-ctat genome lib [/tmp/nxf.ytuUpZ3bhu/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.ytuUpZ3bhu/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary -sample contains 292772921 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.ytuUpZ3bhu/ctat_genome_lib_build_dir -J /tmp/nxf.ytuUpZ3bhu/1173_LV7_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction -O /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.ytuUpZ3bhu/1173_LV7_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction -building interval tree based on /tmp/nxf.ytuUpZ3bhu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.05 min). -mapping reads to genes [10000], rate=42857.14/min [20000], rate=44444.44/min [30000], rate=46153.85/min [40000], rate=45283.02/min [50000], rate=46153.85/min [60000], rate=45569.62/min [70000], rate=46153.85/min [80000], rate=46153.85/min [90000], rate=46551.72/min [100000], rate=46511.63/min [110000], rate=46478.87/min [120000], rate=46753.25/min [130000], rate=46987.95/min [140000], rate=47191.01/min [150000], rate=47368.42/min [160000], rate=47761.19/min [170000], rate=47887.32/min [180000], rate=47787.61/min [190000], rate=47698.74/min [200000], rate=47808.76/min [210000], rate=47908.75/min [220000], rate=47482.01/min [230000], rate=47422.68/min [240000], rate=47368.42/min [250000], rate=47468.35/min [260000], rate=47416.41/min [270000], rate=47368.42/min [280000], rate=47323.94/min [290000], rate=47540.98/min [300000], rate=47493.40/min [310000], rate=47692.31/min [320000], rate=47761.19/min [330000], rate=47941.89/min [340000], rate=48113.21/min [350000], rate=48275.86/min [360000], rate=48430.49/min [370000], rate=48577.68/min [380000], rate=48822.27/min [390000], rate=48953.97/min [400000], rate=49079.75/min [410000], rate=49397.59/min [420000], rate=49606.30/min [430000], rate=49710.98/min [440000], rate=49811.32/min [450000], rate=50092.76/min [460000], rate=50364.96/min [470000], rate=50537.63/min [480000], rate=50793.65/min [490000], rate=51130.43/min [500000], rate=51457.98/min [510000], rate=51689.19/min [520000], rate=51741.29/min [530000], rate=51960.78/min [540000], rate=52258.06/min [550000], rate=52297.94/min [560000], rate=52418.10/min [570000], rate=52696.46/min [580000], rate=52968.04/min [590000], rate=53233.08/min [600000], rate=53651.27/min [610000], rate=54062.04/min [620000], rate=54306.57/min [630000], rate=54703.33/min [640000], rate=54468.09/min [650000], rate=53278.69/min [660000], rate=52450.33/min [670000], rate=51604.62/min [680000], rate=51127.82/min [690000], rate=50735.29/min [700000], rate=50420.17/min [710000], rate=50117.65/min [720000], rate=49769.59/min [730000], rate=48993.29/min [740000], rate=48418.76/min [750000], rate=47468.35/min [760000], rate=47302.90/min [770000], rate=47094.80/min [780000], rate=46800.00/min [790000], rate=46289.06/min [800000], rate=46065.26/min [810000], rate=45633.80/min [820000], rate=45096.24/min [830000], rate=45027.12/min [840000], rate=44760.21/min [850000], rate=44619.42/min [860000], rate=44368.01/min [870000], rate=43976.41/min [880000], rate=43600.33/min [890000], rate=43064.52/min [900000], rate=42620.36/min [910000], rate=42260.06/min [920000], rate=41849.89/min [930000], rate=41517.86/min [940000], rate=41228.07/min [950000], rate=40977.71/min [960000], rate=40735.50/min [970000], rate=40557.49/min [980000], rate=40356.90/min [990000], rate=40053.94/min [1000000], rate=39840.64/min [1010000], rate=39581.97/min [1020000], rate=39331.62/min [1030000], rate=39089.18/min [1040000], rate=38830.12/min [1050000], rate=38602.94/min [1060000], rate=38405.80/min [1070000], rate=38237.05/min [1080000], rate=38072.86/min [1090000], rate=37913.04/min [1100000], rate=37822.35/min [1110000], rate=37691.00/min [1120000], rate=37604.92/min [1130000], rate=37479.27/min [1140000], rate=37336.24/min [1150000], rate=37418.66/min [1160000], rate=37560.71/min [1170000], rate=37681.16/min [1180000], rate=37840.73/min [1190000], rate=37978.72/min [1200000], rate=38115.40/min [1210000], rate=38270.95/min [1220000], rate=38425.20/min [1230000], rate=38598.33/min [1240000], rate=38750.00/min [1250000], rate=38920.60/min [1260000], rate=39089.97/min [1270000], rate=39258.11/min [1280000], rate=39404.82/min [1290000], rate=39570.55/min [1300000], rate=39735.10/min [1310000], rate=39878.23/min [1320000], rate=40000.00/min [1330000], rate=40161.05/min [1340000], rate=40320.96/min [1350000], rate=40479.76/min [1360000], rate=40617.22/min [1370000], rate=40733.40/min [1380000], rate=40828.40/min [1390000], rate=40962.67/min [1400000], rate=41095.89/min [1410000], rate=41248.17/min [1420000], rate=41379.31/min [1430000], rate=41529.53/min [1440000], rate=41658.63/min [1450000], rate=41806.82/min [1460000], rate=41954.02/min [1470000], rate=42100.24/min [1480000], rate=42225.39/min [1490000], rate=42369.67/min [1500000], rate=42492.92/min [1510000], rate=42635.29/min [1520000], rate=42776.74/min [1530000], rate=42897.20/min [1540000], rate=42896.94/min [1550000], rate=42817.68/min [1560000], rate=42739.73/min [1570000], rate=42663.04/min [1580000], rate=42606.74/min [1590000], rate=42418.85/min [1600000], rate=42216.36/min [1610000], rate=41836.29/min [1620000], rate=41414.57/min [1630000], rate=41057.93/min [1640000], rate=40762.22/min [1650000], rate=40523.95/min [1660000], rate=40258.69/min [1670000], rate=40096.04/min [1680000], rate=40175.37/min [1690000], rate=40254.07/min [1700000], rate=40157.48/min [1710000], rate=40031.21/min [1720000], rate=40124.42/min [1730000], rate=40201.39/min [1740000], rate=40293.32/min [1750000], rate=40384.62/min [1760000], rate=40475.28/min [1770000], rate=40580.82/min [1780000], rate=40670.22/min [1790000], rate=40774.49/min [1800000], rate=40878.12/min [1810000], rate=40981.13/min [1820000], rate=41083.52/min [1830000], rate=41185.30/min [1840000], rate=41271.03/min [1850000], rate=41310.01/min [1860000], rate=41410.02/min [1870000], rate=41509.43/min [1880000], rate=41623.62/min [1890000], rate=41721.85/min [1900000], rate=41834.86/min [1910000], rate=41931.94/min [1920000], rate=42043.80/min [1930000], rate=42155.08/min [1940000], rate=42250.45/min [1950000], rate=42329.96/min [1960000], rate=42302.16/min [1970000], rate=42244.46/min [1980000], rate=42292.63/min [1990000], rate=42280.45/min [2000000], rate=42253.52/min [2010000], rate=42182.58/min [2020000], rate=42171.19/min [2030000], rate=42262.32/min [2040000], rate=42382.27/min [2050000], rate=42516.42/min [2060000], rate=42650.10/min [2070000], rate=42753.87/min [2080000], rate=42842.43/min [2090000], rate=42959.92/min [2100000], rate=43018.09/min [2110000], rate=43090.54/min [2120000], rate=43147.90/min [2130000], rate=43219.48/min [2140000], rate=43378.38/min [2150000], rate=43507.59/min [2160000], rate=43592.33/min [2170000], rate=43691.28/min [2180000], rate=43804.42/min [2190000], rate=43902.44/min [2200000], rate=43970.69/min [2210000], rate=44038.53/min [2220000], rate=44091.36/min [2230000], rate=44246.03/min [2240000], rate=44327.18/min [2250000], rate=44422.51/min [2260000], rate=44429.88/min [2270000], rate=44408.22/min [2280000], rate=44343.60/min [2290000], rate=44379.84/min [2300000], rate=44358.73/min [2310000], rate=44380.40/min [2320000], rate=44345.33/min [2330000], rate=44296.58/min [2340000], rate=44262.30/min [2350000], rate=44339.62/min [2360000], rate=44333.12/min [2370000], rate=44257.70/min [2380000], rate=44169.50/min [2390000], rate=44095.94/min [2400000], rate=43808.94/min [2410000], rate=43978.10/min [2420000], rate=44080.15/min [2430000], rate=44088.30/min [2440000], rate=44056.58/min [2450000], rate=43893.70/min [2460000], rate=43785.23/min [2470000], rate=43833.19/min [2480000], rate=43803.36/min [2490000], rate=43786.64/min [2500000], rate=43808.41/min [2510000], rate=43817.28/min [2520000], rate=43826.09/min [2530000], rate=43796.88/min [2540000], rate=43730.27/min [2550000], rate=43726.78/min [2560000], rate=43698.44/min [2570000], rate=43608.60/min [2580000], rate=43568.82/min [2590000], rate=43627.18/min [2600000], rate=43697.48/min [2610000], rate=43779.70/min [2620000], rate=43849.37/min [2630000], rate=43918.73/min [2640000], rate=44000.00/min [2650000], rate=44068.74/min [2660000], rate=44137.17/min [2670000], rate=44229.71/min [2680000], rate=44321.94/min [2690000], rate=44389.44/min [2700000], rate=44481.05/min [2710000], rate=44572.37/min -building interval tree based on /tmp/nxf.ytuUpZ3bhu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.05 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=85714.29/min [30000], rate=72000.00/min [40000], rate=64864.86/min [50000], rate=62500.00/min [60000], rate=60000.00/min [70000], rate=59154.93/min [80000], rate=58536.59/min [90000], rate=58064.52/min [100000], rate=57692.31/min [110000], rate=57894.74/min [120000], rate=58064.52/min [130000], rate=58208.96/min [140000], rate=58333.33/min [150000], rate=58441.56/min [160000], rate=58895.71/min [170000], rate=59302.33/min [180000], rate=59668.51/min [190000], rate=60317.46/min [200000], rate=60606.06/min [210000], rate=61463.41/min [220000], rate=61971.83/min [230000], rate=62727.27/min [240000], rate=62882.10/min [250000], rate=63559.32/min [260000], rate=64197.53/min [270000], rate=64800.00/min [280000], rate=65116.28/min [290000], rate=65660.38/min [300000], rate=65217.39/min [310000], rate=63698.63/min [320000], rate=61538.46/min [330000], rate=59818.73/min [340000], rate=58285.71/min [350000], rate=56910.57/min [360000], rate=55526.99/min [370000], rate=53883.50/min [380000], rate=52777.78/min [390000], rate=51884.70/min [400000], rate=51391.86/min [410000], rate=50513.35/min [420000], rate=49508.84/min [430000], rate=48587.57/min [440000], rate=47739.60/min [450000], rate=47120.42/min [460000], rate=46543.00/min [470000], rate=46003.26/min [480000], rate=45714.29/min [490000], rate=45370.37/min [500000], rate=44709.39/min [510000], rate=44541.48/min [520000], rate=44444.44/min [530000], rate=44351.46/min [540000], rate=44021.74/min [550000], rate=43650.79/min [560000], rate=43187.66/min [570000], rate=43127.36/min [580000], rate=43122.68/min [590000], rate=43118.15/min [600000], rate=43113.77/min [610000], rate=43058.82/min [620000], rate=43105.45/min [630000], rate=42376.68/min [640000], rate=41784.55/min [650000], rate=41755.89/min [660000], rate=41728.13/min [670000], rate=41831.43/min [680000], rate=41932.17/min [690000], rate=42073.17/min [700000], rate=41791.04/min [710000], rate=41970.44/min [720000], rate=41779.50/min [730000], rate=41754.05/min [740000], rate=41965.97/min [750000], rate=42174.32/min [760000], rate=42261.35/min [770000], rate=41772.15/min [780000], rate=41897.94/min [790000], rate=42095.91/min [800000], rate=42328.04/min [810000], rate=42187.50/min [820000], rate=42413.79/min [830000], rate=42600.51/min [840000], rate=42784.38/min [850000], rate=42394.01/min [860000], rate=42019.54/min [870000], rate=41494.44/min [880000], rate=41153.55/min [890000], rate=40701.22/min [900000], rate=40328.60/min [910000], rate=40176.60/min [920000], rate=40409.96/min [930000], rate=40640.93/min [940000], rate=40869.57/min [950000], rate=40772.53/min [960000], rate=40649.26/min [970000], rate=40585.77/min [980000], rate=40523.78/min [990000], rate=40463.22/min [1000000], rate=40431.27/min [1010000], rate=40373.08/min [1020000], rate=39637.31/min [1030000], rate=39438.42/min [1040000], rate=39493.67/min [1050000], rate=39130.43/min [1060000], rate=38639.13/min [1070000], rate=38237.05/min [1080000], rate=37652.53/min [1090000], rate=37159.09/min [1100000], rate=37183.10/min [1110000], rate=37061.77/min [1120000], rate=36821.92/min [1130000], rate=36867.86/min [1140000], rate=36913.11/min [1150000], rate=36957.69/min [1160000], rate=37021.28/min [1170000], rate=36947.37/min [1180000], rate=36457.26/min [1190000], rate=36133.60/min [1200000], rate=36199.10/min [1210000], rate=36245.63/min [1220000], rate=36327.54/min [1230000], rate=36390.53/min [1240000], rate=36488.47/min [1250000], rate=36567.53/min [1260000], rate=36681.22/min [1270000], rate=36599.42/min [1280000], rate=36554.02/min [1290000], rate=36647.73/min [1300000], rate=36757.78/min [1310000], rate=36780.53/min [1320000], rate=36700.65/min [1330000], rate=36791.15/min [1340000], rate=36897.66/min [1350000], rate=37003.20/min [1360000], rate=37107.78/min [1370000], rate=37228.26/min [1380000], rate=37347.77/min [1390000], rate=37466.31/min [1400000], rate=37634.41/min [1410000], rate=37751.00/min [1420000], rate=37883.50/min [1430000], rate=37998.23/min [1440000], rate=38145.70/min [1450000], rate=38275.41/min [1460000], rate=38404.21/min [1470000], rate=38364.51/min [1480000], rate=38209.98/min [1490000], rate=38107.42/min [1500000], rate=38038.88/min [1510000], rate=38195.62/min [1520000], rate=38335.44/min [1530000], rate=38474.43/min [1540000], rate=38564.27/min [1550000], rate=38525.27/min [1560000], rate=38502.67/min [1570000], rate=38480.39/min [1580000], rate=38396.11/min [1590000], rate=38328.65/min [1600000], rate=38308.06/min [1610000], rate=38302.93/min [1620000], rate=38132.60/min [1630000], rate=37485.63/min [1640000], rate=37076.11/min [1650000], rate=36680.25/min [1660000], rate=36205.02/min [1670000], rate=36082.10/min [1680000], rate=36116.09/min [1690000], rate=36136.85/min [1700000], rate=36170.21/min [1710000], rate=36203.25/min [1720000], rate=36223.24/min [1730000], rate=36255.68/min [1740000], rate=36074.64/min [1750000], rate=35836.18/min [1760000], rate=35591.51/min [1770000], rate=35364.64/min [1780000], rate=35154.71/min [1790000], rate=34960.94/min [1800000], rate=34771.41/min [1810000], rate=34552.97/min [1820000], rate=34307.26/min [1830000], rate=34258.97/min [1840000], rate=34328.36/min [1850000], rate=34375.97/min [1860000], rate=34423.20/min [1870000], rate=34470.05/min [1880000], rate=34527.09/min [1890000], rate=34583.71/min [1900000], rate=34639.93/min [1910000], rate=34695.73/min [1920000], rate=34751.13/min [1930000], rate=34806.13/min [1940000], rate=34881.63/min [1950000], rate=34946.24/min [1960000], rate=35020.85/min [1970000], rate=35115.86/min [1980000], rate=35200.00/min [1990000], rate=35273.26/min [2000000], rate=35346.10/min [2010000], rate=35418.50/min [2020000], rate=35500.88/min [2030000], rate=35562.04/min [2040000], rate=35643.56/min [2050000], rate=35714.29/min [2060000], rate=35794.96/min [2070000], rate=35885.58/min [2080000], rate=35965.42/min [2090000], rate=36055.20/min [2100000], rate=36134.21/min [2110000], rate=36223.18/min [2120000], rate=36342.86/min [2130000], rate=36317.14/min [2140000], rate=36404.88/min [2150000], rate=36492.22/min [2160000], rate=36589.50/min [2170000], rate=36686.39/min [2180000], rate=36782.90/min [2190000], rate=36868.69/min [2200000], rate=36954.09/min [2210000], rate=37049.46/min [2220000], rate=37144.45/min [2230000], rate=37218.36/min [2240000], rate=36953.53/min [2250000], rate=36684.78/min [2260000], rate=36432.03/min [2270000], rate=36378.21/min [2280000], rate=36382.98/min [2290000], rate=36397.35/min [2300000], rate=36421.22/min [2310000], rate=36444.91/min [2320000], rate=36477.99/min [2330000], rate=36510.84/min [2340000], rate=36533.96/min [2350000], rate=36566.39/min [2360000], rate=36589.15/min [2370000], rate=36621.17/min [2380000], rate=36671.80/min [2390000], rate=36712.75/min [2400000], rate=36762.83/min [2410000], rate=36812.63/min [2420000], rate=36871.51/min [2430000], rate=36920.74/min [2440000], rate=36979.04/min [2450000], rate=37046.37/min [2460000], rate=37104.07/min [2470000], rate=37170.81/min [2480000], rate=37237.24/min [2490000], rate=37294.06/min [2500000], rate=37369.21/min [2510000], rate=37434.75/min [2520000], rate=37509.30/min [2530000], rate=37592.87/min [2540000], rate=37685.46/min [2550000], rate=37777.78/min [2560000], rate=37869.82/min [2570000], rate=37961.60/min [2580000], rate=38053.10/min [2590000], rate=38144.33/min [2600000], rate=38235.29/min [2610000], rate=38325.99/min [2620000], rate=38416.42/min [2630000], rate=38506.59/min [2640000], rate=38587.09/min [2650000], rate=38676.72/min [2660000], rate=38756.68/min [2670000], rate=38836.36/min [2680000], rate=38906.36/min [2690000], rate=38985.51/min [2700000], rate=39064.38/min [2710000], rate=39133.57/min -building interval tree based on /tmp/nxf.ytuUpZ3bhu/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.05 min). -mapping reads to genes [10000], rate=120000.00/min [20000], rate=120000.00/min [30000], rate=112500.00/min [40000], rate=109090.91/min [50000], rate=107142.86/min [60000], rate=105882.35/min [70000], rate=100000.00/min [80000], rate=96000.00/min [90000], 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rate=23322.54/min [1690000], rate=23374.83/min [1700000], rate=23437.50/min [1710000], rate=23499.77/min [1720000], rate=23561.64/min [1730000], rate=23628.50/min [1740000], rate=23700.34/min [1750000], rate=23761.03/min [1760000], rate=23826.71/min [1770000], rate=23892.01/min [1780000], rate=23956.93/min [1790000], rate=24026.85/min [1800000], rate=24096.39/min [1810000], rate=24165.55/min [1820000], rate=24239.73/min [1830000], rate=24313.55/min [1840000], rate=24387.01/min [1850000], rate=24460.11/min [1860000], rate=24538.26/min [1870000], rate=24616.06/min [1880000], rate=24693.52/min [1890000], rate=24770.64/min [1900000], rate=24847.43/min [1910000], rate=24934.73/min [1920000], rate=25016.29/min [1930000], rate=25092.09/min [1940000], rate=25178.46/min [1950000], rate=25253.62/min [1960000], rate=25333.91/min [1970000], rate=25413.89/min [1980000], rate=25493.56/min [1990000], rate=25572.93/min [2000000], rate=25657.47/min [2010000], rate=25736.24/min [2020000], rate=25825.70/min [2030000], rate=25909.38/min [2040000], rate=25992.78/min [2050000], rate=26070.37/min [2060000], rate=26153.20/min [2070000], rate=26230.20/min [2080000], rate=26318.01/min [2090000], rate=26400.00/min [2100000], rate=26487.28/min [2110000], rate=26568.73/min [2120000], rate=26655.49/min [2130000], rate=26736.40/min [2140000], rate=26789.07/min [2150000], rate=26835.86/min [2160000], rate=26887.97/min [2170000], rate=26939.79/min [2180000], rate=26996.90/min [2190000], rate=27053.74/min [2200000], rate=27115.86/min [2210000], rate=27177.70/min [2220000], rate=27239.26/min [2230000], rate=27306.12/min [2240000], rate=27372.71/min [2250000], rate=27433.45/min [2260000], rate=27493.92/min [2270000], rate=27542.97/min [2280000], rate=27608.48/min [2290000], rate=27679.29/min [2300000], rate=27749.85/min [2310000], rate=27820.15/min [2320000], rate=27890.20/min [2330000], rate=27960.00/min [2340000], rate=28023.95/min [2350000], rate=28087.65/min [2360000], rate=28162.29/min [2370000], rate=28231.09/min [2380000], rate=28299.64/min [2390000], rate=28373.57/min [2400000], rate=28447.25/min [2410000], rate=28515.09/min [2420000], rate=28588.30/min [2430000], rate=28661.29/min [2440000], rate=28734.05/min [2450000], rate=28806.58/min [2460000], rate=28884.54/min [2470000], rate=28962.28/min [2480000], rate=29034.15/min [2490000], rate=29111.46/min [2500000], rate=29188.56/min [2510000], rate=29265.45/min [2520000], rate=29336.44/min [2530000], rate=29407.21/min [2540000], rate=29489.16/min [2550000], rate=29565.22/min [2560000], rate=29646.79/min [2570000], rate=29728.17/min [2580000], rate=29803.62/min [2590000], rate=29884.62/min [2600000], rate=29942.42/min [2610000], rate=29982.77/min [2620000], rate=30017.19/min [2630000], rate=30051.42/min [2640000], rate=30085.47/min [2650000], rate=30119.34/min [2660000], rate=30158.73/min [2670000], rate=30192.24/min [2680000], rate=30231.25/min [2690000],7/min [2720000], rate=33844.88/min [2730000], rate=33863.97/min [2740000], rate=33882.93/min [2750000], rate=33908.75/min [2760000], rate=33941.38/min [2770000], rate=33966.89/min [2780000], rate=34013.05/min [2790000], rate=34038.23/min [2800000], rate=34077.08/min [2810000], rate=34108.84/min [2820000], rate=34147.33/min [2830000], rate=34185.63/min [2840000], rate=34230.61/min [2850000], rate=34268.54/min [2860000], rate=34313.14/min [2870000], rate=34357.54/min [2880000], rate=34394.90/min [2890000], rate=34438.93/min [2900000], rate=34489.59/min [2910000], rate=34533.23/min [2920000], rate=34576.67/min [2930000], rate=34626.75/min [2940000], rate=34676.63/min [2950000], rate=34726.31/min [2960000], rate=34775.80/min [2970000], rate=34825.09/min [2980000], rate=34874.20/min [2990000], rate=34936.71/min [3000000], rate=34992.22/min [3010000], rate=35047.55/min [3020000], rate=35102.67/min [3030000], rate=35157.61/min [3040000], rate=35212.36/min [3050000], rate=35266.91/min [3060000], rate=35321.28/min [3070000], rate=35368.66/min [3080000], rate=35429.45/min [3090000], rate=35490.05/min [3100000], rate=35550.46/min [3110000], rate=35610.69/min [3120000], rate=35657.14/min [3130000], rate=35710.21/min [3140000], rate=35763.10/min [3150000], rate=35809.02/min [3160000], rate=35854.77/min [3170000], rate=35907.12/min [3180000], rate=35959.29/min [3190000], rate=36004.51/min [3200000], rate=36036.04/min [3210000], rate=36080.93/min [3220000], rate=36132.41/min [3230000], rate=36183.72/min [3240000], rate=36234.86/min [3250000], rate=36292.57/min [3260000], rate=36350.12/min [3270000], rate=36407.50/min [3280000], rate=36464.70/min [3290000], rate=36521.74/min [3300000], rate=36585.37/min [3310000], rate=36648.83/min [3320000], rate=36705.36/min [3330000], rate=36768.49/min [3340000], rate=36831.46/min [3350000], rate=36894.27/min [3360000], rate=36956.92/min [3370000], rate=37019.41/min [3380000], rate=37088.51/min [3390000], rate=37150.68/min [3400000], rate=37219.49/min [3410000], rate=37288.14/min [3420000], rate=37349.84/min [3430000], rate=37418.18/min [3440000], rate=37479.57/min [3450000], rate=37547.61/min [3460000], rate=37601.88/min [3470000], rate=37656.00/min [3480000], rate=37709.95/min [3490000], rate=37770.56/min [3500000], rate=37824.21/min [3510000], rate=37891.33/min [3520000], rate=37965.13/min [3530000], rate=38025.13/min [3540000], rate=38084.99/min [3550000], rate=38144.70/min [3560000], rate=38204.26/min [3570000], rate=38270.50/min [3580000], rate=38336.61/min [3590000], rate=38402.57/min [3600000], rate=38468.39/min [3610000], rate=38540.93/min [3620000], rate=38606.47/min [3630000], rate=38665.01/min [3640000], rate=38675.40/min [3650000], rate=38699.42/min [3660000], rate=38723.33/min [3670000], rate=38747.14/min [3680000], rate=38764.04/min [3690000], rate=38787.67/min [3700000], rate=38811.19/min [3710000], rate=38821.07/min [3720000], rate=38837.65/min [3730000], rate=38854.17/min [3740000], rate=38870.60/min [3750000], rate=38893.69/min [3760000], rate=38896.55/min [3770000], rate=38912.78/min [3780000], rate=38935.62/min rate=30264.39/min [2700000], rate=30303.03/min [2710000], rate=30341.48/min [2720000], rate=30374.09/min [2730000], rate=30406.53/min [2740000], rate=30450.08/min [2750000], rate=30499.08/min [2760000], rate=30542.24/min [2770000], rate=30590.83/min [2780000], rate=30639.24/min [2790000], rate=30687.44/min [2800000], rate=30735.46/min [2810000], rate=30777.66/min [2820000], rate=30830.90/min [2830000], rate=30878.34/min [2840000], rate=30931.20/min [2850000], rate=30983.87/min [2860000], rate=31030.74/min [2870000], rate=31094.26/min [2880000], rate=31146.36/min [2890000], rate=31209.50/min [2900000], rate=31261.23/min [2910000], rate=31307.15/min [2920000], rate=31358.51/min [2930000], rate=31404.07/min [2940000], rate=31460.67/min [2950000], rate=31511.48/min [2960000], rate=31562.11/min [2970000], rate=31618.17/min [2980000], rate=31674.05/min [2990000], rate=31718.53/min [3000000], rate=31774.05/min [3010000], rate=31829.40/min [3020000], rate=31878.96/min [3030000], rate=31933.95/min [3040000], rate=31994.39/min [3050000], rate=32049.04/min [3060000], rate=32109.13/min [3070000], rate=32174.67/min [3080000], rate=32234.43/min [3090000], rate=32294.03/min [3100000], rate=32364.71/min [3110000], rate=32429.61/min [3120000], rate=32494.36/min [3130000], rate=32558.95/min [3140000], rate=32623.38/min [3150000], rate=32693.31/min [3160000], rate=32757.43/min [3170000], rate=32827.06/min [3180000], rate=32890.88/min [3190000], rate=32960.22/min [3200000], rate=33029.42/min [3210000], rate=33058.70/min [3220000], rate=33082.19/min [3230000], rate=33116.88/min [3240000], rate=33140.13/min [3250000], rate=33168.91/min [3260000], rate=33197.56/min [3270000], rate=33237.34/min [3280000], rate=33265.72/min [3290000], rate=33299.60/min [3300000], rate=33344.56/min [3310000], rate=33378.15/min [3320000], rate=33411.61/min [3330000], rate=33450.53/min [3340000], rate=33483.71/min [3350000], rate=33522.35/min [3360000], rate=33566.43/min [3370000], rate=33604.79/min [3380000], rate=33643.00/min [3390000], rate=33692.23/min [3400000], rate=33735.74/min [3410000], rate=33779.10/min [3420000], rate=33822.32/min [3430000], rate=33865.39/min [3440000], rate=33908.33/min [3450000], rate=33951.12/min [3460000], rate=33993.78/min [3470000], rate=34041.86/min [3480000], rate=34078.67/min [3490000], rate=34126.47/min [3500000], rate=34168.56/min [3510000], rate=34210.53/min [3520000], rate=34257.91/min [3530000], rate=34305.15/min [3540000], rate=34357.81/min [3550000], rate=34404.78/min [3560000], rate=34446.06/min [3570000], rate=34492.75/min [3580000], rate=34539.32/min [3590000], rate=34591.30/min [3600000], rate=34643.14/min [3610000], rate=34694.86/min [3620000], rate=34746.44/min [3630000], rate=34797.89/min [3640000], rate=34854.77/min [3650000], rate=34911.53/min [3660000], rate=34962.59/min [3670000], rate=35019.08/min [3680000], rate=35075.46/min [3690000], rate=35131.70/min [3700000], rate=35187.83/min [3710000], rate=35243.83/min [3720000], rate=35305.28/min [3730000], rate=35366.62/min [3740000], rate=35422.26/min [3750000], rate=35483.36/min [3760000], rate=35544.35/min [3770000], rate=35599.62/min [3780000], rate=35660.38/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.ytuUpZ3bhu/ctat_genome_lib_build_dir --filt_file /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 0.00 reads per min processed... 12000000.00 reads per min processed... 18000000.00 reads per min processed... 12000000.00 reads per min processed... 15000000.00 reads per min processed... 12000000.00 reads per min processed... 14000000.00 reads per min processed... 9600000.00 reads per min processed... 7714285.71 reads per min processed... 6666666.67 reads per min processed... 6000000.00 reads per min processed... 6000000.00 reads per min processed... 5571428.57 reads per min processed... 5250000.00 reads per min processed... 5294117.65 reads per min processed... 5052631.58 reads per min processed... 5100000.00 reads per min processed... 4909090.91 reads per min processed... 4956521.74 reads per min processed... 4800000.00 reads per min processed... 4846153.85 reads per min processed... 4714285.71 reads per min processed... 4758620.69 reads per min processed... 4645161.29 reads per min processed... 4687500.00 reads per min processed... 4588235.29 reads per min processed... 4628571.43 reads per min processed... 4540540.54 reads per min processed... 4578947.37 reads per min processed... 4390243.90 reads per min processed... 4428571.43 reads per min processed... 4465116.28 reads per min processed... 4400000.00 reads per min processed... 4434782.61 reads per min processed... 4375000.00 reads per min processed... 4408163.27 reads per min processed... 4352941.18 reads per min processed... 4384615.38 reads per min processed... 4333333.33 reads per min processed... 4363636.36 reads per min processed... 4392857.14 reads per min processed... 4344827.59 reads per min processed... 4372881.36 reads per min processed... 4327868.85 reads per min processed... 4354838.71 reads per min processed... 4312500.00 reads per min processed... 4338461.54 reads per min processed... 4363636.36 reads per min processed... 4388059.70 reads per min processed... 4347826.09 reads per min processed... 4371428.57 reads per min processed... 4333333.33 reads per min processed... 4356164.38 reads per min processed... 4378378.38 reads per min processed... 4342105.26 reads per min processed... 4363636.36 reads per min processed... 4384615.38 reads per min processed... 4350000.00 reads per min processed... 4370370.37 reads per min processed... 4390243.90 reads per min processed... 4409638.55 reads per min processed... 4376470.59 reads per min processed... 4395348.84 reads per min processed... 4413793.10 reads per min processed... 4431818.18 reads per min processed... 4449438.20 reads per min processed... 4516853.93 reads per min processed... 4533333.33 reads per min processed... 4600000.00 reads per min processed... 4615384.62 reads per min processed... 4630434.78 reads per min processed... 4645161.29 reads per min processed... 4610526.32 reads per min processed... 4625000.00 reads per min processed... 4591836.73 reads per min processed... 4606060.61 reads per min processed... 4620000.00 reads per min processed... 4588235.29 reads per min processed... 4601941.75 reads per min processed... 4615384.62 reads per min processed... 4628571.43 reads per min processed... 4598130.84 reads per min processed... 4611111.11 reads per min processed... 4623853.21 reads per min processed... 4594594.59 reads per min processed... 4607142.86 reads per min processed... 4578947.37 reads per min processed... 4591304.35 reads per min processed... 4603448.28 reads per min processed... 4576271.19 reads per min processed... 4588235.29 reads per min processed... 4600000.00 reads per min processed... 4611570.25 reads per min processed... 4585365.85 reads per min processed... 4596774.19 reads per min processed... 4608000.00 reads per min processed... 4582677.17 reads per min processed... 4593750.00 reads per min processed... 4604651.16 reads per min processed... 4580152.67 reads per min processed... 4590909.09 reads per min processed... 4601503.76 reads per min processed... 4577777.78 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.ytuUpZ3bhu/1173_LV7_T1_RNA_SLD_01_A23T55JLT4_1.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.ytuUpZ3bhu/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -4738371.890252 EM: Round [1] log likelihood: -4737877.034152 EM: Round [2] log likelihood: -4737699.303038 EM: Round [3] log likelihood: -4737615.501176 EM: Round [4] log likelihood: -4737570.756840 EM: Round [5] log likelihood: -4737545.093642 EM: Round [6] log likelihood: -4737529.533362 EM: Round [7] log likelihood: -4737519.601788 EM: Round [8] log likelihood: -4737512.943998 EM: Round [9] log likelihood: -4737508.270874 EM: Round [10] log likelihood: -4737504.851100 EM: Round [11] log likelihood: -4737502.255131 EM: Round [12] log likelihood: -4737500.221848 EM: Round [13] log likelihood: -4737498.586968 EM: Round [14] log likelihood: -4737497.243522 EM: Round [15] log likelihood: -4737496.119481 EM: Round [16] log likelihood: -4737495.164782 EM: Round [17] log likelihood: -4737494.343610 EM: Round [18] log likelihood: -4737493.629675 EM: Round [19] log likelihood: -4737493.003237 EM: Round [20] log likelihood: -4737492.449182 EM: Round [21] log likelihood: -4737491.955735 EM: Round [22] log likelihood: -4737491.513579 EM: Round [23] log likelihood: -4737491.115246 EM: Round [24] log likelihood: -4737490.754671 EM: Round [25] log likelihood: -4737490.426875 EM: Round [26] log likelihood: -4737490.127732 EM: Round [27] log likelihood: -4737489.853788 EM: Round [28] log likelihood: -4737489.602128 EM: Round [29] log likelihood: -4737489.370274 EM: Round [30] log likelihood: -4737489.156103 EM: Round [31] log likelihood: -4737488.957787 EM: Round [32] log likelihood: -4737488.773741 EM: Round [33] log likelihood: -4737488.602581 EM: Round [34] log likelihood: -4737488.443099 EM: Round [35] log likelihood: -4737488.294228 EM: Round [36] log likelihood: -4737488.155028 EM: Round [37] log likelihood: -4737488.024665 EM: Round [38] log likelihood: -4737487.902394 EM: Round [39] log likelihood: -4737487.787553 EM: Round [40] log likelihood: -4737487.679546 EM: Round [41] log likelihood: -4737487.577839 EM: Round [42] log likelihood: -4737487.481952 EM: Round [43] log likelihood: -4737487.391448 EM: Round [44] log likelihood: -4737487.305934 EM: Round [45] log likelihood: -4737487.225052 EM: Round [46] log likelihood: -4737487.148478 EM: Round [47] log likelihood: -4737487.075914 EM: Round [48] log likelihood: -4737487.007091 EM: Round [49] log likelihood: -4737486.941759 EM: Round [50] log likelihood: -4737486.879694 EM: Round [51] log likelihood: -4737486.820684 EM: Round [52] log likelihood: -4737486.764540 EM: Round [53] log likelihood: -4737486.711084 EM: Round [54] log likelihood: -4737486.660153 EM: Round [55] log likelihood: -4737486.611596 EM: Round [56] log likelihood: -4737486.565275 EM: Round [57] log likelihood: -4737486.521060 EM: Round [58] log likelihood: -4737486.478830 EM: Round [59] log likelihood: -4737486.438476 EM: Round [60] log likelihood: -4737486.399892 EM: Round [61] log likelihood: -4737486.362983 EM: Round [62] log likelihood: -4737486.327658 EM: Round [63] log likelihood: -4737486.293834 EM: Round [64] log likelihood: -4737486.261433 EM: Round [65] log likelihood: -4737486.230380 EM: Round [66] log likelihood: -4737486.200607 EM: Round [67] log likelihood: -4737486.172049 EM: Round [68] log likelihood: -4737486.144647 EM: Round [69] log likelihood: -4737486.118343 EM: Round [70] log likelihood: -4737486.093083 EM: Round [71] log likelihood: -4737486.068819 EM: Round [72] log likelihood: -4737486.045502 EM: Round [73] log likelihood: -4737486.023088 EM: Round [74] log likelihood: -4737486.001534 EM: Round [75] log likelihood: -4737485.980802 EM: Round [76] log likelihood: -4737485.960854 EM: Round [77] log likelihood: -4737485.941655 EM: Round [78] log likelihood: -4737485.923170 EM: Round [79] log likelihood: -4737485.905369 EM: Round [80] log likelihood: -4737485.888221 EM: Round [81] log likelihood: -4737485.871698 EM: Round [82] log likelihood: -4737485.855773 EM: Round [83] log likelihood: -4737485.840421 EM: Round [84] log likelihood: -4737485.825617 EM: Round [85] log likelihood: -4737485.811338 EM: Round [86] log likelihood: -4737485.797563 EM: Round [87] log likelihood: -4737485.784270 EM: Round [88] log likelihood: -4737485.771440 EM: Round [89] log likelihood: -4737485.759054 EM: Round [90] log likelihood: -4737485.747093 EM: Round [91] log likelihood: -4737485.735542 EM: Round [92] log likelihood: -4737485.724383 EM: Round [93] log likelihood: -4737485.713602 EM: Round [94] log likelihood: -4737485.703183 EM: Round [95] log likelihood: -4737485.693112 EM: Round [96] log likelihood: -4737485.683376 EM: Round [97] log likelihood: -4737485.673961 EM: Round [98] log likelihood: -4737485.664857 EM: Round [99] log likelihood: -4737485.656050 EM: Round [100] log likelihood: -4737485.647530 EM: Round [101] log likelihood: -4737485.639285 EM: Round [102] log likelihood: -4737485.631307 EM: Round [103] log likelihood: -4737485.623584 EM: Round [104] log likelihood: -4737485.616107 EM: Round [105] log likelihood: -4737485.608868 EM: Round [106] log likelihood: -4737485.601858 EM: Round [107] log likelihood: -4737485.595068 EM: Round [108] log likelihood: -4737485.588491 EM: Round [109] log likelihood: -4737485.582119 EM: Round [110] log likelihood: -4737485.575944 EM: Round [111] log likelihood: -4737485.569960 EM: Round [112] log likelihood: -4737485.564160 EM: Round [113] log likelihood: -4737485.558538 EM: Round [114] log likelihood: -4737485.553087 EM: Round [115] log likelihood: -4737485.547802 EM: Round [116] log likelihood: -4737485.542676 EM: Round [117] log likelihood: -4737485.537705 EM: Round [118] log likelihood: -4737485.532883 EM: Round [119] log likelihood: -4737485.528205 EM: Round [120] log likelihood: -4737485.523666 EM: Round [121] log likelihood: -4737485.519261 EM: Round [122] log likelihood: -4737485.514987 EM: Round [123] log likelihood: -4737485.510838 EM: Round [124] log likelihood: -4737485.506810 EM: Round [125] log likelihood: -4737485.502900 EM: Round [126] log likelihood: -4737485.499104 EM: Round [127] log likelihood: -4737485.495418 EM: Round [128] log likelihood: -4737485.491838 EM: Round [129] log likelihood: -4737485.488361 EM: Round [130] log likelihood: -4737485.484984 EM: Round [131] log likelihood: -4737485.481703 EM: Round [132] log likelihood: -4737485.478516 EM: Round [133] log likelihood: -4737485.475418 EM: Round [134] log likelihood: -4737485.472409 EM: Round [135] log likelihood: -4737485.469484 EM: Round [136] log likelihood: -4737485.466641 EM: Round [137] log likelihood: -4737485.463878 EM: Round [138] log likelihood: -4737485.461192 EM: Round [139] log likelihood: -4737485.458581 EM: Round [140] log likelihood: -4737485.456042 EM: Round [141] log likelihood: -4737485.453573 EM: Round [142] log likelihood: -4737485.451172 EM: Round [143] log likelihood: -4737485.448837 EM: Round [144] log likelihood: -4737485.446566 EM: Round [145] log likelihood: -4737485.444357 EM: Round [146] log likelihood: -4737485.442208 EM: Round [147] log likelihood: -4737485.440117 EM: Round [148] log likelihood: -4737485.438083 EM: Round [149] log likelihood: -4737485.436104 EM: Round [150] log likelihood: -4737485.434178 EM: Round [151] log likelihood: -4737485.432303 EM: Round [152] log likelihood: -4737485.430479 EM: Round [153] log likelihood: -4737485.428704 EM: Round [154] log likelihood: -4737485.426975 EM: Round [155] log likelihood: -4737485.425293 EM: Round [156] log likelihood: -4737485.423655 EM: Round [157] log likelihood: -4737485.422060 EM: Round [158] log likelihood: -4737485.420508 EM: Round [159] log likelihood: -4737485.418996 EM: Round [160] log likelihood: -4737485.417523 EM: Round [161] log likelihood: -4737485.416090 EM: Round [162] log likelihood: -4737485.414693 EM: Round [163] log likelihood: -4737485.413333 EM: Round [164] log likelihood: -4737485.412008 EM: Round [165] log likelihood: -4737485.410717 EM: Round [166] log likelihood: -4737485.409460 EM: Round [167] log likelihood: -4737485.408235 EM: Round [168] log likelihood: -4737485.407042 EM: Round [169] log likelihood: -4737485.405879 EM: Round [170] log likelihood: -4737485.404746 EM: Round [171] log likelihood: -4737485.403641 EM: Round [172] log likelihood: -4737485.402565 EM: Round [173] log likelihood: -4737485.401517 EM: Round [174] log likelihood: -4737485.400494 EM: Round [175] log likelihood: -4737485.399498 EM: Round [176] log likelihood: -4737485.398527 EM: Round [177] log likelihood: -4737485.397580 EM: Round [178] log likelihood: -4737485.396657 EM: Round [179] log likelihood: -4737485.395757 EM: Round [180] log likelihood: -4737485.394880 EM: Round [181] log likelihood: -4737485.394025 EM: Round [182] log likelihood: -4737485.393191 EM: Round [183] log likelihood: -4737485.392377 EM: Round [184] log likelihood: -4737485.391584 EM: Round [185] log likelihood: -4737485.390811 EM: Round [186] log likelihood: -4737485.390056 EM: Round [187] log likelihood: -4737485.389321 EM: Round [188] log likelihood: -4737485.388603 EM: Round [189] log likelihood: -4737485.387903 EM: Round [190] log likelihood: -4737485.387220 EM: Round [191] log likelihood: -4737485.386554 EM: Round [192] log likelihood: -4737485.385905 EM: Round [193] log likelihood: -4737485.385271 EM: Round [194] log likelihood: -4737485.384652 EM: Round [195] log likelihood: -4737485.384049 EM: Round [196] log likelihood: -4737485.383460 EM: Round [197] log likelihood: -4737485.382886 EM: Round [198] log likelihood: -4737485.382325 EM: Round [199] log likelihood: -4737485.381778 EM: Round [200] log likelihood: -4737485.381245 EM: Round [201] log likelihood: -4737485.380724 EM: Round [202] log likelihood: -4737485.380215 EM: Round [203] log likelihood: -4737485.379719 EM: Round [204] log likelihood: -4737485.379235 EM: Round [205] log likelihood: -4737485.378762 EM: Round [206] log likelihood: -4737485.378301 EM: Round [207] log likelihood: -4737485.377850 EM: Round [208] log likelihood: -4737485.377410 EM: Round [209] log likelihood: -4737485.376981 EM: Round [210] log likelihood: -4737485.376562 EM: Round [211] log likelihood: -4737485.376153 EM: Round [212] log likelihood: -4737485.375754 EM: Round [213] log likelihood: -4737485.375364 EM: Round [214] log likelihood: -4737485.374983 EM: Round [215] log likelihood: -4737485.374611 EM: Round [216] log likelihood: -4737485.374248 EM: Round [217] log likelihood: -4737485.373893 EM: Round [218] log likelihood: -4737485.373547 EM: Round [219] log likelihood: -4737485.373209 EM: Round [220] log likelihood: -4737485.372879 EM: Round [221] log likelihood: -4737485.372556 EM: Round [222] log likelihood: -4737485.372241 EM: Round [223] log likelihood: -4737485.371934 EM: Round [224] log likelihood: -4737485.371633 EM: Round [225] log likelihood: -4737485.371340 EM: Round [226] log likelihood: -4737485.371053 EM: Round [227] log likelihood: -4737485.370773 EM: Round [228] log likelihood: -4737485.370500 EM: Round [229] log likelihood: -4737485.370232 EM: Round [230] log likelihood: -4737485.369971 EM: Round [231] log likelihood: -4737485.369716 EM: Round [232] log likelihood: -4737485.369467 EM: Round [233] log likelihood: -4737485.369224 EM: Round [234] log likelihood: -4737485.368986 EM: Round [235] log likelihood: -4737485.368754 EM: Round [236] log likelihood: -4737485.368527 EM: Round [237] log likelihood: -4737485.368305 EM: Round [238] log likelihood: -4737485.368088 EM: Round [239] log likelihood: -4737485.367876 EM: Round [240] log likelihood: -4737485.367669 EM: Round [241] log likelihood: -4737485.367467 EM: Round [242] log likelihood: -4737485.367269 EM: Round [243] log likelihood: -4737485.367076 EM: Round [244] log likelihood: -4737485.366887 EM: Round [245] log likelihood: -4737485.366703 EM: Round [246] log likelihood: -4737485.366522 EM: Round [247] log likelihood: -4737485.366346 EM: Round [248] log likelihood: -4737485.366174 EM: Round [249] log likelihood: -4737485.366006 EM: Round [250] log likelihood: -4737485.365841 EM: Round [251] log likelihood: -4737485.365680 EM: Round [252] log likelihood: -4737485.365523 EM: Round [253] log likelihood: -4737485.365369 EM: Round [254] log likelihood: -4737485.365219 EM: Round [255] log likelihood: -4737485.365072 EM: Round [256] log likelihood: -4737485.364928 EM: Round [257] log likelihood: -4737485.364788 EM: Round [258] log likelihood: -4737485.364651 EM: Round [259] log likelihood: -4737485.364517 EM: Round [260] log likelihood: -4737485.364385 EM: Round [261] log likelihood: -4737485.364257 EM: Round [262] log likelihood: -4737485.364132 EM: Round [263] log likelihood: -4737485.364009 EM: Round [264] log likelihood: -4737485.363889 EM: Round [265] log likelihood: -4737485.363772 EM: Round [266] log likelihood: -4737485.363657 EM: Round [267] log likelihood: -4737485.363545 EM: Round [268] log likelihood: -4737485.363436 EM: Round [269] log likelihood: -4737485.363328 EM: Round [270] log likelihood: -4737485.363224 EM: Round [271] log likelihood: -4737485.363121 EM: Round [272] log likelihood: -4737485.363021 EM: Round [273] log likelihood: -4737485.362923 EM: Stopping iterations at round 273 due to insufficient improvement in likelihood. EM: Starting log likelihood: -4735517.685220 EM: Round [1] log likelihood: -4735121.534906 EM: Round [2] log likelihood: -4734982.929668 EM: Round [3] log likelihood: -4734918.085964 EM: Round [4] log likelihood: -4734883.696958 EM: Round [5] log likelihood: -4734864.156626 EM: Round [6] log likelihood: -4734852.451528 EM: Round [7] log likelihood: -4734845.090467 EM: Round [8] log likelihood: -4734840.240285 EM: Round [9] log likelihood: -4734836.900322 EM: Round [10] log likelihood: -4734834.504853 EM: Round [11] log likelihood: -4734832.723117 EM: Round [12] log likelihood: -4734831.355283 EM: Round [13] log likelihood: -4734830.276583 EM: Round [14] log likelihood: -4734829.406494 EM: Round [15] log likelihood: -4734828.691310 EM: Round [16] log likelihood: -4734828.094070 EM: Round [17] log likelihood: -4734827.588589 EM: Round [18] log likelihood: -4734827.155840 EM: Round [19] log likelihood: -4734826.781675 EM: Round [20] log likelihood: -4734826.455368 EM: Round [21] log likelihood: -4734826.168646 EM: Round [22] log likelihood: -4734825.915028 EM: Round [23] log likelihood: -4734825.689368 EM: Round [24] log likelihood: -4734825.487528 EM: Round [25] log likelihood: -4734825.306146 EM: Round [26] log likelihood: -4734825.142458 EM: Round [27] log likelihood: -4734824.994173 EM: Round [28] log likelihood: -4734824.859375 EM: Round [29] log likelihood: -4734824.736449 EM: Round [30] log likelihood: -4734824.624023 EM: Round [31] log likelihood: -4734824.520923 EM: Round [32] log likelihood: -4734824.426142 EM: Round [33] log likelihood: -4734824.338807 EM: Round [34] log likelihood: -4734824.258159 EM: Round [35] log likelihood: -4734824.183537 EM: Round [36] log likelihood: -4734824.114358 EM: Round [37] log likelihood: -4734824.050111 EM: Round [38] log likelihood: -4734823.990343 EM: Round [39] log likelihood: -4734823.934654 EM: Round [40] log likelihood: -4734823.882685 EM: Round [41] log likelihood: -4734823.834119 EM: Round [42] log likelihood: -4734823.788669 EM: Round [43] log likelihood: -4734823.746081 EM: Round [44] log likelihood: -4734823.706124 EM: Round [45] log likelihood: -4734823.668590 EM: Round [46] log likelihood: -4734823.633293 EM: Round [47] log likelihood: -4734823.600063 EM: Round [48] log likelihood: -4734823.568745 EM: Round [49] log likelihood: -4734823.539200 EM: Round [50] log likelihood: -4734823.511302 EM: Round [51] log likelihood: -4734823.484933 EM: Round [52] log likelihood: -4734823.459988 EM: Round [53] log likelihood: -4734823.436370 EM: Round [54] log likelihood: -4734823.413990 EM: Round [55] log likelihood: -4734823.392766 EM: Round [56] log likelihood: -4734823.372624 EM: Round [57] log likelihood: -4734823.353495 EM: Round [58] log likelihood: -4734823.335314 EM: Round [59] log likelihood: -4734823.318024 EM: Round [60] log likelihood: -4734823.301570 EM: Round [61] log likelihood: -4734823.285903 EM: Round [62] log likelihood: -4734823.270974 EM: Round [63] log likelihood: -4734823.256742 EM: Round [64] log likelihood: -4734823.243167 EM: Round [65] log likelihood: -4734823.230210 EM: Round [66] log likelihood: -4734823.217838 EM: Round [67] log likelihood: -4734823.206019 EM: Round [68] log likelihood: -4734823.194721 EM: Round [69] log likelihood: -4734823.183918 EM: Round [70] log likelihood: -4734823.173583 EM: Round [71] log likelihood: -4734823.163691 EM: Round [72] log likelihood: -4734823.154219 EM: Round [73] log likelihood: -4734823.145146 EM: Round [74] log likelihood: -4734823.136452 EM: Round [75] log likelihood: -4734823.128117 EM: Round [76] log likelihood: -4734823.120124 EM: Round [77] log likelihood: -4734823.112456 EM: Round [78] log likelihood: -4734823.105097 EM: Round [79] log likelihood: -4734823.098032 EM: Round [80] log likelihood: -4734823.091248 EM: Round [81] log likelihood: -4734823.084731 EM: Round [82] log likelihood: -4734823.078469 EM: Round [83] log likelihood: -4734823.072449 EM: Round [84] log likelihood: -4734823.066662 EM: Round [85] log likelihood: -4734823.061096 EM: Round [86] log likelihood: -4734823.055741 EM: Round [87] log likelihood: -4734823.050587 EM: Round [88] log likelihood: -4734823.045627 EM: Round [89] log likelihood: -4734823.040852 EM: Round [90] log likelihood: -4734823.036253 EM: Round [91] log likelihood: -4734823.031822 EM: Round [92] log likelihood: -4734823.027554 EM: Round [93] log likelihood: -4734823.023440 EM: Round [94] log likelihood: -4734823.019475 EM: Round [95] log likelihood: -4734823.015651 EM: Round [96] log likelihood: -4734823.011964 EM: Round [97] log likelihood: -4734823.008407 EM: Round [98] log likelihood: -4734823.004976 EM: Round [99] log likelihood: -4734823.001664 EM: Round [100] log likelihood: -4734822.998468 EM: Round [101] log likelihood: -4734822.995383 EM: Round [102] log likelihood: -4734822.992403 EM: Round [103] log likelihood: -4734822.989526 EM: Round [104] log likelihood: -4734822.986747 EM: Round [105] log likelihood: -4734822.984062 EM: Round [106] log likelihood: -4734822.981467 EM: Round [107] log likelihood: -4734822.978960 EM: Round [108] log likelihood: -4734822.976536 EM: Round [109] log likelihood: -4734822.974193 EM: Round [110] log likelihood: -4734822.971927 EM: Round [111] log likelihood: -4734822.969736 EM: Round [112] log likelihood: -4734822.967616 EM: Round [113] log likelihood: -4734822.965566 EM: Round [114] log likelihood: -4734822.963582 EM: Round [115] log likelihood: -4734822.961662 EM: Round [116] log likelihood: -4734822.959804 EM: Round [117] log likelihood: -4734822.958005 EM: Round [118] log likelihood: -4734822.956264 EM: Round [119] log likelihood: -4734822.954578 EM: Round [120] log likelihood: -4734822.952945 EM: Round [121] log likelihood: -4734822.951363 EM: Round [122] log likelihood: -4734822.949831 EM: Round [123] log likelihood: -4734822.948347 EM: Round [124] log likelihood: -4734822.946908 EM: Round [125] log likelihood: -4734822.945515 EM: Round [126] log likelihood: -4734822.944164 EM: Round [127] log likelihood: -4734822.942855 EM: Round [128] log likelihood: -4734822.941585 EM: Round [129] log likelihood: -4734822.940354 EM: Round [130] log likelihood: -4734822.939161 EM: Round [131] log likelihood: -4734822.938004 EM: Round [132] log likelihood: -4734822.936881 EM: Round [133] log likelihood: -4734822.935792 EM: Round [134] log likelihood: -4734822.934736 EM: Round [135] log likelihood: -4734822.933711 EM: Round [136] log likelihood: -4734822.932717 EM: Round [137] log likelihood: -4734822.931751 EM: Round [138] log likelihood: -4734822.930815 EM: Round [139] log likelihood: -4734822.929905 EM: Round [140] log likelihood: -4734822.929023 EM: Round [141] log likelihood: -4734822.928166 EM: Round [142] log likelihood: -4734822.927334 EM: Round [143] log likelihood: -4734822.926526 EM: Round [144] log likelihood: -4734822.925741 EM: Round [145] log likelihood: -4734822.924979 EM: Round [146] log likelihood: -4734822.924239 EM: Round [147] log likelihood: -4734822.923519 EM: Round [148] log likelihood: -4734822.922821 EM: Round [149] log likelihood: -4734822.922142 EM: Round [150] log likelihood: -4734822.921482 EM: Round [151] log likelihood: -4734822.920841 EM: Round [152] log likelihood: -4734822.920218 EM: Round [153] log likelihood: -4734822.919612 EM: Round [154] log likelihood: -4734822.919024 EM: Round [155] log likelihood: -4734822.918451 EM: Round [156] log likelihood: -4734822.917895 EM: Round [157] log likelihood: -4734822.917354 EM: Round [158] log likelihood: -4734822.916828 EM: Round [159] log likelihood: -4734822.916316 EM: Round [160] log likelihood: -4734822.915819 EM: Round [161] log likelihood: -4734822.915335 EM: Round [162] log likelihood: -4734822.914864 EM: Round [163] log likelihood: -4734822.914406 EM: Round [164] log likelihood: -4734822.913960 EM: Round [165] log likelihood: -4734822.913527 EM: Round [166] log likelihood: -4734822.913105 EM: Round [167] log likelihood: -4734822.912695 EM: Round [168] log likelihood: -4734822.912295 EM: Round [169] log likelihood: -4734822.911907 EM: Round [170] log likelihood: -4734822.911528 EM: Round [171] log likelihood: -4734822.911160 EM: Round [172] log likelihood: -4734822.910801 EM: Round [173] log likelihood: -4734822.910452 EM: Round [174] log likelihood: -4734822.910113 EM: Round [175] log likelihood: -4734822.909782 EM: Round [176] log likelihood: -4734822.909460 EM: Round [177] log likelihood: -4734822.909146 EM: Round [178] log likelihood: -4734822.908841 EM: Round [179] log likelihood: -4734822.908543 EM: Round [180] log likelihood: -4734822.908253 EM: Round [181] log likelihood: -4734822.907971 EM: Round [182] log likelihood: -4734822.907696 EM: Round [183] log likelihood: -4734822.907428 EM: Round [184] log likelihood: -4734822.907167 EM: Round [185] log likelihood: -4734822.906913 EM: Round [186] log likelihood: -4734822.906666 EM: Round [187] log likelihood: -4734822.906424 EM: Round [188] log likelihood: -4734822.906189 EM: Round [189] log likelihood: -4734822.905960 EM: Round [190] log likelihood: -4734822.905737 EM: Round [191] log likelihood: -4734822.905519 EM: Round [192] log likelihood: -4734822.905307 EM: Round [193] log likelihood: -4734822.905100 EM: Round [194] log likelihood: -4734822.904898 EM: Round [195] log likelihood: -4734822.904702 EM: Round [196] log likelihood: -4734822.904510 EM: Round [197] log likelihood: -4734822.904323 EM: Round [198] log likelihood: -4734822.904141 EM: Round [199] log likelihood: -4734822.903964 EM: Round [200] log likelihood: -4734822.903790 EM: Round [201] log likelihood: -4734822.903622 EM: Round [202] log likelihood: -4734822.903457 EM: Round [203] log likelihood: -4734822.903296 EM: Round [204] log likelihood: -4734822.903140 EM: Round [205] log likelihood: -4734822.902987 EM: Round [206] log likelihood: -4734822.902838 EM: Round [207] log likelihood: -4734822.902692 EM: Round [208] log likelihood: -4734822.902551 EM: Round [209] log likelihood: -4734822.902412 EM: Round [210] log likelihood: -4734822.902277 EM: Round [211] log likelihood: -4734822.902146 EM: Round [212] log likelihood: -4734822.902017 EM: Round [213] log likelihood: -4734822.901892 EM: Round [214] log likelihood: -4734822.901769 EM: Round [215] log likelihood: -4734822.901650 EM: Round [216] log likelihood: -4734822.901534 EM: Round [217] log likelihood: -4734822.901420 EM: Round [218] log likelihood: -4734822.901309 EM: Round [219] log likelihood: -4734822.901201 EM: Round [220] log likelihood: -4734822.901095 EM: Round [221] log likelihood: -4734822.900992 EM: Round [222] log likelihood: -4734822.900891 EM: Round [223] log likelihood: -4734822.900793 EM: Stopping iterations at round 223 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.ytuUpZ3bhu/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.ytuUpZ3bhu/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.ytuUpZ3bhu/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 292772921 > /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.ytuUpZ3bhu/ctat_genome_lib_build_dir > /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.ytuUpZ3bhu/ctat_genome_lib_build_dir --annotate /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.ytuUpZ3bhu/ctat_genome_lib_build_dir -done, see /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.ytuUpZ3bhu/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 395, filtered: 2870) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.ytuUpZ3bhu/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.ytuUpZ3bhu/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000231426.7] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000180747.15] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000226049.3] WARNING, no entry stored in dbm for [ENSG00000260404.3] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000285600.1] WARNING, no entry stored in dbm for [ENSG00000279821.1] WARNING, no entry stored in dbm for [ENSG00000203413.3] WARNING, no entry stored in dbm for [ENSG00000285051.2] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [IGH.g@-ext] WARNING, no entry stored in dbm for [ENSG00000281896.1] WARNING, no entry stored in dbm for [ENSG00000282057.1] WARNING, no entry stored in dbm for [ENSG00000261329.6] WARNING, no entry stored in dbm for [ENSG00000214433.4] WARNING, no entry stored in dbm for [ENSG00000232386.9] WARNING, no entry stored in dbm for [ENSG00000249752.1] WARNING, no entry stored in dbm for [ENSG00000225292.2] WARNING, no entry stored in dbm for [ENSG00000250111.3] WARNING, no entry stored in dbm for [ENSG00000247157.7] WARNING, no entry stored in dbm for [ENSG00000257817.2] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000287411.1] WARNING, no entry stored in dbm for [ENSG00000226310.1] WARNING, no entry stored in dbm for [ENSG00000211459.2] WARNING, no entry stored in dbm for [ENSG00000204622.11] WARNING, no entry stored in dbm for [ENSG00000235290.1] WARNING, no entry stored in dbm for [ENSG00000204622.11] WARNING, no entry stored in dbm for [ENSG00000225851.1] WARNING, no entry stored in dbm for [ENSG00000260827.1] WARNING, no entry stored in dbm for [ENSG00000281103.2] WARNING, no entry stored in dbm for [ENSG00000272235.1] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000243289.1] WARNING, no entry stored in dbm for [ENSG00000270094.1] WARNING, no entry stored in dbm for [ENSG00000274615.1] WARNING, no entry stored in dbm for [ENSG00000284627.1] WARNING, no entry stored in dbm for [ENSG00000248618.1] WARNING, no entry stored in dbm for [ENSG00000263345.1] WARNING, no entry stored in dbm for [ENSG00000268163.1] WARNING, no entry stored in dbm for [ENSG00000242435.1] WARNING, no entry stored in dbm for [ENSG00000067601.8] WARNING, no entry stored in dbm for [ENSG00000275139.1] WARNING, no entry stored in dbm for [ENSG00000234771.3] WARNING, no entry stored in dbm for [ENSG00000232527.8] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000276758.1] WARNING, no entry stored in dbm for [ENSG00000211459.2] WARNING, no entry stored in dbm for [ENSG00000230795.3] WARNING, no entry stored in dbm for [ENSG00000228078.1] WARNING, no entry stored in dbm for [ENSG00000272645.3] WARNING, no entry stored in dbm for [ENSG00000234712.1] WARNING, no entry stored in dbm for [ENSG00000203825.4] WARNING, no entry stored in dbm for [ENSG00000272150.5] WARNING, no entry stored in dbm for [ENSG00000250111.3] WARNING, no entry stored in dbm for [ENSG00000205212.5] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000284783.1] WARNING, no entry stored in dbm for [ENSG00000285035.1] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000245904.4] WARNING, no entry stored in dbm for [ENSG00000273314.1] WARNING, no entry stored in dbm for [ENSG00000283662.1] WARNING, no entry stored in dbm for [ENSG00000236540.7] WARNING, no entry stored in dbm for [ENSG00000251595.7] WARNING, no entry stored in dbm for [ENSG00000267606.1] WARNING, no entry stored in dbm for [ENSG00000237234.7] WARNING, no entry stored in dbm for [ENSG00000225205.5] WARNING, no entry stored in dbm for [ENSG00000285888.1] WARNING, no entry stored in dbm for [ENSG00000287225.1] WARNING, no entry stored in dbm for [ENSG00000229807.12] WARNING, no entry stored in dbm for [ENSG00000260128.6] WARNING, no entry stored in dbm for [ENSG00000180438.15] WARNING, no entry stored in dbm for [ENSG00000197308.9] WARNING, no entry stored in dbm for [ENSG00000284977.2] WARNING, no entry stored in dbm for [ENSG00000229348.1] WARNING, no entry stored in dbm for [ENSG00000231312.7] WARNING, no entry stored in dbm for [ENSG00000234577.1] WARNING, no entry stored in dbm for [ENSG00000258667.2] WARNING, no entry stored in dbm for [ENSG00000234106.3] WARNING, no entry stored in dbm for [ENSG00000263821.1] WARNING, no entry stored in dbm for [ENSG00000251667.1] WARNING, no entry stored in dbm for [ENSG00000246465.1] WARNING, no entry stored in dbm for [ENSG00000261490.1] WARNING, no entry stored in dbm for [ENSG00000261490.1] WARNING, no entry stored in dbm for [ENSG00000256827.1] WARNING, no entry stored in dbm for [ENSG00000203645.2] WARNING, no entry stored in dbm for [ENSG00000228463.10] WARNING, no entry stored in dbm for [ENSG00000253541.1] WARNING, no entry stored in dbm for [ENSG00000257259.3] WARNING, no entry stored in dbm for [ENSG00000237787.5] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000227681.5] WARNING, no entry stored in dbm for [ENSG00000243609.1] WARNING, no entry stored in dbm for [ENSG00000241913.1] WARNING, no entry stored in dbm for [ENSG00000235354.1] WARNING, no entry stored in dbm for [ENSG00000270449.1] WARNING, no entry stored in dbm for [ENSG00000278909.1] WARNING, no entry stored in dbm for [ENSG00000263558.2] WARNING, no entry stored in dbm for [ENSG00000266192.3] WARNING, no entry stored in dbm for [ENSG00000208892.1] WARNING, no entry stored in dbm for [ENSG00000225189.1] WARNING, no entry stored in dbm for [ENSG00000225466.1] WARNING, no entry stored in dbm for [ENSG00000285835.1] WARNING, no entry stored in dbm for [ENSG00000273760.1] WARNING, no entry stored in dbm for [ENSG00000256615.1] WARNING, no entry stored in dbm for [ENSG00000279050.1] WARNING, no entry stored in dbm for [ENSG00000204261.9] WARNING, no entry stored in dbm for [ENSG00000215414.4] WARNING, no entry stored in dbm for [ENSG00000253298.2] WARNING, no entry stored in dbm for [ENSG00000286162.2] WARNING, no entry stored in dbm for [ENSG00000275131.3] WARNING, no entry stored in dbm for [ENSG00000254539.1] WARNING, no entry stored in dbm for [ENSG00000247774.7] WARNING, no entry stored in dbm for [ENSG00000261612.1] WARNING, no entry stored in dbm for [ENSG00000259884.1] WARNING, no entry stored in dbm for [ENSG00000106133.18] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000259813.1] WARNING, no entry stored in dbm for [ENSG00000276206.1] WARNING, no entry stored in dbm for [ENSG00000238222.3] WARNING, no entry stored in dbm for [ENSG00000283544.1] WARNING, no entry stored in dbm for [ENSG00000236854.2] WARNING, no entry stored in dbm for [ENSG00000280402.1] WARNING, no entry stored in dbm for [ENSG00000225282.1] WARNING, no entry stored in dbm for [ENSG00000279196.1] WARNING, no entry stored in dbm for [ENSG00000228063.2] WARNING, no entry stored in dbm for [ENSG00000242529.1] WARNING, no entry stored in dbm for [ENSG00000253983.3] WARNING, no entry stored in dbm for [ENSG00000229088.1] WARNING, no entry stored in dbm for [ENSG00000251432.7] WARNING, no entry stored in dbm for [ENSG00000263146.2] WARNING, no entry stored in dbm for [ENSG00000287356.1] WARNING, no entry stored in dbm for [ENSG00000249500.1] WARNING, no entry stored in dbm for [ENSG00000264247.2] WARNING, no entry stored in dbm for [ENSG00000256690.1] WARNING, no entry stored in dbm for [ENSG00000260776.6] WARNING, no entry stored in dbm for [ENSG00000260941.1] WARNING, no entry stored in dbm for [ENSG00000254266.6] WARNING, no entry stored in dbm for [ENSG00000286675.1] WARNING, no entry stored in dbm for [ENSG00000286675.1] WARNING, no entry stored in dbm for [ENSG00000250412.1] WARNING, no entry stored in dbm for [ENSG00000260109.1] WARNING, no entry stored in dbm for [ENSG00000259746.1] WARNING, no entry stored in dbm for [ENSG00000230651.8] WARNING, no entry stored in dbm for [ENSG00000250133.2] WARNING, no entry stored in dbm for [ENSG00000255856.2] WARNING, no entry stored in dbm for [ENSG00000235655.3] WARNING, no entry stored in dbm for [ENSG00000218502.3] WARNING, no entry stored in dbm for [ENSG00000272645.3] WARNING, no entry stored in dbm for [ENSG00000242808.10] WARNING, no entry stored in dbm for [ENSG00000257277.2] WARNING, no entry stored in dbm for [ENSG00000198468.9] WARNING, no entry stored in dbm for [ENSG00000179743.4] WARNING, no entry stored in dbm for [ENSG00000225393.1] WARNING, no entry stored in dbm for [ENSG00000262831.1] WARNING, no entry stored in dbm for [ENSG00000275871.1] WARNING, no entry stored in dbm for [ENSG00000186704.9] WARNING, no entry stored in dbm for [ENSG00000186704.9] WARNING, no entry stored in dbm for [ENSG00000268119.6] WARNING, no entry stored in dbm for [ENSG00000253833.1] WARNING, no entry stored in dbm for [ENSG00000231560.1] WARNING, no entry stored in dbm for [ENSG00000286867.1] WARNING, no entry stored in dbm for [ENSG00000280927.1] WARNING, no entry stored in dbm for [ENSG00000255874.2] WARNING, no entry stored in dbm for [ENSG00000237773.7] WARNING, no entry stored in dbm for [ENSG00000271382.1] WARNING, no entry stored in dbm for [ENSG00000283541.1] WARNING, no entry stored in dbm for [ENSG00000260896.6] WARNING, no entry stored in dbm for [ENSG00000168405.17] WARNING, no entry stored in dbm for [ENSG00000264334.1] WARNING, no entry stored in dbm for [ENSG00000268034.1] WARNING, no entry stored in dbm for [ENSG00000243389.1] WARNING, no entry stored in dbm for [ENSG00000234567.1] WARNING, no entry stored in dbm for [ENSG00000255856.2] WARNING, no entry stored in dbm for [ENSG00000223745.8] WARNING, no entry stored in dbm for [ENSG00000244144.1] WARNING, no entry stored in dbm for [ENSG00000224186.8] WARNING, no entry stored in dbm for [ENSG00000271717.1] WARNING, no entry stored in dbm for [ENSG00000233967.7] WARNING, no entry stored in dbm for [ENSG00000233967.7] WARNING, no entry stored in dbm for [ENSG00000279407.1] WARNING, no entry stored in dbm for [ENSG00000256591.5] WARNING, no entry stored in dbm for [ENSG00000256591.5] WARNING, no entry stored in dbm for [ENSG00000233995.1] WARNING, no entry stored in dbm for [ENSG00000250539.1] WARNING, no entry stored in dbm for [ENSG00000213239.3] WARNING, no entry stored in dbm for [ENSG00000287315.1] WARNING, no entry stored in dbm for [ENSG00000231702.2] WARNING, no entry stored in dbm for [ENSG00000242176.1] WARNING, no entry stored in dbm for [ENSG00000217801.10] WARNING, no entry stored in dbm for [ENSG00000271551.2] WARNING, no entry stored in dbm for [ENSG00000258034.1] WARNING, no entry stored in dbm for [ENSG00000258878.1] WARNING, no entry stored in dbm for [ENSG00000247970.2] WARNING, no entry stored in dbm for [ENSG00000230537.2] WARNING, no entry stored in dbm for [ENSG00000286116.1] WARNING, no entry stored in dbm for [ENSG00000262619.2] WARNING, no entry stored in dbm for [ENSG00000220685.3] WARNING, no entry stored in dbm for [ENSG00000216781.2] WARNING, no entry stored in dbm for [ENSG00000234227.1] WARNING, no entry stored in dbm for [ENSG00000283098.2] WARNING, no entry stored in dbm for [ENSG00000201807.1] WARNING, no entry stored in dbm for [ENSG00000286787.1] WARNING, no entry stored in dbm for [ENSG00000279616.1] WARNING, no entry stored in dbm for [ENSG00000287918.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000280195.1] WARNING, no entry stored in dbm for [ENSG00000263707.1] WARNING, no entry stored in dbm for [ENSG00000223804.5] WARNING, no entry stored in dbm for [ENSG00000215861.6] WARNING, no entry stored in dbm for [ENSG00000275557.1] WARNING, no entry stored in dbm for [ENSG00000274423.1] WARNING, no entry stored in dbm for [ENSG00000205584.6] WARNING, no entry stored in dbm for [ENSG00000188101.5] WARNING, no entry stored in dbm for [ENSG00000287090.1] WARNING, no entry stored in dbm for [ENSG00000235421.1] WARNING, no entry stored in dbm for [ENSG00000244627.5] WARNING, no entry stored in dbm for [ENSG00000253806.1] WARNING, no entry stored in dbm for [ENSG00000125631.7] WARNING, no entry stored in dbm for [ENSG00000278275.2] WARNING, no entry stored in dbm for [ENSG00000267920.1] WARNING, no entry stored in dbm for [ENSG00000259970.1] WARNING, no entry stored in dbm for [ENSG00000261613.2] WARNING, no entry stored in dbm for [ENSG00000288620.1] WARNING, no entry stored in dbm for [ENSG00000187953.10] WARNING, no entry stored in dbm for [ENSG00000270978.1] WARNING, no entry stored in dbm for [ENSG00000265936.1] WARNING, no entry stored in dbm for [ENSG00000214259.3] WARNING, no entry stored in dbm for [ENSG00000231359.3] WARNING, no entry stored in dbm for [ENSG00000213942.3] WARNING, no entry stored in dbm for [ENSG00000287462.1] WARNING, no entry stored in dbm for [ENSG00000259299.1] WARNING, no entry stored in dbm for [ENSG00000254951.7] WARNING, no entry stored in dbm for [ENSG00000254485.5] WARNING, no entry stored in dbm for [ENSG00000272800.3] WARNING, no entry stored in dbm for [ENSG00000268047.1] WARNING, no entry stored in dbm for [ENSG00000235972.1] WARNING, no entry stored in dbm for [ENSG00000269032.1] WARNING, no entry stored in dbm for [ENSG00000184319.16] WARNING, no entry stored in dbm for [ENSG00000267788.1] WARNING, no entry stored in dbm for [ENSG00000267105.1] WARNING, no entry stored in dbm for [ENSG00000230359.5] WARNING, no entry stored in dbm for [ENSG00000267383.7] WARNING, no entry stored in dbm for [ENSG00000282890.1] WARNING, no entry stored in dbm for [ENSG00000068781.21] WARNING, no entry stored in dbm for [ENSG00000216895.9] WARNING, no entry stored in dbm for [ENSG00000284649.1] WARNING, no entry stored in dbm for [ENSG00000261273.1] WARNING, no entry stored in dbm for [ENSG00000263343.1] WARNING, no entry stored in dbm for [ENSG00000280063.1] WARNING, no entry stored in dbm for [ENSG00000257403.2] WARNING, no entry stored in dbm for [ENSG00000284649.1] WARNING, no entry stored in dbm for [ENSG00000262292.2] WARNING, no entry stored in dbm for [ENSG00000244513.7] WARNING, no entry stored in dbm for [ENSG00000267009.6] WARNING, no entry stored in dbm for [ENSG00000264421.1] WARNING, no entry stored in dbm for [ENSG00000204929.13] WARNING, no entry stored in dbm for [ENSG00000224063.6] WARNING, no entry stored in dbm for [ENSG00000277458.1] WARNING, no entry stored in dbm for [ENSG00000189149.12] WARNING, no entry stored in dbm for [ENSG00000261490.1] WARNING, no entry stored in dbm for [ENSG00000267623.3] WARNING, no entry stored in dbm for [ENSG00000268163.1] WARNING, no entry stored in dbm for [ENSG00000228113.7] WARNING, no entry stored in dbm for [ENSG00000284130.1] WARNING, no entry stored in dbm for [ENSG00000284060.1] WARNING, no entry stored in dbm for [ENSG00000266192.3] WARNING, no entry stored in dbm for [ENSG00000245105.4] WARNING, no entry stored in dbm for [ENSG00000233473.2] * STAR-Fusion complete. See output: /tmp/nxf.ytuUpZ3bhu/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)