File Info

Filename
fi_workdir/Log.final.out
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/dc427eb79239bd5125c1ca74fe1ba8/fi_workdir/Log.final.out
Size
2.0 KB
Attempt
                                 Started job on |	Jun 08 08:24:07
                             Started mapping on |	Jun 08 08:30:43
                                    Finished on |	Jun 08 08:51:39
       Mapping speed, Million of reads per hour |	301.30

                          Number of input reads |	105119483
                      Average input read length |	208
                                    UNIQUE READS:
                   Uniquely mapped reads number |	100075651
                        Uniquely mapped reads % |	95.20%
                          Average mapped length |	207.62
                       Number of splices: Total |	73385734
            Number of splices: Annotated (sjdb) |	72395786
                       Number of splices: GT/AG |	72582259
                       Number of splices: GC/AG |	488849
                       Number of splices: AT/AC |	54325
               Number of splices: Non-canonical |	260301
                      Mismatch rate per base, % |	0.44%
                         Deletion rate per base |	0.02%
                        Deletion average length |	2.01
                        Insertion rate per base |	0.00%
                       Insertion average length |	1.57
                             MULTI-MAPPING READS:
        Number of reads mapped to multiple loci |	3543346
             % of reads mapped to multiple loci |	3.37%
        Number of reads mapped to too many loci |	214091
             % of reads mapped to too many loci |	0.20%
                                  UNMAPPED READS:
  Number of reads unmapped: too many mismatches |	0
       % of reads unmapped: too many mismatches |	0.00%
            Number of reads unmapped: too short |	1131310
                 % of reads unmapped: too short |	1.08%
                Number of reads unmapped: other |	155085
                     % of reads unmapped: other |	0.15%
                                  CHIMERIC READS:
                       Number of chimeric reads |	0
                            % of chimeric reads |	0.00%