NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (1173_NWE_T1_RNA_SLD_01_A23T55JLT4_2) - dev_rna_exp0016-73d51683 - Workflow Tracker

Runs
dev_rna_exp0016-73d51683
Tasks
GATK4_MARKDUPLICATES (1173_NWE_T1_RNA_SLD_01_A23T55JLT4_2)

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Task Info

Status: succeeded
Hash: a0b1261956a5
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: 1173_NWE_T1_RNA_SLD_01_A23T55JLT4_2
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 2c/cc3c82
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/cc3c820be3a87c5acabdf9128695fc
Native ID: nf-2ccc3c820be3a87c5acabdf9128695fc-66013

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 95.7 GB / 148.0 GB
Process I/O (rchar / wchar): 53.9 GB / 35.0 GB
Disk I/O (read / write): - / 35.0 GB
Host: i-0cc1462497c022d30 ( on-demand)

Runtime

Submitted: Jun 08, 2026 2:37:41 AM
Completed: Jun 08, 2026 3:26:04 AM
Total Duration: 48m 22s

Phases

Queue: 33s
Execution: 45m 39s
Stage/Unstage: 2m 10s

Attempt 1

Execution

Status: failed
Hash: 27/626747
Failure Reason: spot eviction ()
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/626747e050feb52dfc6b8af338efdb
Native ID: nf-27626747e050feb52dfc6b8af338efdb-74052

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 74.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-0865ab098237db95a ( spot)

Runtime

Submitted: Jun 08, 2026 2:01:35 AM
Completed: Jun 08, 2026 2:37:40 AM
Total Duration: 36m 4s

Phases

Queue: 36m 4s
Execution: -
Stage/Unstage: -