Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/03ce33e801a3095bc84207da4aa493/1173_CH0_T1_RNA_SLD_01_A23T55JLT4_2.arriba.fusions.filtered_pass_only.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/stage-fe242a7f-c5b9-4d3f-88fa-f3e739280d3a/45/503758169673f6b79761b4db9d3b84/dummy_file_fusioncatcher.txt
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/56/0b0ed93894ad7f613e4816cbd7faf8/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/09/75c31182ca2533022376dc64378eed/1173_CH0_T1_RNA_SLD_01_A23T55JLT4_2.starfusion.starfusion.fusion_predictions.filtered_pass_only.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/56/0b0ed93894ad7f613e4816cbd7faf8/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/rna/GRCh38/fusion_report_db
==> STAGING COMPLETE (6 inputs)

Running application...
MYB--ADGRB3
starfusion
arriba
SREBF2--NCLN
starfusion
arriba
DNMT1--ZFR2
starfusion
arriba
AP1M2--ZFR2
starfusion
TLK2P1--AC110079.1
starfusion
TLK2--AL669831.1
starfusion
MYO18B--IGL-@-ext
starfusion
GTF2F1--SCUBE1
arriba
MON1B--AC106733.1
arriba
MON1B--MON1B
arriba
NPHP3--ACAD11
arriba
PCDHA6--PCDHA13
arriba
PCDHA6--PCDHAC1
arriba
PCDHA6--PCDHAC2
arriba
MAN2B1--CACNA1A
arriba
MAN2B1--CCDC130
arriba

  0%|          | 0/16 [00:00<?, ?it/s]
Processing MYB--ADGRB3:   0%|          | 0/16 [00:00<?, ?it/s]
Processing MYB--ADGRB3:   6%|▋         | 1/16 [00:00<00:01,  9.11it/s]
Processing SREBF2--NCLN:   6%|▋         | 1/16 [00:00<00:01,  9.11it/s]
Processing SREBF2--NCLN:  12%|█▎        | 2/16 [00:00<00:01,  9.30it/s]
Processing DNMT1--ZFR2:  12%|█▎        | 2/16 [00:00<00:01,  9.30it/s] 
Processing DNMT1--ZFR2:  19%|█▉        | 3/16 [00:00<00:01,  9.32it/s]
Processing AP1M2--ZFR2:  19%|█▉        | 3/16 [00:00<00:01,  9.32it/s]
Processing AP1M2--ZFR2:  25%|██▌       | 4/16 [00:00<00:01,  9.37it/s]
Processing TLK2P1--AC110079.1:  25%|██▌       | 4/16 [00:00<00:01,  9.37it/s]
Processing TLK2P1--AC110079.1:  31%|███▏      | 5/16 [00:00<00:01,  9.37it/s]
Processing TLK2--AL669831.1:  31%|███▏      | 5/16 [00:00<00:01,  9.37it/s]  
Processing TLK2--AL669831.1:  38%|███▊      | 6/16 [00:00<00:01,  9.38it/s]
Processing MYO18B--IGL-@-ext:  38%|███▊      | 6/16 [00:00<00:01,  9.38it/s]
Processing MYO18B--IGL-@-ext:  44%|████▍     | 7/16 [00:00<00:00,  9.40it/s]
Processing GTF2F1--SCUBE1:  44%|████▍     | 7/16 [00:00<00:00,  9.40it/s]   
Processing GTF2F1--SCUBE1:  50%|█████     | 8/16 [00:00<00:00,  9.39it/s]
Processing MON1B--AC106733.1:  50%|█████     | 8/16 [00:00<00:00,  9.39it/s]
Processing MON1B--AC106733.1:  56%|█████▋    | 9/16 [00:00<00:00,  9.38it/s]
Processing MON1B--MON1B:  56%|█████▋    | 9/16 [00:00<00:00,  9.38it/s]     
Processing MON1B--MON1B:  62%|██████▎   | 10/16 [00:01<00:00,  9.39it/s]
Processing NPHP3--ACAD11:  62%|██████▎   | 10/16 [00:01<00:00,  9.39it/s]
Processing NPHP3--ACAD11:  69%|██████▉   | 11/16 [00:01<00:00,  9.31it/s]
Processing PCDHA6--PCDHA13:  69%|██████▉   | 11/16 [00:01<00:00,  9.31it/s]
Processing PCDHA6--PCDHA13:  75%|███████▌  | 12/16 [00:01<00:00,  9.27it/s]
Processing PCDHA6--PCDHAC1:  75%|███████▌  | 12/16 [00:01<00:00,  9.27it/s]
Processing PCDHA6--PCDHAC1:  81%|████████▏ | 13/16 [00:01<00:00,  9.25it/s]
Processing PCDHA6--PCDHAC2:  81%|████████▏ | 13/16 [00:01<00:00,  9.25it/s]
Processing PCDHA6--PCDHAC2:  88%|████████▊ | 14/16 [00:01<00:00,  9.24it/s]
Processing MAN2B1--CACNA1A:  88%|████████▊ | 14/16 [00:01<00:00,  9.24it/s]
Processing MAN2B1--CACNA1A:  94%|█████████▍| 15/16 [00:01<00:00,  9.22it/s]
Processing MAN2B1--CCDC130:  94%|█████████▍| 15/16 [00:01<00:00,  9.22it/s]
Processing MAN2B1--CCDC130: 100%|██████████| 16/16 [00:01<00:00,  9.20it/s]
Processing MAN2B1--CCDC130: 100%|██████████| 16/16 [00:01<00:00,  9.29it/s]
cat: fusion_report_db/DB-timestamp.txt: No such file or directory