193
EM: Round [37] log likelihood: -6051065.431341
EM: Round [38] log likelihood: -6051065.258947
EM: Round [39] log likelihood: -6051065.097049
EM: Round [40] log likelihood: -6051064.944788
EM: Round [41] log likelihood: -6051064.801393
EM: Round [42] log likelihood: -6051064.666175
EM: Round [43] log likelihood: -6051064.538512
EM: Round [44] log likelihood: -6051064.417841
EM: Round [45] log likelihood: -6051064.303654
EM: Round [46] log likelihood: -6051064.195491
EM: Round [47] log likelihood: -6051064.092930
EM: Round [48] log likelihood: -6051063.995589
EM: Round [49] log likelihood: -6051063.903120
EM: Round [50] log likelihood: -6051063.815202
EM: Round [51] log likelihood: -6051063.731541
EM: Round [52] log likelihood: -6051063.651869
EM: Round [53] log likelihood: -6051063.575938
EM: Round [54] log likelihood: -6051063.503518
EM: Round [55] log likelihood: -6051063.434399
EM: Round [56] log likelihood: -6051063.368385
EM: Round [57] log likelihood: -6051063.305296
EM: Round [58] log likelihood: -6051063.244965
EM: Round [59] log likelihood: -6051063.187236
EM: Round [60] log likelihood: -6051063.131964
EM: Round [61] log likelihood: -6051063.079015
EM: Round [62] log likelihood: -6051063.028263
EM: Round [63] log likelihood: -6051062.979591
EM: Round [64] log likelihood: -6051062.932890
EM: Round [65] log likelihood: -6051062.888058
EM: Round [66] log likelihood: -6051062.845000
EM: Round [67] log likelihood: -6051062.803625
EM: Round [68] log likelihood: -6051062.763851
EM: Round [69] log likelihood: -6051062.725597
EM: Round [70] log likelihood: -6051062.688790
EM: Round [71] log likelihood: -6051062.653361
EM: Round [72] log likelihood: -6051062.619244
EM: Round [73] log likelihood: -6051062.586377
EM: Round [74] log likelihood: -6051062.554703
EM: Round [75] log likelihood: -6051062.524167
EM: Round [76] log likelihood: -6051062.494717
EM: Round [77] log likelihood: -6051062.466304
EM: Round [78] log likelihood: -6051062.438883
EM: Round [79] log likelihood: -6051062.412409
EM: Round [80] log likelihood: -6051062.386842
EM: Round [81] log likelihood: -6051062.362143
EM: Round [82] log likelihood: -6051062.338274
EM: Round [83] log likelihood: -6051062.315201
EM: Round [84] log likelihood: -6051062.292890
EM: Round [85] log likelihood: -6051062.271311
EM: Round [86] log likelihood: -6051062.250432
EM: Round [87] log likelihood: -6051062.230226
EM: Round [88] log likelihood: -6051062.210665
EM: Round [89] log likelihood: -6051062.191725
EM: Round [90] log likelihood: -6051062.173380
EM: Round [91] log likelihood: -6051062.155607
EM: Round [92] log likelihood: -6051062.138384
EM: Round [93] log likelihood: -6051062.121691
EM: Round [94] log likelihood: -6051062.105506
EM: Round [95] log likelihood: -6051062.089812
EM: Round [96] log likelihood: -6051062.074588
EM: Round [97] log likelihood: -6051062.059819
EM: Round [98] log likelihood: -6051062.045488
EM: Round [99] log likelihood: -6051062.031577
EM: Round [100] log likelihood: -6051062.018074
EM: Round [101] log likelihood: -6051062.004962
EM: Round [102] log likelihood: -6051061.992227
EM: Round [103] log likelihood: -6051061.979858
EM: Round [104] log likelihood: -6051061.967840
EM: Round [105] log likelihood: -6051061.956162
EM: Round [106] log likelihood: -6051061.944812
EM: Round [107] log likelihood: -6051061.933779
EM: Round [108] log likelihood: -6051061.923052
EM: Round [109] log likelihood: -6051061.912621
EM: Round [110] log likelihood: -6051061.902476
EM: Round [111] log likelihood: -6051061.892608
EM: Round [112] log likelihood: -6051061.883007
EM: Round [113] log likelihood: -6051061.873664
EM: Round [114] log likelihood: -6051061.864572
EM: Round [115] log likelihood: -6051061.855723
EM: Round [116] log likelihood: -6051061.847108
EM: Round [117] log likelihood: -6051061.838720
EM: Round [118] log likelihood: -6051061.830553
EM: Round [119] log likelihood: -6051061.822598
EM: Round [120] log likelihood: -6051061.814850
EM: Round [121] log likelihood: -6051061.807303
EM: Round [122] log likelihood: -6051061.799949
EM: Round [123] log likelihood: -6051061.792784
EM: Round [124] log likelihood: -6051061.785801
EM: Round [125] log likelihood: -6051061.778995
EM: Round [126] log likelihood: -6051061.772361
EM: Round [127] log likelihood: -6051061.765894
EM: Round [128] log likelihood: -6051061.759588
EM: Round [129] log likelihood: -6051061.753440
EM: Round [130] log likelihood: -6051061.747444
EM: Round [131] log likelihood: -6051061.741595
EM: Round [132] log likelihood: -6051061.735891
EM: Round [133] log likelihood: -6051061.730327
EM: Round [134] log likelihood: -6051061.724898
EM: Round [135] log likelihood: -6051061.719601
EM: Round [136] log likelihood: -6051061.714432
EM: Round [137] log likelihood: -6051061.709388
EM: Round [138] log likelihood: -6051061.704465
EM: Round [139] log likelihood: -6051061.699660
EM: Round [140] log likelihood: -6051061.694969
EM: Round [141] log likelihood: -6051061.690390
EM: Round [142] log likelihood: -6051061.685919
EM: Round [143] log likelihood: -6051061.681553
EM: Round [144] log likelihood: -6051061.677290
EM: Round [145] log likelihood: -6051061.673127
EM: Round [146] log likelihood: -6051061.669062
EM: Round [147] log likelihood: -6051061.665091
EM: Round [148] log likelihood: -6051061.661212
EM: Round [149] log likelihood: -6051061.657422
EM: Round [150] log likelihood: -6051061.653720
EM: Round [151] log likelihood: -6051061.650104
EM: Round [152] log likelihood: -6051061.646570
EM: Round [153] log likelihood: -6051061.643117
EM: Round [154] log likelihood: -6051061.639742
EM: Round [155] log likelihood: -6051061.636444
EM: Round [156] log likelihood: -6051061.633221
EM: Round [157] log likelihood: -6051061.630071
EM: Round [158] log likelihood: -6051061.626991
EM: Round [159] log likelihood: -6051061.623981
EM: Round [160] log likelihood: -6051061.621038
EM: Round [161] log likelihood: -6051061.618161
EM: Round [162] log likelihood: -6051061.615349
EM: Round [163] log likelihood: -6051061.612598
EM: Round [164] log likelihood: -6051061.609909
EM: Round [165] log likelihood: -6051061.607280
EM: Round [166] log likelihood: -6051061.604708
EM: Round [167] log likelihood: -6051061.602193
EM: Round [168] log likelihood: -6051061.599733
EM: Round [169] log likelihood: -6051061.597327
EM: Round [170] log likelihood: -6051061.594974
EM: Round [171] log likelihood: -6051061.592672
EM: Round [172] log likelihood: -6051061.590421
EM: Round [173] log likelihood: -6051061.588218
EM: Round [174] log likelihood: -6051061.586063
EM: Round [175] log likelihood: -6051061.583954
EM: Round [176] log likelihood: -6051061.581892
EM: Round [177] log likelihood: -6051061.579873
EM: Round [178] log likelihood: -6051061.577898
EM: Round [179] log likelihood: -6051061.575966
EM: Round [180] log likelihood: -6051061.574075
EM: Round [181] log likelihood: -6051061.572224
EM: Round [182] log likelihood: -6051061.570413
EM: Round [183] log likelihood: -6051061.568640
EM: Round [184] log likelihood: -6051061.566906
EM: Round [185] log likelihood: -6051061.565208
EM: Round [186] log likelihood: -6051061.563546
EM: Round [187] log likelihood: -6051061.561919
EM: Round [188] log likelihood: -6051061.560326
EM: Round [189] log likelihood: -6051061.558768
EM: Round [190] log likelihood: -6051061.557242
EM: Round [191] log likelihood: -6051061.555748
EM: Round [192] log likelihood: -6051061.554285
EM: Round [193] log likelihood: -6051061.552853
EM: Round [194] log likelihood: -6051061.551451
EM: Round [195] log likelihood: -6051061.550078
EM: Round [196] log likelihood: -6051061.548734
EM: Round [197] log likelihood: -6051061.547418
EM: Round [198] log likelihood: -6051061.546130
EM: Round [199] log likelihood: -6051061.544868
EM: Round [200] log likelihood: -6051061.543632
EM: Round [201] log likelihood: -6051061.542422
EM: Round [202] log likelihood: -6051061.541237
EM: Round [203] log likelihood: -6051061.540076
EM: Round [204] log likelihood: -6051061.538940
EM: Round [205] log likelihood: -6051061.537826
EM: Round [206] log likelihood: -6051061.536736
EM: Round [207] log likelihood: -6051061.535668
EM: Round [208] log likelihood: -6051061.534622
EM: Round [209] log likelihood: -6051061.533598
EM: Round [210] log likelihood: -6051061.532594
EM: Round [211] log likelihood: -6051061.531611
EM: Round [212] log likelihood: -6051061.530648
EM: Round [213] log likelihood: -6051061.529705
EM: Round [214] log likelihood: -6051061.528781
EM: Round [215] log likelihood: -6051061.527875
EM: Round [216] log likelihood: -6051061.526989
EM: Round [217] log likelihood: -6051061.526120
EM: Round [218] log likelihood: -6051061.525268
EM: Round [219] log likelihood: -6051061.524435
EM: Round [220] log likelihood: -6051061.523617
EM: Round [221] log likelihood: -6051061.522817
EM: Round [222] log likelihood: -6051061.522033
EM: Round [223] log likelihood: -6051061.521264
EM: Round [224] log likelihood: -6051061.520511
EM: Round [225] log likelihood: -6051061.519773
EM: Round [226] log likelihood: -6051061.519050
EM: Round [227] log likelihood: -6051061.518342
EM: Round [228] log likelihood: -6051061.517648
EM: Round [229] log likelihood: -6051061.516967
EM: Round [230] log likelihood: -6051061.516301
EM: Round [231] log likelihood: -6051061.515647
EM: Round [232] log likelihood: -6051061.515007
EM: Round [233] log likelihood: -6051061.514380
EM: Round [234] log likelihood: -6051061.513765
EM: Round [235] log likelihood: -6051061.513162
EM: Round [236] log likelihood: -6051061.512572
EM: Round [237] log likelihood: -6051061.511993
EM: Round [238] log likelihood: -6051061.511426
EM: Round [239] log likelihood: -6051061.510870
EM: Round [240] log likelihood: -6051061.510325
EM: Round [241] log likelihood: -6051061.509791
EM: Round [242] log likelihood: -6051061.509268
EM: Round [243] log likelihood: -6051061.508755
EM: Round [244] log likelihood: -6051061.508252
EM: Round [245] log likelihood: -6051061.507759
EM: Round [246] log likelihood: -6051061.507276
EM: Round [247] log likelihood: -6051061.506802
EM: Round [248] log likelihood: -6051061.506338
EM: Round [249] log likelihood: -6051061.505883
EM: Round [250] log likelihood: -6051061.505437
EM: Round [251] log likelihood: -6051061.504999
EM: Round [252] log likelihood: -6051061.504571
EM: Round [253] log likelihood: -6051061.504151
EM: Round [254] log likelihood: -6051061.503739
EM: Round [255] log likelihood: -6051061.503335
EM: Round [256] log likelihood: -6051061.502939
EM: Round [257] log likelihood: -6051061.502551
EM: Round [258] log likelihood: -6051061.502170
EM: Round [259] log likelihood: -6051061.501797
EM: Round [260] log likelihood: -6051061.501432
EM: Round [261] log likelihood: -6051061.501073
EM: Round [262] log likelihood: -6051061.500722
EM: Round [263] log likelihood: -6051061.500377
EM: Round [264] log likelihood: -6051061.500039
EM: Round [265] log likelihood: -6051061.499708
EM: Round [266] log likelihood: -6051061.499383
EM: Round [267] log likelihood: -6051061.499065
EM: Round [268] log likelihood: -6051061.498753
EM: Round [269] log likelihood: -6051061.498447
EM: Round [270] log likelihood: -6051061.498146
EM: Round [271] log likelihood: -6051061.497852
EM: Round [272] log likelihood: -6051061.497564
EM: Round [273] log likelihood: -6051061.497281
EM: Round [274] log likelihood: -6051061.497003
EM: Round [275] log likelihood: -6051061.496731
EM: Round [276] log likelihood: -6051061.496465
EM: Round [277] log likelihood: -6051061.496203
EM: Round [278] log likelihood: -6051061.495947
EM: Round [279] log likelihood: -6051061.495695
EM: Round [280] log likelihood: -6051061.495449
EM: Round [281] log likelihood: -6051061.495207
EM: Round [282] log likelihood: -6051061.494970
EM: Round [283] log likelihood: -6051061.494737
EM: Round [284] log likelihood: -6051061.494509
EM: Round [285] log likelihood: -6051061.494286
EM: Round [286] log likelihood: -6051061.494066
EM: Round [287] log likelihood: -6051061.493851
EM: Round [288] log likelihood: -6051061.493641
EM: Round [289] log likelihood: -6051061.493434
EM: Round [290] log likelihood: -6051061.493231
EM: Round [291] log likelihood: -6051061.493032
EM: Round [292] log likelihood: -6051061.492837
EM: Round [293] log likelihood: -6051061.492646
EM: Round [294] log likelihood: -6051061.492458
EM: Round [295] log likelihood: -6051061.492275
EM: Round [296] log likelihood: -6051061.492094
EM: Round [297] log likelihood: -6051061.491917
EM: Round [298] log likelihood: -6051061.491744
EM: Round [299] log likelihood: -6051061.491574
EM: Round [300] log likelihood: -6051061.491407
EM: Round [301] log likelihood: -6051061.491243
EM: Round [302] log likelihood: -6051061.491083
EM: Round [303] log likelihood: -6051061.490925
EM: Round [304] log likelihood: -6051061.490771
EM: Round [305] log likelihood: -6051061.490619
EM: Round [306] log likelihood: -6051061.490471
EM: Round [307] log likelihood: -6051061.490325
EM: Round [308] log likelihood: -6051061.490182
EM: Round [309] log likelihood: -6051061.490042
EM: Round [310] log likelihood: -6051061.489905
EM: Round [311] log likelihood: -6051061.489770
EM: Round [312] log likelihood: -6051061.489638
EM: Round [313] log likelihood: -6051061.489508
EM: Round [314] log likelihood: -6051061.489381
EM: Round [315] log likelihood: -6051061.489256
EM: Round [316] log likelihood: -6051061.489134
EM: Round [317] log likelihood: -6051061.489014
EM: Round [318] log likelihood: -6051061.488896
EM: Round [319] log likelihood: -6051061.488781
EM: Round [320] log likelihood: -6051061.488667
EM: Round [321] log likelihood: -6051061.488556
EM: Round [322] log likelihood: -6051061.488447
EM: Round [323] log likelihood: -6051061.488340
EM: Round [324] log likelihood: -6051061.488236
EM: Round [325] log likelihood: -6051061.488133
EM: Round [326] log likelihood: -6051061.488032
EM: Round [327] log likelihood: -6051061.487933
EM: Stopping iterations at round 327 due to insufficient improvement in likelihood.
EM: Starting log likelihood: -6043345.605489
EM: Round [1] log likelihood: -6042826.889780
EM: Round [2] log likelihood: -6042675.983964
EM: Round [3] log likelihood: -6042612.487980
EM: Round [4] log likelihood: -6042580.588894
EM: Round [5] log likelihood: -6042562.799357
EM: Round [6] log likelihood: -6042552.092378
EM: Round [7] log likelihood: -6042545.226507
EM: Round [8] log likelihood: -6042540.576305
EM: Round [9] log likelihood: -6042537.275848
EM: Round [10] log likelihood: -6042534.839151
EM: Round [11] log likelihood: -6042532.980056
EM: Round [12] log likelihood: -6042531.522416
EM: Round [13] log likelihood: -6042530.353299
EM: Round [14] log likelihood: -6042529.397594
EM: Round [15] log likelihood: -6042528.603679
EM: Round [16] log likelihood: -6042527.935044
EM: Round [17] log likelihood: -6042527.365203
EM: Round [18] log likelihood: -6042526.874518
EM: Round [19] log likelihood: -6042526.448140
EM: Round [20] log likelihood: -6042526.074650
EM: Round [21] log likelihood: -6042525.745135
EM: Round [22] log likelihood: -6042525.452537
EM: Round [23] log likelihood: -6042525.191206
EM: Round [24] log likelihood: -6042524.956562
EM: Round [25] log likelihood: -6042524.744861
EM: Round [26] log likelihood: -6042524.553009
EM: Round [27] log likelihood: -6042524.378432
EM: Round [28] log likelihood: -6042524.218972
EM: Round [29] log likelihood: -6042524.072804
EM: Round [30] log likelihood: -6042523.938380
EM: Round [31] log likelihood: -6042523.814374
EM: Round [32] log likelihood: -6042523.699647
EM: Round [33] log likelihood: -6042523.593217
EM: Round [34] log likelihood: -6042523.494231
EM: Round [35] log likelihood: -6042523.401944
EM: Round [36] log likelihood: -6042523.315707
EM: Round [37] log likelihood: -6042523.234949
EM: Round [38] log likelihood: -6042523.159167
EM: Round [39] log likelihood: -6042523.087914
EM: Round [40] log likelihood: -6042523.020798
EM: Round [41] log likelihood: -6042522.957467
EM: Round [42] log likelihood: -6042522.897608
EM: Round [43] log likelihood: -6042522.840940
EM: Round [44] log likelihood: -6042522.787213
EM: Round [45] log likelihood: -6042522.736201
EM: Round [46] log likelihood: -6042522.687701
EM: Round [47] log likelihood: -6042522.641527
EM: Round [48] log likelihood: -6042522.597515
EM: Round [49] log likelihood: -6042522.555514
EM: Round [50] log likelihood: -6042522.515386
EM: Round [51] log likelihood: -6042522.477006
EM: Round [52] log likelihood: -6042522.440260
EM: Round [53] log likelihood: -6042522.405045
EM: Round [54] log likelihood: -6042522.371265
EM: Round [55] log likelihood: -6042522.338833
EM: Round [56] log likelihood: -6042522.307667
EM: Round [57] log likelihood: -6042522.277696
EM: Round [58] log likelihood: -6042522.248849
EM: Round [59] log likelihood: -6042522.221064
EM: Round [60] log likelihood: -6042522.194284
EM: Round [61] log likelihood: -6042522.168454
EM: Round [62] log likelihood: -6042522.143524
EM: Round [63] log likelihood: -6042522.119449
EM: Round [64] log likelihood: -6042522.096184
EM: Round [65] log likelihood: -6042522.073691
EM: Round [66] log likelihood: -6042522.051931
EM: Round [67] log likelihood: -6042522.030870
EM: Round [68] log likelihood: -6042522.010475
EM: Round [69] log likelihood: -6042521.990716
EM: Round [70] log likelihood: -6042521.971564
EM: Round [71] log likelihood: -6042521.952993
EM: Round [72] log likelihood: -6042521.934978
EM: Round [73] log likelihood: -6042521.917494
EM: Round [74] log likelihood: -6042521.900520
EM: Round [75] log likelihood: -6042521.884034
EM: Round [76] log likelihood: -6042521.868018
EM: Round [77] log likelihood: -6042521.852452
EM: Round [78] log likelihood: -6042521.837320
EM: Round [79] log likelihood: -6042521.822603
EM: Round [80] log likelihood: -6042521.808288
EM: Round [81] log likelihood: -6042521.794358
EM: Round [82] log likelihood: -6042521.780800
EM: Round [83] log likelihood: -6042521.767600
EM: Round [84] log likelihood: -6042521.754746
EM: Round [85] log likelihood: -6042521.742226
EM: Round [86] log likelihood: -6042521.730028
EM: Round [87] log likelihood: -6042521.718141
EM: Round [88] log likelihood: -6042521.706555
EM: Round [89] log likelihood: -6042521.695260
EM: Round [90] log likelihood: -6042521.684246
EM: Round [91] log likelihood: -6042521.673505
EM: Round [92] log likelihood: -6042521.663027
EM: Round [93] log likelihood: -6042521.652805
EM: Round [94] log likelihood: -6042521.642830
EM: Round [95] log likelihood: -6042521.633095
EM: Round [96] log likelihood: -6042521.623593
EM: Round [97] log likelihood: -6042521.614317
EM: Round [98] log likelihood: -6042521.605260
EM: Round [99] log likelihood: -6042521.596416
EM: Round [100] log likelihood: -6042521.587778
EM: Round [101] log likelihood: -6042521.579340
EM: Round [102] log likelihood: -6042521.571098
EM: Round [103] log likelihood: -6042521.563045
EM: Round [104] log likelihood: -6042521.555176
EM: Round [105] log likelihood: -6042521.547486
EM: Round [106] log likelihood: -6042521.539971
EM: Round [107] log likelihood: -6042521.532625
EM: Round [108] log likelihood: -6042521.525444
EM: Round [109] log likelihood: -6042521.518423
EM: Round [110] log likelihood: -6042521.511559
EM: Round [111] log likelihood: -6042521.504847
EM: Round [112] log likelihood: -6042521.498283
EM: Round [113] log likelihood: -6042521.491864
EM: Round [114] log likelihood: -6042521.485585
EM: Round [115] log likelihood: -6042521.479444
EM: Round [116] log likelihood: -6042521.473436
EM: Round [117] log likelihood: -6042521.467559
EM: Round [118] log likelihood: -6042521.461809
EM: Round [119] log likelihood: -6042521.456183
EM: Round [120] log likelihood: -6042521.450678
EM: Round [121] log likelihood: -6042521.445290
EM: Round [122] log likelihood: -6042521.440018
EM: Round [123] log likelihood: -6042521.434859
EM: Round [124] log likelihood: -6042521.429808
EM: Round [125] log likelihood: -6042521.424865
EM: Round [126] log likelihood: -6042521.420027
EM: Round [127] log likelihood: -6042521.415290
EM: Round [128] log likelihood: -6042521.410653
EM: Round [129] log likelihood: -6042521.406113
EM: Round [130] log likelihood: -6042521.401669
EM: Round [131] log likelihood: -6042521.397317
EM: Round [132] log likelihood: -6042521.393056
EM: Round [133] log likelihood: -6042521.388883
EM: Round [134] log likelihood: -6042521.384797
EM: Round [135] log likelihood: -6042521.380796
EM: Round [136] log likelihood: -6042521.376877
EM: Round [137] log likelihood: -6042521.373039
EM: Round [138] log likelihood: -6042521.369280
EM: Round [139] log likelihood: -6042521.365598
EM: Round [140] log likelihood: -6042521.361992
EM: Round [141] log likelihood: -6042521.358460
EM: Round [142] log likelihood: -6042521.355000
EM: Round [143] log likelihood: -6042521.351610
EM: Round [144] log likelihood: -6042521.348290
EM: Round [145] log likelihood: -6042521.345037
EM: Round [146] log likelihood: -6042521.341850
EM: Round [147] log likelihood: -6042521.338728
EM: Round [148] log likelihood: -6042521.335669
EM: Round [149] log likelihood: -6042521.332672
EM: Round [150] log likelihood: -6042521.329735
EM: Round [151] log likelihood: -6042521.326858
EM: Round [152] log likelihood: -6042521.324039
EM: Round [153] log likelihood: -6042521.321276
EM: Round [154] log likelihood: -6042521.318569
EM: Round [155] log likelihood: -6042521.315916
EM: Round [156] log likelihood: -6042521.313316
EM: Round [157] log likelihood: -6042521.310768
EM: Round [158] log likelihood: -6042521.308271
EM: Round [159] log likelihood: -6042521.305824
EM: Round [160] log likelihood: -6042521.303426
EM: Round [161] log likelihood: -6042521.301075
EM: Round [162] log likelihood: -6042521.298772
EM: Round [163] log likelihood: -6042521.296514
EM: Round [164] log likelihood: -6042521.294301
EM: Round [165] log likelihood: -6042521.292131
EM: Round [166] log likelihood: -6042521.290005
EM: Round [167] log likelihood: -6042521.287921
EM: Round [168] log likelihood: -6042521.285878
EM: Round [169] log likelihood: -6042521.283876
EM: Round [170] log likelihood: -6042521.281913
EM: Round [171] log likelihood: -6042521.279989
EM: Round [172] log likelihood: -6042521.278102
EM: Round [173] log likelihood: -6042521.276253
EM: Round [174] log likelihood: -6042521.274440
EM: Round [175] log likelihood: -6042521.272663
EM: Round [176] log likelihood: -6042521.270921
EM: Round [177] log likelihood: -6042521.269213
EM: Round [178] log likelihood: -6042521.267538
EM: Round [179] log likelihood: -6042521.265897
EM: Round [180] log likelihood: -6042521.264287
EM: Round [181] log likelihood: -6042521.262709
EM: Round [182] log likelihood: -6042521.261162
EM: Round [183] log likelihood: -6042521.259645
EM: Round [184] log likelihood: -6042521.258158
EM: Round [185] log likelihood: -6042521.256699
EM: Round [186] log likelihood: -6042521.255269
EM: Round [187] log likelihood: -6042521.253867
EM: Round [188] log likelihood: -6042521.252493
EM: Round [189] log likelihood: -6042521.251145
EM: Round [190] log likelihood: -6042521.249823
EM: Round [191] log likelihood: -6042521.248527
EM: Round [192] log likelihood: -6042521.247257
EM: Round [193] log likelihood: -6042521.246010
EM: Round [194] log likelihood: -6042521.244789
EM: Round [195] log likelihood: -6042521.243590
EM: Round [196] log likelihood: -6042521.242415
EM: Round [197] log likelihood: -6042521.241263
EM: Round [198] log likelihood: -6042521.240133
EM: Round [199] log likelihood: -6042521.239025
EM: Round [200] log likelihood: -6042521.237939
EM: Round [201] log likelihood: -6042521.236873
EM: Round [202] log likelihood: -6042521.235828
EM: Round [203] log likelihood: -6042521.234804
EM: Round [204] log likelihood: -6042521.233799
EM: Round [205] log likelihood: -6042521.232813
EM: Round [206] log likelihood: -6042521.231847
EM: Round [207] log likelihood: -6042521.230899
EM: Round [208] log likelihood: -6042521.229969
EM: Round [209] log likelihood: -6042521.229058
EM: Round [210] log likelihood: -6042521.228164
EM: Round [211] log likelihood: -6042521.227287
EM: Round [212] log likelihood: -6042521.226427
EM: Round [213] log likelihood: -6042521.225583
EM: Round [214] log likelihood: -6042521.224756
EM: Round [215] log likelihood: -6042521.223945
EM: Round [216] log likelihood: -6042521.223149
EM: Round [217] log likelihood: -6042521.222369
EM: Round [218] log likelihood: -6042521.221603
EM: Round [219] log likelihood: -6042521.220852
EM: Round [220] log likelihood: -6042521.220116
EM: Round [221] log likelihood: -6042521.219394
EM: Round [222] log likelihood: -6042521.218686
EM: Round [223] log likelihood: -6042521.217991
EM: Round [224] log likelihood: -6042521.217309
EM: Round [225] log likelihood: -6042521.216641
EM: Round [226] log likelihood: -6042521.215986
EM: Round [227] log likelihood: -6042521.215343
EM: Round [228] log likelihood: -6042521.214712
EM: Round [229] log likelihood: -6042521.214093
EM: Round [230] log likelihood: -6042521.213486
EM: Round [231] log likelihood: -6042521.212891
EM: Round [232] log likelihood: -6042521.212307
EM: Round [233] log likelihood: -6042521.211735
EM: Round [234] log likelihood: -6042521.211173
EM: Round [235] log likelihood: -6042521.210622
EM: Round [236] log likelihood: -6042521.210082
EM: Round [237] log likelihood: -6042521.209552
EM: Round [238] log likelihood: -6042521.209032
EM: Round [239] log likelihood: -6042521.208522
EM: Round [240] log likelihood: -6042521.208021
EM: Round [241] log likelihood: -6042521.207531
EM: Round [242] log likelihood: -6042521.207049
EM: Round [243] log likelihood: -6042521.206577
EM: Round [244] log likelihood: -6042521.206114
EM: Round [245] log likelihood: -6042521.205659
EM: Round [246] log likelihood: -6042521.205214
EM: Round [247] log likelihood: -6042521.204777
EM: Round [248] log likelihood: -6042521.204348
EM: Round [249] log likelihood: -6042521.203927
EM: Round [250] log likelihood: -6042521.203514
EM: Round [251] log likelihood: -6042521.203109
EM: Round [252] log likelihood: -6042521.202712
EM: Round [253] log likelihood: -6042521.202323
EM: Round [254] log likelihood: -6042521.201941
EM: Round [255] log likelihood: -6042521.201566
EM: Round [256] log likelihood: -6042521.201198
EM: Round [257] log likelihood: -6042521.200837
EM: Round [258] log likelihood: -6042521.200483
EM: Round [259] log likelihood: -6042521.200136
EM: Round [260] log likelihood: -6042521.199795
EM: Round [261] log likelihood: -6042521.199461
EM: Round [262] log likelihood: -6042521.199134
EM: Round [263] log likelihood: -6042521.198812
EM: Round [264] log likelihood: -6042521.198497
EM: Round [265] log likelihood: -6042521.198187
EM: Round [266] log likelihood: -6042521.197884
EM: Round [267] log likelihood: -6042521.197586
EM: Round [268] log likelihood: -6042521.197294
EM: Round [269] log likelihood: -6042521.197007
EM: Round [270] log likelihood: -6042521.196726
EM: Round [271] log likelihood: -6042521.196450
EM: Round [272] log likelihood: -6042521.196180
EM: Round [273] log likelihood: -6042521.195914
EM: Round [274] log likelihood: -6042521.195654
EM: Round [275] log likelihood: -6042521.195398
EM: Round [276] log likelihood: -6042521.195148
EM: Round [277] log likelihood: -6042521.194902
EM: Round [278] log likelihood: -6042521.194661
EM: Round [279] log likelihood: -6042521.194424
EM: Round [280] log likelihood: -6042521.194192
EM: Round [281] log likelihood: -6042521.193964
EM: Round [282] log likelihood: -6042521.193741
EM: Round [283] log likelihood: -6042521.193521
EM: Round [284] log likelihood: -6042521.193306
EM: Round [285] log likelihood: -6042521.193095
EM: Round [286] log likelihood: -6042521.192888
EM: Round [287] log likelihood: -6042521.192685
EM: Round [288] log likelihood: -6042521.192486
EM: Round [289] log likelihood: -6042521.192291
EM: Round [290] log likelihood: -6042521.192099
EM: Round [291] log likelihood: -6042521.191911
EM: Round [292] log likelihood: -6042521.191726
EM: Round [293] log likelihood: -6042521.191545
EM: Round [294] log likelihood: -6042521.191368
EM: Round [295] log likelihood: -6042521.191193
EM: Round [296] log likelihood: -6042521.191022
EM: Round [297] log likelihood: -6042521.190855
EM: Round [298] log likelihood: -6042521.190690
EM: Round [299] log likelihood: -6042521.190529
EM: Round [300] log likelihood: -6042521.190370
EM: Round [301] log likelihood: -6042521.190215
EM: Round [302] log likelihood: -6042521.190062
EM: Round [303] log likelihood: -6042521.189913
EM: Round [304] log likelihood: -6042521.189766
EM: Round [305] log likelihood: -6042521.189622
EM: Round [306] log likelihood: -6042521.189481
EM: Round [307] log likelihood: -6042521.189342
EM: Round [308] log likelihood: -6042521.189206
EM: Round [309] log likelihood: -6042521.189073
EM: Round [310] log likelihood: -6042521.188942
EM: Round [311] log likelihood: -6042521.188814
EM: Round [312] log likelihood: -6042521.188688
EM: Round [313] log likelihood: -6042521.188564
EM: Round [314] log likelihood: -6042521.188443
EM: Round [315] log likelihood: -6042521.188324
EM: Round [316] log likelihood: -6042521.188207
EM: Round [317] log likelihood: -6042521.188093
EM: Round [318] log likelihood: -6042521.187980
EM: Round [319] log likelihood: -6042521.187870
EM: Round [320] log likelihood: -6042521.187762
EM: Round [321] log likelihood: -6042521.187656
EM: Round [322] log likelihood: -6042521.187552
EM: Round [323] log likelihood: -6042521.187449
EM: Round [324] log likelihood: -6042521.187349
EM: Round [325] log likelihood: -6042521.187251
EM: Stopping iterations at round 325 due to insufficient improvement in likelihood.
CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20  --fusion_preds /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.0pBbwFxmsW/ctat_genome_lib_build_dir 
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.0pBbwFxmsW/ctat_genome_lib_build_dir
CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter  --genome_lib_dir /tmp/nxf.0pBbwFxmsW/ctat_genome_lib_build_dir  --max_promiscuity 10  --min_pct_dom_promiscuity 20 
CMD: cp /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter
CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged
CMD: ln -sf /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered
* Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 295383588 > /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM
* Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.0pBbwFxmsW/ctat_genome_lib_build_dir > /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.0pBbwFxmsW/ctat_genome_lib_build_dir --annotate /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot
* Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.0pBbwFxmsW/ctat_genome_lib_build_dir
-done, see /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.0pBbwFxmsW/ctat_genome_lib_build_dir
-filter_likely_RT_artifacts: (pass: 410, filtered: 2276)
* Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001
* Running CMD: cp /tmp/nxf.0pBbwFxmsW/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv
* Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv
* Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl  --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.0pBbwFxmsW/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000281103.2]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000255139.2]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000250251.6]
WARNING, no entry stored in dbm for [IGH.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGH-.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000232894.1]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000276758.1]
WARNING, no entry stored in dbm for [ENSG00000226049.3]
WARNING, no entry stored in dbm for [ENSG00000260404.3]
WARNING, no entry stored in dbm for [ENSG00000243753.5]
WARNING, no entry stored in dbm for [ENSG00000181126.13]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000272140.2]
WARNING, no entry stored in dbm for [ENSG00000205534.6]
WARNING, no entry stored in dbm for [ENSG00000254485.5]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000234715.2]
WARNING, no entry stored in dbm for [ENSG00000284977.2]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000282458.1]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000288549.1]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000180747.15]
WARNING, no entry stored in dbm for [IGL.g@-ext]
WARNING, no entry stored in dbm for [ENSG00000282057.1]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000224016.2]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000228463.10]
WARNING, no entry stored in dbm for [ENSG00000287411.1]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000225594.1]
WARNING, no entry stored in dbm for [ENSG00000229739.4]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000260727.2]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000214955.5]
WARNING, no entry stored in dbm for [ENSG00000270025.2]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000285799.1]
WARNING, no entry stored in dbm for [ENSG00000254741.1]
WARNING, no entry stored in dbm for [ENSG00000261499.2]
WARNING, no entry stored in dbm for [ENSG00000229930.1]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000278834.1]
WARNING, no entry stored in dbm for [ENSG00000250768.1]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000131484.4]
WARNING, no entry stored in dbm for [ENSG00000188002.10]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000267196.1]
WARNING, no entry stored in dbm for [ENSG00000215546.2]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000231317.1]
WARNING, no entry stored in dbm for [ENSG00000274712.2]
WARNING, no entry stored in dbm for [ENSG00000230116.1]
WARNING, no entry stored in dbm for [ENSG00000258454.1]
WARNING, no entry stored in dbm for [ENSG00000230006.7]
WARNING, no entry stored in dbm for [ENSG00000261011.1]
WARNING, no entry stored in dbm for [ENSG00000243289.1]
WARNING, no entry stored in dbm for [ENSG00000265936.1]
WARNING, no entry stored in dbm for [ENSG00000214259.3]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000242999.3]
WARNING, no entry stored in dbm for [ENSG00000218048.2]
WARNING, no entry stored in dbm for [ENSG00000241350.1]
WARNING, no entry stored in dbm for [ENSG00000286830.1]
WARNING, no entry stored in dbm for [ENSG00000249752.1]
WARNING, no entry stored in dbm for [ENSG00000229404.6]
WARNING, no entry stored in dbm for [ENSG00000251557.2]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000173295.8]
WARNING, no entry stored in dbm for [ENSG00000271977.1]
WARNING, no entry stored in dbm for [ENSG00000232973.13]
WARNING, no entry stored in dbm for [ENSG00000233379.2]
WARNING, no entry stored in dbm for [ENSG00000260126.2]
WARNING, no entry stored in dbm for [ENSG00000254681.6]
WARNING, no entry stored in dbm for [ENSG00000250159.7]
WARNING, no entry stored in dbm for [ENSG00000248406.1]
WARNING, no entry stored in dbm for [ENSG00000241656.1]
WARNING, no entry stored in dbm for [ENSG00000263563.6]
WARNING, no entry stored in dbm for [ENSG00000237296.9]
WARNING, no entry stored in dbm for [ENSG00000287882.1]
WARNING, no entry stored in dbm for [ENSG00000245694.10]
WARNING, no entry stored in dbm for [ENSG00000249267.7]
WARNING, no entry stored in dbm for [ENSG00000285219.2]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000215483.11]
WARNING, no entry stored in dbm for [ENSG00000241207.1]
WARNING, no entry stored in dbm for [ENSG00000158483.17]
WARNING, no entry stored in dbm for [ENSG00000236438.7]
WARNING, no entry stored in dbm for [ENSG00000251504.1]
WARNING, no entry stored in dbm for [ENSG00000287811.1]
WARNING, no entry stored in dbm for [ENSG00000271746.1]
WARNING, no entry stored in dbm for [ENSG00000233175.2]
WARNING, no entry stored in dbm for [ENSG00000288620.1]
WARNING, no entry stored in dbm for [ENSG00000187953.10]
WARNING, no entry stored in dbm for [ENSG00000266379.6]
WARNING, no entry stored in dbm for [ENSG00000267023.5]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000184319.16]
WARNING, no entry stored in dbm for [ENSG00000257403.2]
WARNING, no entry stored in dbm for [ENSG00000189149.12]
WARNING, no entry stored in dbm for [ENSG00000261596.2]
WARNING, no entry stored in dbm for [ENSG00000226045.1]
WARNING, no entry stored in dbm for [ENSG00000273328.5]
WARNING, no entry stored in dbm for [ENSG00000235415.1]
WARNING, no entry stored in dbm for [ENSG00000250802.7]
WARNING, no entry stored in dbm for [ENSG00000233448.2]
WARNING, no entry stored in dbm for [ENSG00000176728.10]
WARNING, no entry stored in dbm for [ENSG00000236130.2]
WARNING, no entry stored in dbm for [ENSG00000233708.1]
WARNING, no entry stored in dbm for [ENSG00000267432.6]
WARNING, no entry stored in dbm for [ENSG00000229867.2]
WARNING, no entry stored in dbm for [ENSG00000224043.8]
WARNING, no entry stored in dbm for [ENSG00000273151.1]
WARNING, no entry stored in dbm for [ENSG00000287516.1]
WARNING, no entry stored in dbm for [ENSG00000204860.5]
WARNING, no entry stored in dbm for [ENSG00000225891.2]
WARNING, no entry stored in dbm for [ENSG00000275805.1]
WARNING, no entry stored in dbm for [ENSG00000279078.1]
WARNING, no entry stored in dbm for [ENSG00000258704.6]
WARNING, no entry stored in dbm for [ENSG00000283537.2]
WARNING, no entry stored in dbm for [ENSG00000214439.4]
WARNING, no entry stored in dbm for [ENSG00000158482.10]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000238300.1]
WARNING, no entry stored in dbm for [ENSG00000207088.1]
WARNING, no entry stored in dbm for [ENSG00000287920.1]
WARNING, no entry stored in dbm for [ENSG00000275929.1]
WARNING, no entry stored in dbm for [ENSG00000197847.12]
WARNING, no entry stored in dbm for [ENSG00000267220.1]
WARNING, no entry stored in dbm for [ENSG00000283399.1]
WARNING, no entry stored in dbm for [ENSG00000267083.1]
WARNING, no entry stored in dbm for [ENSG00000240083.2]
WARNING, no entry stored in dbm for [ENSG00000237875.1]
WARNING, no entry stored in dbm for [ENSG00000228349.1]
WARNING, no entry stored in dbm for [ENSG00000243538.1]
WARNING, no entry stored in dbm for [ENSG00000251474.6]
WARNING, no entry stored in dbm for [ENSG00000242993.1]
WARNING, no entry stored in dbm for [ENSG00000223508.5]
WARNING, no entry stored in dbm for [ENSG00000200169.1]
WARNING, no entry stored in dbm for [ENSG00000267128.2]
WARNING, no entry stored in dbm for [ENSG00000256116.1]
WARNING, no entry stored in dbm for [ENSG00000243870.3]
WARNING, no entry stored in dbm for [ENSG00000250842.1]
WARNING, no entry stored in dbm for [ENSG00000228546.2]
WARNING, no entry stored in dbm for [ENSG00000250778.1]
WARNING, no entry stored in dbm for [ENSG00000224477.5]
WARNING, no entry stored in dbm for [ENSG00000245526.11]
WARNING, no entry stored in dbm for [ENSG00000244280.1]
WARNING, no entry stored in dbm for [ENSG00000223973.2]
WARNING, no entry stored in dbm for [ENSG00000264964.2]
WARNING, no entry stored in dbm for [ENSG00000266865.6]
WARNING, no entry stored in dbm for [ENSG00000226328.7]
WARNING, no entry stored in dbm for [ENSG00000271121.2]
WARNING, no entry stored in dbm for [ENSG00000274642.1]
WARNING, no entry stored in dbm for [ENSG00000198555.7]
WARNING, no entry stored in dbm for [ENSG00000248323.7]
WARNING, no entry stored in dbm for [ENSG00000266642.2]
WARNING, no entry stored in dbm for [ENSG00000228412.9]
WARNING, no entry stored in dbm for [ENSG00000251432.7]
WARNING, no entry stored in dbm for [ENSG00000235677.1]
WARNING, no entry stored in dbm for [ENSG00000232117.2]
WARNING, no entry stored in dbm for [ENSG00000232803.1]
WARNING, no entry stored in dbm for [ENSG00000226240.2]
WARNING, no entry stored in dbm for [ENSG00000225077.3]
WARNING, no entry stored in dbm for [ENSG00000239356.3]
WARNING, no entry stored in dbm for [ENSG00000231203.1]
WARNING, no entry stored in dbm for [ENSG00000233987.2]
WARNING, no entry stored in dbm for [ENSG00000270864.1]
WARNING, no entry stored in dbm for [ENSG00000261834.2]
WARNING, no entry stored in dbm for [ENSG00000255141.1]
WARNING, no entry stored in dbm for [ENSG00000227638.2]
WARNING, no entry stored in dbm for [ENSG00000234705.2]
WARNING, no entry stored in dbm for [ENSG00000261168.1]
WARNING, no entry stored in dbm for [ENSG00000260693.1]
WARNING, no entry stored in dbm for [ENSG00000241621.1]
WARNING, no entry stored in dbm for [ENSG00000254349.6]
WARNING, no entry stored in dbm for [ENSG00000224934.5]
WARNING, no entry stored in dbm for [ENSG00000280069.1]
WARNING, no entry stored in dbm for [ENSG00000286115.1]
WARNING, no entry stored in dbm for [ENSG00000239467.6]
WARNING, no entry stored in dbm for [ENSG00000228887.3]
WARNING, no entry stored in dbm for [ENSG00000229280.1]
WARNING, no entry stored in dbm for [ENSG00000205488.9]
WARNING, no entry stored in dbm for [ENSG00000225808.1]
WARNING, no entry stored in dbm for [ENSG00000231162.4]
WARNING, no entry stored in dbm for [ENSG00000227375.6]
WARNING, no entry stored in dbm for [ENSG00000178082.6]
WARNING, no entry stored in dbm for [ENSG00000250770.3]
WARNING, no entry stored in dbm for [ENSG00000267433.1]
WARNING, no entry stored in dbm for [ENSG00000186940.6]
WARNING, no entry stored in dbm for [ENSG00000236456.1]
WARNING, no entry stored in dbm for [ENSG00000154874.15]
WARNING, no entry stored in dbm for [ENSG00000262248.1]
WARNING, no entry stored in dbm for [ENSG00000237286.1]
WARNING, no entry stored in dbm for [ENSG00000259475.1]
WARNING, no entry stored in dbm for [ENSG00000227742.2]
WARNING, no entry stored in dbm for [ENSG00000248966.1]
WARNING, no entry stored in dbm for [ENSG00000227467.3]
WARNING, no entry stored in dbm for [ENSG00000286043.1]
WARNING, no entry stored in dbm for [ENSG00000287215.1]
WARNING, no entry stored in dbm for [ENSG00000249738.10]
WARNING, no entry stored in dbm for [ENSG00000267143.1]
WARNING, no entry stored in dbm for [ENSG00000203593.3]
WARNING, no entry stored in dbm for [ENSG00000236021.2]
WARNING, no entry stored in dbm for [ENSG00000235749.3]
WARNING, no entry stored in dbm for [ENSG00000236358.1]
WARNING, no entry stored in dbm for [ENSG00000277270.2]
WARNING, no entry stored in dbm for [ENSG00000277973.1]
WARNING, no entry stored in dbm for [ENSG00000261011.1]
WARNING, no entry stored in dbm for [ENSG00000271335.6]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000227486.2]
WARNING, no entry stored in dbm for [ENSG00000250917.1]
WARNING, no entry stored in dbm for [ENSG00000215162.2]
WARNING, no entry stored in dbm for [ENSG00000215022.7]
WARNING, no entry stored in dbm for [ENSG00000266865.6]
WARNING, no entry stored in dbm for [ENSG00000205696.4]
WARNING, no entry stored in dbm for [ENSG00000237343.1]
WARNING, no entry stored in dbm for [ENSG00000277406.2]
WARNING, no entry stored in dbm for [ENSG00000280136.2]
WARNING, no entry stored in dbm for [ENSG00000261444.1]
WARNING, no entry stored in dbm for [ENSG00000256804.1]
WARNING, no entry stored in dbm for [ENSG00000224464.2]
WARNING, no entry stored in dbm for [ENSG00000253166.2]
WARNING, no entry stored in dbm for [ENSG00000236722.1]
WARNING, no entry stored in dbm for [ENSG00000282375.1]
WARNING, no entry stored in dbm for [ENSG00000287129.1]
WARNING, no entry stored in dbm for [ENSG00000231646.6]
WARNING, no entry stored in dbm for [ENSG00000251378.1]
WARNING, no entry stored in dbm for [ENSG00000225356.3]
WARNING, no entry stored in dbm for [ENSG00000261235.1]
WARNING, no entry stored in dbm for [ENSG00000187185.4]
WARNING, no entry stored in dbm for [ENSG00000269956.2]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000131484.4]
WARNING, no entry stored in dbm for [ENSG00000267198.1]
WARNING, no entry stored in dbm for [ENSG00000131484.4]
WARNING, no entry stored in dbm for [ENSG00000259536.5]
WARNING, no entry stored in dbm for [ENSG00000272324.5]
WARNING, no entry stored in dbm for [ENSG00000266356.1]
WARNING, no entry stored in dbm for [ENSG00000235530.7]
WARNING, no entry stored in dbm for [ENSG00000286035.1]
WARNING, no entry stored in dbm for [ENSG00000279328.1]
WARNING, no entry stored in dbm for [ENSG00000232524.1]
WARNING, no entry stored in dbm for [ENSG00000267648.1]
WARNING, no entry stored in dbm for [ENSG00000287178.1]
WARNING, no entry stored in dbm for [ENSG00000260413.1]
WARNING, no entry stored in dbm for [ENSG00000257663.1]
WARNING, no entry stored in dbm for [ENSG00000279662.1]
WARNING, no entry stored in dbm for [ENSG00000255621.1]
WARNING, no entry stored in dbm for [ENSG00000279250.1]
WARNING, no entry stored in dbm for [ENSG00000258608.1]
WARNING, no entry stored in dbm for [ENSG00000213963.6]
WARNING, no entry stored in dbm for [ENSG00000269032.1]
WARNING, no entry stored in dbm for [ENSG00000184319.16]
WARNING, no entry stored in dbm for [ENSG00000258454.1]
WARNING, no entry stored in dbm for [ENSG00000253722.1]
WARNING, no entry stored in dbm for [ENSG00000232043.1]
WARNING, no entry stored in dbm for [ENSG00000278543.1]
WARNING, no entry stored in dbm for [ENSG00000234352.9]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000284649.1]
WARNING, no entry stored in dbm for [ENSG00000268889.1]
WARNING, no entry stored in dbm for [ENSG00000287859.1]
WARNING, no entry stored in dbm for [ENSG00000244161.1]
WARNING, no entry stored in dbm for [ENSG00000285704.1]
WARNING, no entry stored in dbm for [ENSG00000265206.5]


	* STAR-Fusion complete.  See output: /tmp/nxf.0pBbwFxmsW/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)