Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cd/bdc4921352889162615600ba02a314/1173_CRX_T1_RNA_SLD_01_A23T55JLT4_1.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9a/151d4549387eb61b6079b639f56d42/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9a/151d4549387eb61b6079b639f56d42/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory