[W::hts_idx_load3] The index file is older than the data file: 1173_CRL_T1_RNA_SLD_01_A23T55JLT4_2.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	282185143
Known Splicing Events:	277486496
Partial Novel Splicing Events:	1580144
Novel Splicing Events:	3036908
Filtered Splicing Events:	81595

Total splicing  Junctions:	559835
Known Splicing Junctions:	283507
Partial Novel Splicing Junctions:	175533
Novel Splicing Junctions:	100795

===================================================================
Create BED file ...
Create Interact file ...